TMEM55B ORF clone FXC07163

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Flexi ORF Clone FXC07163

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Clone info.

Species

human

Clone Name

pF1KE0207 Sequence (with vector) Restriction Map

Product ID

FXC07163

HaloTag Clone PID

FHC07163

ORF Sequence

DNA sequence (831 bp)
Protein sequence (277 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB528259]

Gene

KIEE0207

Symbol

TMEM55B

Description

transmembrane protein 55B, transcript variant 2

Original Clone ID

oc00907

Features of the cloned ORF sequence

Description

Length: 831 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 277 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS9551.1 6.2e-66 99.6 TMEM55B CCDS41911.1 4.4e-65 97.2 TMEM55B CCDS6252.1 1.7e-28 52.4 TMEM55A The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR019178 1 270 PF09788 Transmembrane protein 55A/B
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 212 CICCFLLGLLLAVTATGLAFGT 233 PRIMARY 22 2 241 GGIYAAWAFVILLAVLCLGRALY 263 PRIMARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_653169 277 609865 99.6 100.0 NP_001094284 284 609865 97.2 100.0 NP_061180 257 609864 52.4 100.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KE0207 Download

>KIEE0207  831 bp
ATGGCGGCAGACGGAGAGCGTTCCCCGCTGCTGTCTGAGCCCATCGACGGTGGCGCGGGC
GGCAACGGTTTAGTGGGGCCCGGCGGGAGTGGGGCTGGGCCCGGGGGAGGCCTGACCCCC
TCCGCACCACCGTACGGAGCCGCATTTCCCCCGTTTCCCGAGGGGCATCCAGCCGTGTTG
CCTGGGGAGGACCCACCCCCCTATTCACCCTTAACTAGCCCGGACAGTGGGAGTGCCCCT
ATGATCACCTGCCGAGTCTGCCAATCTCTCATCAACGTGGAAGGCAAGATGCATCAGCAT
GTAGTCAAATGTGGTGTCTGCAATGAAGCCACCCCAATCAAGAATGCACCCCCAGGGAAA
AAATATGTTCGATGCCCCTGTAACTGTCTCCTTATCTGCAAAGTGACATCCCAACGGATT
GCATGCCCTCGGCCCTACTGCAAAAGAATCATCAACCTGGGGCCTGTGCATCCCGGACCT
CTGAGTCCAGAACCCCAACCCATGGGTGTCAGGGTTATCTGTGGACATTGCAAGAATACT
TTTCTGTGGACAGAGTTCACAGACCGCACTTTGGCACGTTGTCCTCACTGCAGGAAAGTG
TCATCTATTGGGCGCAGATACACACGTAAGAGATGTATCTGCTGCTTCTTGCTTGGCTTG
CTTTTGGCAGTCACTGCCACTGGCCTTGCCTTTGGCACATGGAAGCATGCACGGCGATAT
GGAGGCATCTATGCAGCCTGGGCATTTGTCATCCTGTTGGCTGTGCTGTGTTTGGGCCGG
GCTCTTTATTGGGCCTGTATGAAGGTCAGCCACCCTGTCCAGAACTTCTCC

ORF Protein

Cloned ORF protein sequence for pF1KE0207 Download

>KIEE0207  277 aa
MAADGERSPLLSEPIDGGAGGNGLVGPGGSGAGPGGGLTPSAPPYGAAFPPFPEGHPAVL
PGEDPPPYSPLTSPDSGSAPMITCRVCQSLINVEGKMHQHVVKCGVCNEATPIKNAPPGK
KYVRCPCNCLLICKVTSQRIACPRPYCKRIINLGPVHPGPLSPEPQPMGVRVICGHCKNT
FLWTEFTDRTLARCPHCRKVSSIGRRYTRKRCICCFLLGLLLAVTATGLAFGTWKHARRY
GGIYAAWAFVILLAVLCLGRALYWACMKVSHPVQNFS

ORF+Vector

Nucleotide Sequence (with vector) for pF1KE0207 Download

>pF1KE0207  3944 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGGCGGCAGAC
GGAGAGCGTTCCCCGCTGCTGTCTGAGCCCATCGACGGTGGCGCGGGCGGCAACGGTTTA
GTGGGGCCCGGCGGGAGTGGGGCTGGGCCCGGGGGAGGCCTGACCCCCTCCGCACCACCG
TACGGAGCCGCATTTCCCCCGTTTCCCGAGGGGCATCCAGCCGTGTTGCCTGGGGAGGAC
CCACCCCCCTATTCACCCTTAACTAGCCCGGACAGTGGGAGTGCCCCTATGATCACCTGC
CGAGTCTGCCAATCTCTCATCAACGTGGAAGGCAAGATGCATCAGCATGTAGTCAAATGT
GGTGTCTGCAATGAAGCCACCCCAATCAAGAATGCACCCCCAGGGAAAAAATATGTTCGA
TGCCCCTGTAACTGTCTCCTTATCTGCAAAGTGACATCCCAACGGATTGCATGCCCTCGG
CCCTACTGCAAAAGAATCATCAACCTGGGGCCTGTGCATCCCGGACCTCTGAGTCCAGAA
CCCCAACCCATGGGTGTCAGGGTTATCTGTGGACATTGCAAGAATACTTTTCTGTGGACA
GAGTTCACAGACCGCACTTTGGCACGTTGTCCTCACTGCAGGAAAGTGTCATCTATTGGG
CGCAGATACACACGTAAGAGATGTATCTGCTGCTTCTTGCTTGGCTTGCTTTTGGCAGTC
ACTGCCACTGGCCTTGCCTTTGGCACATGGAAGCATGCACGGCGATATGGAGGCATCTAT
GCAGCCTGGGCATTTGTCATCCTGTTGGCTGTGCTGTGTTTGGGCCGGGCTCTTTATTGG
GCCTGTATGAAGGTCAGCCACCCTGTCCAGAACTTCTCCGTTTAAACGAATTCGAGCTCG
GTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAA
AGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCT
TGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGGTTC
GCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGCTAC
CTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCAT
CCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCC
CTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCC
TCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGGATC
TGATGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGGTCGTTTCGCATGCTT
GAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGCTAT
GACTGGGCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAG
GGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAGGAC
GAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTCGAC
GTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGATCTC
CTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCAATGCGGCGG
CTGCATACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCGAAACATCGCATCGAG
CGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAGCAT
CAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGTGAG
GATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATGGTGGAAAATGGCCGC
TTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATAGCG
TTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTCGTG
CTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGACGAG
TTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCAACCGGTATC
AGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAA
CATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTT
TTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTG
GCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCG
CTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAG
CGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTC
CAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAA
CTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGG
TAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCC
TAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTAC
CTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGG
TTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTT
GATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGT
CATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAAC
GCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGA
TTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAAT
TTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCT
GCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCC
ACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTC
CGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGG
TCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCC
GAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGT
AGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTT
TTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATT
TGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCA
GGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTC
TTTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCAT