PJA1 ORF clone FXC06375

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Flexi ORF Clone FXC06375

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Clone info.

Species

human

Clone Name

pF1KB5190 Sequence (with vector) Restriction Map

Product ID

FXC06375

HaloTag Clone PID

FHC06375

Original Clone PID

ORK06375

ORF Sequence

DNA sequence (1764 bp)
Protein sequence (588 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1KOF Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB527200]

Gene

KIBB5190

Symbol

PJA1

Alias : PRAJA1, RNF70

Description

praja ring finger 1, E3 ubiquitin protein ligase, transcript variant 2

Original Clone ID

bm01524

Features of the cloned ORF sequence

Description

Length: 1764 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 588 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS35316.1 4.4e-162 100.0 PJA1 CCDS14393.1 4.7e-162 100.0 PJA1 CCDS14392.1 2.5e-97 98.6 PJA1 CCDS4099.1 1.8e-44 46.9 PJA2 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR018957 540 580 PF00097 Zinc finger HMMSmart IPR001841 540 580 SM00184 Zinc finger ProfileScan IPR001841 540 581 PS50089 Zinc finger
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_001027568 588 300420 100.0 100.0 XP_005262349 588 300420 100.0 100.0 XP_011529313 643 300420 100.0 100.0 NP_660095 643 300420 100.0 100.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB5190 Download

>KIBB5190  1764 bp
ATGCACAGATCAGCCCCCAGTCAAACCACCAAGAGGAGCCGATCGCCATTTTCCACTACT
CGTCGTAGTTGGGACGACAGCGAGAGTTCGGGAACCAACCTGAATATTGATAATGAGGAC
TATTCCAGGTATCCGCCAAGAGAGTACAGAGCTTCGGGTAGCAGAAGAGGAATGGCCTAT
GGACATATTGACTCTTATGGGGCAGATGATAGTGAGGAGGAGGGGGCTGGGCCTGTTGAG
CGACCGCCAGTGAGAGGGAAAACTGGCAAGTTTAAAGATGATAAGCTGTATGACCCAGAG
AAAGGGGCAAGGTCTTTGGCTGGGCCACCTCCACATTTCTCTAGTTTTAGCCGTGATGTG
AGAGAGGAGCGAGACAAGTTAGACCCAGTCCCTGCAGCAAGATGCTCAGCTAGCAGAGCT
GACTTCCTGCCACAAAGTAGTGTGGCCTCACAGTCGTCTTCTGAAGGCAAGCTGGCTACA
AAAGGTGACAGCTCGGAGAGGGAGAGAAGGGAGCAAAATTTACCTGCACGTCCCAGCAGG
GCTCCTGTGAGTATTTGTGGTGGTGGGGAAAACACCTCAAAGAGTGCAGAGGAACCTGTG
GTCAGGCCCAAAATCAGAAACCTGGCAAGTCCAAACTGCGTGAAACCAAAAATTTTTTTT
GATACTGATGATGATGACGATATGCCACACAGTACTTCCAGGTGGAGGGATACCGCCAAT
GACAATGAGGGCCACTCGGATGGCCTGGCAAGAAGAGGGAGAGGCGAGAGTTCAAGTGGC
TATCCCGAGCCAAAGTACCCTGAAGACAAACGGGAAGCGAGGAGTGACCAAGTGAAACCA
GAAAAGGTGCCGAGACGACGACGCACCATGGCCGACCCTGACTTCTGGACGCACAGTGAT
GATTACTACAAATACTGCGACGAAGACTCTGACAGTGACAAAGAGTGGATTGCTGCTCTG
CGTCGGAAATATCGAAGCCGAGAGCAAACCCTGTCCTCCAGTGGCGAAAGCTGGGAGACT
CTGCCGGGGAAAGAAGAGCGGGAACCTCCACAGGCTAAGGTGAGTGCCAGCACTGGCACC
AGCCCTGGCCCCGGTGCTAGTGCCAGTGCCGGGGCTGGCGCCGGGGCCAGTGCTGGCAGC
AATGGCAGCAATTACCTTGAAGAAGTTCGAGAACCATCTCTTCAGGAAGAGCAGGCATCC
CTGGAAGAAGGAGAAATTCCTTGGCTCCAGTACCATGAGAATGACAGTAGCAGTGAGGGG
GATAATGATTCTGGTCACGAGTTGATGCAACCTGGGGTATTCATGCTGGATGGAAACAAC
AACCTTGAAGATGACTCCAGTGTGAGCGAAGACCTAGAAGTGGATTGGAGCCTCTTTGAT
GGATTTGCAGATGGGTTAGGAGTGGCTGAAGCCATTTCCTATGTGGACCCTCAGTTCCTC
ACCTACATGGCACTTGAAGAACGCCTGGCCCAGGCAATGGAAACTGCCCTTGCGCACTTG
GAGTCTCTCGCAGTGGATGTAGAGGTGGCCAATCCACCAGCAAGCAAGGAGAGCATTGAC
GCTCTTCCCGAGATCCTGGTCACTGAAGATCATGGCGCAGTTGGTCAGGAGATGTGCTGC
CCCATCTGCTGTAGCGAATATGTGAAGGGGGAGGTGGCAACTGAGCTGCCGTGCCACCAC
TATTTCCACAAGCCGTGTGTGTCCATCTGGCTTCAGAAGTCAGGCACCTGCCCCGTGTGC
CGCTGCATGTTCCCTCCCCCACTC

