SNAI3 ORF clone FXC06912

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Flexi ORF Clone FXC06912

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Clone info.

Species

human

Clone Name

pF1KB7601 Sequence (with vector) Restriction Map

Product ID

FXC06912

HaloTag Clone PID

FHC06912

ORF Sequence

DNA sequence (876 bp)
Protein sequence (292 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB464228]

Gene

KIBB7601

Symbol

SNAI3

Alias : SMUC, SNAIL3, ZNF293, Zfp293

Description

snail family zinc finger 3

Original Clone ID

cs00101

Features of the cloned ORF sequence

Description

Length: 876 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 292 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS32505.1 4.8e-79 100.0 SNAI3 CCDS6146.1 1.1e-28 51.4 SNAI2 CCDS13423.1 1.2e-22 45.9 SNAI1 CCDS6421.1 2.8e-18 49.7 SCRT1 CCDS13006.1 3.3e-18 39.4 SCRT2 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR007087 183 205 PF00096 Zinc finger IPR007087 210 231 PF00096 Zinc finger IPR007087 237 259 PF00096 Zinc finger HMMSmart IPR015880 152 174 SM00355 Zinc finger IPR015880 183 205 SM00355 Zinc finger IPR015880 209 231 SM00355 Zinc finger IPR015880 237 259 SM00355 Zinc finger IPR015880 265 285 SM00355 Zinc finger ProfileScan IPR007087 152 174 PS50157 Zinc finger IPR007087 183 206 PS50157 Zinc finger IPR007087 209 236 PS50157 Zinc finger IPR007087 237 264 PS50157 Zinc finger IPR007087 265 292 PS50157 Zinc finger
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_840101 292 612741 100.0 100.0 NP_003059 268 172800,602150,608890 51.4 99.0 NP_005976 264 604238 45.9 99.3 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB7601 Download

>KIBB7601  876 bp
ATGCCGCGCTCCTTCCTGGTGAAAACGCACTCCAGCCACAGGGTCCCCAACTACCGGCGG
CTGGAGACGCAGAGAGAAATCAATGGTGCCTGCTCTGCCTGTGGGGGGCTGGTGGTGCCC
CTCCTCCCCCGAGACAAGGAGGCCCCTTCTGTGCCCGGTGACCTTCCCCAGCCCTGGGAC
CGCTCCTCGGCCGTCGCCTGCATCTCCCTGCCCCTCCTGCCACGGATCGAGGAAGCTCTG
GGGGCCTCTGGGCTGGACGCCTTGGAAGTCAGCGAGGTCGACCCTCGGGCCAGCCGGGCC
GCCATTGTACCCCTCAAAGACAGCCTGAACCACCTCAACCTGCCCCCACTGCTGGTGCTG
CCCACACGGTGGTCCCCGACCTTGGGCCCAGACCGGCACGGGGCTCCGGAAAAACTGCTT
GGGGCTGAGCGGATGCCCCGAGCCCCGGGCGGCTTTGAGTGCTTCCACTGCCACAAACCC
TACCACACGCTGGCCGGGCTGGCCAGGCACCGGCAGCTGCACTGCCACCTGCAGGTGGGG
CGTGTCTTCACCTGCAAGTACTGCGACAAGGAGTACACCAGCCTGGGTGCCCTCAAGATG
CACATCCGCACTCACACGCTGCCCTGCACCTGCAAGATCTGTGGCAAGGCCTTCTCCAGG
CCCTGGTTACTGCAGGGCCATGTCCGCACCCACACAGGGGAGAAGCCCTATGCCTGCTCG
CACTGCAGCAGGGCCTTTGCCGACCGCTCCAACCTTCGGGCCCATCTGCAAACGCACTCA
GACGCCAAGAAGTACCGGTGCCGGCGCTGCACCAAGACCTTCTCCCGCATGTCCCTCCTG
GCGCGGCATGAGGAGTCTGGCTGCTGCCCGGGCCCC

