SLC10A3 ORF clone FXC06840

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Flexi ORF Clone FXC06840

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Clone info.

Species

human

Clone Name

pF1KE0450 Sequence (with vector) Restriction Map

Product ID

FXC06840

HaloTag Clone PID

FHC06840

ORF Sequence

DNA sequence (1344 bp)
Protein sequence (448 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB528232]

Gene

KIEE0450

Symbol

SLC10A3

Alias : DXS253E, P3

Description

solute carrier family 10, member 3, transcript variant 2

Original Clone ID

oc01150

Features of the cloned ORF sequence

Description

Length: 1344 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 448 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS48195.1 4.6e-170 100.0 SLC10A3 CCDS14755.1 1.1e-121 93.9 SLC10A3 CCDS34915.1 1.1e-50 42.7 SLC10A5 CCDS3614.1 1.2e-21 31.7 SLC10A6 CCDS9797.1 8.3e-21 33.1 SLC10A1 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR002657 169 350 PF01758 Bile acid:sodium symporter HMMTigr IPR004710 123 445 TIGR00841 Bile acid transporter
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 21 GGTGPLSMLRAALLLISLPWGAQ 43 SECONDARY 23 2 199 LGLLGQFLVMPLYAFLMAKVFML 221 SECONDARY 23 3 251 DVTLAISMTFLSTVAATGFLPLS 273 SECONDARY 23 4 290 PISKILGTLLFIAIPIAVGVLIK 312 PRIMARY 23 5 323 LQVVKPFSFVLLLGGLFLAYRMG 345 PRIMARY 23 6 358 LVGITVPLVGLLVGYCLATCLKL 380 PRIMARY 23 7 421 FIVALSGTSEMLALVIGHFIYSS 443 SECONDARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_001135863 448 312090 100.0 100.0 XP_006724911 541 312090 100.0 100.0 XP_011529503 477 312090 93.9 100.0 NP_001135864 477 312090 93.9 100.0 NP_062822 477 312090 93.9 100.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KE0450 Download

>KIEE0450  1344 bp
ATGGTGTTAATGCAGGACAAGGGCAGCTCTCAGCAGTGGCCTGGTCTGGGGGGCGAGGGT
GGTGGCACAGGTCCCTTAAGCATGCTCAGAGCTGCCCTGCTGCTCATCAGCCTGCCATGG
GGGGCCCAAGGGACAGCCAGCACCAGCCTCAGCACTGCTGGGGGTCACACCGTGCCACCG
ACTGGGGGCCGCTACTTGAGCATTGGAGATGGCTCTGTGATGGAGTTTGAGTTTCCTGAG
GACAGTGAGGGCATCATCGTGATCTCCAGCCAGTACCCAGGCCAGGCCAACAGGACGGCG
CCTGGCCCCATGCTCAGGGTCACCTCCCTGGACACAGAGGTGCTGACCATCAAGAACCTC
GTGGACGCCCATGAGGCCCCGCCCACACTGATTGAGGAGCGGAGAGACTTCTGCATCAAG
GTCTCACCTGCTGAGGACACGCCTGCCACCCTCAGCGCCGACCTGGCCCACTTCTCGGAA
AACCCAATCCTCTACCTGCTCCTGCCTCTTATCTTTGTCAACAAGTGTTCGTTTGGGTGC
AAAGTGGAACTCGAGGTTCTGAAGGGGCTCATGCAGAGCCCCCAGCCCATGCTGCTGGGC
CTCCTGGGCCAGTTTCTGGTCATGCCCTTGTACGCTTTCCTCATGGCCAAGGTCTTCATG
CTGCCCAAGGCCCTGGCTCTGGGCCTCATCATCACCTGCTCGTCGCCTGGCGGCGGGGGG
AGCTACCTCTTCAGCCTCCTTCTTGGGGGGGACGTCACCCTGGCCATCTCCATGACTTTC
CTCTCTACGGTGGCTGCCACTGGCTTCTTGCCTCTGTCTTCGGCCATCTACAGCCGCCTG
CTCAGCATCCATGAGACGCTCCACGTGCCCATCTCCAAGATCCTGGGGACCCTGCTGTTC
ATTGCCATCCCCATAGCCGTGGGCGTGCTGATCAAGTCCAAGCTCCCCAAGTTCTCCCAG
CTGCTGCTGCAGGTCGTCAAGCCCTTCAGCTTTGTGCTCCTCCTGGGCGGCCTCTTCCTG
GCCTATCGCATGGGGGTCTTCATCCTGGCAGGCATCCGGCTACCCATCGTACTGGTGGGT
ATCACGGTGCCCCTGGTTGGCCTGTTGGTGGGCTACTGCCTAGCCACGTGTCTGAAGCTG
CCAGTGGCCCAGCGGCGGACGGTCAGCATTGAGGTAGGGGTGCAGAACAGCCTGCTGGCC
TTGGCCATGCTGCAGCTATCCCTCCGCCGCCTTCAAGCTGACTATGCCTCCCAGGCCCCC
TTCATTGTGGCGCTGAGCGGCACCTCCGAGATGCTGGCCTTGGTCATTGGCCACTTCATC
TACAGCAGCCTGTTCCCAGTTCCC