ORF Protein

Cloned ORF protein sequence for pF1KB7601 Download

>KIBB7601  292 aa
MPRSFLVKTHSSHRVPNYRRLETQREINGACSACGGLVVPLLPRDKEAPSVPGDLPQPWD
RSSAVACISLPLLPRIEEALGASGLDALEVSEVDPRASRAAIVPLKDSLNHLNLPPLLVL
PTRWSPTLGPDRHGAPEKLLGAERMPRAPGGFECFHCHKPYHTLAGLARHRQLHCHLQVG
RVFTCKYCDKEYTSLGALKMHIRTHTLPCTCKICGKAFSRPWLLQGHVRTHTGEKPYACS
HCSRAFADRSNLRAHLQTHSDAKKYRCRRCTKTFSRMSLLARHEESGCCPGP

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB7601 Download

>pF1KB7601  3989 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGCCGCGCTCC
TTCCTGGTGAAAACGCACTCCAGCCACAGGGTCCCCAACTACCGGCGGCTGGAGACGCAG
AGAGAAATCAATGGTGCCTGCTCTGCCTGTGGGGGGCTGGTGGTGCCCCTCCTCCCCCGA
GACAAGGAGGCCCCTTCTGTGCCCGGTGACCTTCCCCAGCCCTGGGACCGCTCCTCGGCC
GTCGCCTGCATCTCCCTGCCCCTCCTGCCACGGATCGAGGAAGCTCTGGGGGCCTCTGGG
CTGGACGCCTTGGAAGTCAGCGAGGTCGACCCTCGGGCCAGCCGGGCCGCCATTGTACCC
CTCAAAGACAGCCTGAACCACCTCAACCTGCCCCCACTGCTGGTGCTGCCCACACGGTGG
TCCCCGACCTTGGGCCCAGACCGGCACGGGGCTCCGGAAAAACTGCTTGGGGCTGAGCGG
ATGCCCCGAGCCCCGGGCGGCTTTGAGTGCTTCCACTGCCACAAACCCTACCACACGCTG
GCCGGGCTGGCCAGGCACCGGCAGCTGCACTGCCACCTGCAGGTGGGGCGTGTCTTCACC
TGCAAGTACTGCGACAAGGAGTACACCAGCCTGGGTGCCCTCAAGATGCACATCCGCACT
CACACGCTGCCCTGCACCTGCAAGATCTGTGGCAAGGCCTTCTCCAGGCCCTGGTTACTG
CAGGGCCATGTCCGCACCCACACAGGGGAGAAGCCCTATGCCTGCTCGCACTGCAGCAGG
GCCTTTGCCGACCGCTCCAACCTTCGGGCCCATCTGCAAACGCACTCAGACGCCAAGAAG
TACCGGTGCCGGCGCTGCACCAAGACCTTCTCCCGCATGTCCCTCCTGGCGCGGCATGAG
GAGTCTGGCTGCTGCCCGGGCCCCGTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCT
CTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGC
TGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAAACG
GGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAA
AACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGC
GCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCG
TTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTG
CTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGG
AAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGA
TCAAGATCTGATCAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAACAAGATGGATTG
CACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAACAG
ACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTT
TTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTA
TCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCG
GGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTT
GCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCAATGCGGCGGCTGCATACGCTTGAT
CCGGCTACCTGCCCATTCGACCACCAAGCGAAACATCGCATCGAGCGAGCACGCACTCGG
ATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCA
GCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACT
CATGGCGATGCCTGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATC
GACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTGGCTACCCGTGAT
ATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCC
GCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGA
CTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGC
GGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGG
CCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCG
CCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGG
ACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGAC
CCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCA
TAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGT
GCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTC
CAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAG
AGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACAC
TAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGT
TGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAA
GCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGG
GTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAA
AAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCC
CTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAAT
GTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATT
GCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTG
AACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCC
TCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCG
AGATCTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAA
TTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAA
ACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGC
ATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGT
CGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGC
AACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGC
AGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTTTTC
TAAATACATTCAAATATGTATCCGCTCAT