ORF Protein

Cloned ORF protein sequence for pF1KE0450 Download

>KIEE0450  448 aa
MVLMQDKGSSQQWPGLGGEGGGTGPLSMLRAALLLISLPWGAQGTASTSLSTAGGHTVPP
TGGRYLSIGDGSVMEFEFPEDSEGIIVISSQYPGQANRTAPGPMLRVTSLDTEVLTIKNL
VDAHEAPPTLIEERRDFCIKVSPAEDTPATLSADLAHFSENPILYLLLPLIFVNKCSFGC
KVELEVLKGLMQSPQPMLLGLLGQFLVMPLYAFLMAKVFMLPKALALGLIITCSSPGGGG
SYLFSLLLGGDVTLAISMTFLSTVAATGFLPLSSAIYSRLLSIHETLHVPISKILGTLLF
IAIPIAVGVLIKSKLPKFSQLLLQVVKPFSFVLLLGGLFLAYRMGVFILAGIRLPIVLVG
ITVPLVGLLVGYCLATCLKLPVAQRRTVSIEVGVQNSLLALAMLQLSLRRLQADYASQAP
FIVALSGTSEMLALVIGHFIYSSLFPVP

ORF+Vector

Nucleotide Sequence (with vector) for pF1KE0450 Download

>pF1KE0450  4457 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGGTGTTAATG
CAGGACAAGGGCAGCTCTCAGCAGTGGCCTGGTCTGGGGGGCGAGGGTGGTGGCACAGGT
CCCTTAAGCATGCTCAGAGCTGCCCTGCTGCTCATCAGCCTGCCATGGGGGGCCCAAGGG
ACAGCCAGCACCAGCCTCAGCACTGCTGGGGGTCACACCGTGCCACCGACTGGGGGCCGC
TACTTGAGCATTGGAGATGGCTCTGTGATGGAGTTTGAGTTTCCTGAGGACAGTGAGGGC
ATCATCGTGATCTCCAGCCAGTACCCAGGCCAGGCCAACAGGACGGCGCCTGGCCCCATG
CTCAGGGTCACCTCCCTGGACACAGAGGTGCTGACCATCAAGAACCTCGTGGACGCCCAT
GAGGCCCCGCCCACACTGATTGAGGAGCGGAGAGACTTCTGCATCAAGGTCTCACCTGCT
GAGGACACGCCTGCCACCCTCAGCGCCGACCTGGCCCACTTCTCGGAAAACCCAATCCTC
TACCTGCTCCTGCCTCTTATCTTTGTCAACAAGTGTTCGTTTGGGTGCAAAGTGGAACTC
GAGGTTCTGAAGGGGCTCATGCAGAGCCCCCAGCCCATGCTGCTGGGCCTCCTGGGCCAG
TTTCTGGTCATGCCCTTGTACGCTTTCCTCATGGCCAAGGTCTTCATGCTGCCCAAGGCC
CTGGCTCTGGGCCTCATCATCACCTGCTCGTCGCCTGGCGGCGGGGGGAGCTACCTCTTC
AGCCTCCTTCTTGGGGGGGACGTCACCCTGGCCATCTCCATGACTTTCCTCTCTACGGTG
GCTGCCACTGGCTTCTTGCCTCTGTCTTCGGCCATCTACAGCCGCCTGCTCAGCATCCAT
GAGACGCTCCACGTGCCCATCTCCAAGATCCTGGGGACCCTGCTGTTCATTGCCATCCCC
ATAGCCGTGGGCGTGCTGATCAAGTCCAAGCTCCCCAAGTTCTCCCAGCTGCTGCTGCAG
GTCGTCAAGCCCTTCAGCTTTGTGCTCCTCCTGGGCGGCCTCTTCCTGGCCTATCGCATG
GGGGTCTTCATCCTGGCAGGCATCCGGCTACCCATCGTACTGGTGGGTATCACGGTGCCC
CTGGTTGGCCTGTTGGTGGGCTACTGCCTAGCCACGTGTCTGAAGCTGCCAGTGGCCCAG
CGGCGGACGGTCAGCATTGAGGTAGGGGTGCAGAACAGCCTGCTGGCCTTGGCCATGCTG
CAGCTATCCCTCCGCCGCCTTCAAGCTGACTATGCCTCCCAGGCCCCCTTCATTGTGGCG
CTGAGCGGCACCTCCGAGATGCTGGCCTTGGTCATTGGCCACTTCATCTACAGCAGCCTG
TTCCCAGTTCCCGTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACC
TGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGC
TGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGG
TTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTC
TAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTC
CCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACT
GGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCG
TGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAA
GTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCTGAT
CAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAACAAGATGGATTGCACGCAGGTTCT
CCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAACAGACAATCGGCTGC
TCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACC
GACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCC
ACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGG
CTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAG
AAAGTATCCATCATGGCTGATGCAATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGC
CCATTCGACCACCAAGCGAAACATCGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGT
CTTGTCGATCAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTC
GCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACTCATGGCGATGCC
TGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGG
CTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTGGCTACCCGTGATATTGCTGAAGAG
CTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCG
CAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCG
AAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTT
ATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGC
CAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGA
GCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATA
CCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTAC
CGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTG
TAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCC
CGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAG
ACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGT
AGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGT
ATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTG
ATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTAC
GCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCA
GTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCAC
CTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGAT
GGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACC
CTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTT
CGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAG
CGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCG
AGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAG
CCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGG
CAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGC
CGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAAC
GAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTC
TCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAG
GGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCC
TGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTTTTCTAAATACATTCA
AATATGTATCCGCTCAT