ORF Protein

Cloned ORF protein sequence for pF1KB5190 Download

>KIBB5190  588 aa
MHRSAPSQTTKRSRSPFSTTRRSWDDSESSGTNLNIDNEDYSRYPPREYRASGSRRGMAY
GHIDSYGADDSEEEGAGPVERPPVRGKTGKFKDDKLYDPEKGARSLAGPPPHFSSFSRDV
REERDKLDPVPAARCSASRADFLPQSSVASQSSSEGKLATKGDSSERERREQNLPARPSR
APVSICGGGENTSKSAEEPVVRPKIRNLASPNCVKPKIFFDTDDDDDMPHSTSRWRDTAN
DNEGHSDGLARRGRGESSSGYPEPKYPEDKREARSDQVKPEKVPRRRRTMADPDFWTHSD
DYYKYCDEDSDSDKEWIAALRRKYRSREQTLSSSGESWETLPGKEEREPPQAKVSASTGT
SPGPGASASAGAGAGASAGSNGSNYLEEVREPSLQEEQASLEEGEIPWLQYHENDSSSEG
DNDSGHELMQPGVFMLDGNNNLEDDSSVSEDLEVDWSLFDGFADGLGVAEAISYVDPQFL
TYMALEERLAQAMETALAHLESLAVDVEVANPPASKESIDALPEILVTEDHGAVGQEMCC
PICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTCPVCRCMFPPPL

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB5190 Download

>pF1KB5190  4877 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGCACAGATCA
GCCCCCAGTCAAACCACCAAGAGGAGCCGATCGCCATTTTCCACTACTCGTCGTAGTTGG
GACGACAGCGAGAGTTCGGGAACCAACCTGAATATTGATAATGAGGACTATTCCAGGTAT
CCGCCAAGAGAGTACAGAGCTTCGGGTAGCAGAAGAGGAATGGCCTATGGACATATTGAC
TCTTATGGGGCAGATGATAGTGAGGAGGAGGGGGCTGGGCCTGTTGAGCGACCGCCAGTG
AGAGGGAAAACTGGCAAGTTTAAAGATGATAAGCTGTATGACCCAGAGAAAGGGGCAAGG
TCTTTGGCTGGGCCACCTCCACATTTCTCTAGTTTTAGCCGTGATGTGAGAGAGGAGCGA
GACAAGTTAGACCCAGTCCCTGCAGCAAGATGCTCAGCTAGCAGAGCTGACTTCCTGCCA
CAAAGTAGTGTGGCCTCACAGTCGTCTTCTGAAGGCAAGCTGGCTACAAAAGGTGACAGC
TCGGAGAGGGAGAGAAGGGAGCAAAATTTACCTGCACGTCCCAGCAGGGCTCCTGTGAGT
ATTTGTGGTGGTGGGGAAAACACCTCAAAGAGTGCAGAGGAACCTGTGGTCAGGCCCAAA
ATCAGAAACCTGGCAAGTCCAAACTGCGTGAAACCAAAAATTTTTTTTGATACTGATGAT
GATGACGATATGCCACACAGTACTTCCAGGTGGAGGGATACCGCCAATGACAATGAGGGC
CACTCGGATGGCCTGGCAAGAAGAGGGAGAGGCGAGAGTTCAAGTGGCTATCCCGAGCCA
AAGTACCCTGAAGACAAACGGGAAGCGAGGAGTGACCAAGTGAAACCAGAAAAGGTGCCG
AGACGACGACGCACCATGGCCGACCCTGACTTCTGGACGCACAGTGATGATTACTACAAA
TACTGCGACGAAGACTCTGACAGTGACAAAGAGTGGATTGCTGCTCTGCGTCGGAAATAT
CGAAGCCGAGAGCAAACCCTGTCCTCCAGTGGCGAAAGCTGGGAGACTCTGCCGGGGAAA
GAAGAGCGGGAACCTCCACAGGCTAAGGTGAGTGCCAGCACTGGCACCAGCCCTGGCCCC
GGTGCTAGTGCCAGTGCCGGGGCTGGCGCCGGGGCCAGTGCTGGCAGCAATGGCAGCAAT
TACCTTGAAGAAGTTCGAGAACCATCTCTTCAGGAAGAGCAGGCATCCCTGGAAGAAGGA
GAAATTCCTTGGCTCCAGTACCATGAGAATGACAGTAGCAGTGAGGGGGATAATGATTCT
GGTCACGAGTTGATGCAACCTGGGGTATTCATGCTGGATGGAAACAACAACCTTGAAGAT
GACTCCAGTGTGAGCGAAGACCTAGAAGTGGATTGGAGCCTCTTTGATGGATTTGCAGAT
GGGTTAGGAGTGGCTGAAGCCATTTCCTATGTGGACCCTCAGTTCCTCACCTACATGGCA
CTTGAAGAACGCCTGGCCCAGGCAATGGAAACTGCCCTTGCGCACTTGGAGTCTCTCGCA
GTGGATGTAGAGGTGGCCAATCCACCAGCAAGCAAGGAGAGCATTGACGCTCTTCCCGAG
ATCCTGGTCACTGAAGATCATGGCGCAGTTGGTCAGGAGATGTGCTGCCCCATCTGCTGT
AGCGAATATGTGAAGGGGGAGGTGGCAACTGAGCTGCCGTGCCACCACTATTTCCACAAG
CCGTGTGTGTCCATCTGGCTTCAGAAGTCAGGCACCTGCCCCGTGTGCCGCTGCATGTTC
CCTCCCCCACTCGTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACC
TGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGC
TGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGG
TTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTC
TAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTC
CCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACT
GGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCG
TGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAA
GTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCTGAT
CAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAACAAGATGGATTGCACGCAGGTTCT
CCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAACAGACAATCGGCTGC
TCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACC
GACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCC
ACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGG
CTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAG
AAAGTATCCATCATGGCTGATGCAATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGC
CCATTCGACCACCAAGCGAAACATCGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGT
CTTGTCGATCAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTC
GCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACTCATGGCGATGCC
TGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGG
CTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTGGCTACCCGTGATATTGCTGAAGAG
CTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCG
CAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCG
AAATGACCGACCAAGCGACGCCCAACCGGACTATAAAAGGATCTAGGTGAAGATCCTTTT
TGATAATCTCATGACCAAAATCCCTTAACGTGAGTTTTCGTTCCACTGAGCGTCAGACCC
CGTAGAAAAGATCAAAGGATCTTCTTGAAATCCTTTTTTTCTGCGCGTAATCTGCTGCTT
GCAAACAAAAAAACCACCGCTACCAGCGGTGGTTTGTTTGCCGGATCAAGAGCTACCAAC
TCTTTTTCCGAAGGTAACTGGCTTCAGCAGAGCGCAGATACCAAATACTGTCCTTCTAGT
GTAGCCGTAGTTAGGCCACCACTTCAAGAACTCTGTAGCACCGCCTACATACCTCGCTCT
GCTAATCCTGTTACCAGTGGCTGCTGCCAGTGGCGATAAGTCGTGTCTTACCGGGTTGGA
CTCAAGACGATAGTTACCGGATAAGGCGCAGCGGTCGGGCTGAACGGGGGGTTCGTGCAC
ACAGCCCAGCTTGGAGCGAACGACCTACACCGAACTGAGATACCTACAGCGTGAGCTATG
AGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGT
CGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCTGGTATCTTTATAGTCC
TGTCGGGTTTCGCCACCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCG
GAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCC
TTTTGCTCACATGTTCTTTCCTGCGTTATCCCCTGATTCTGTGGATAACCGTATTACCGC
CTTTGAGTGAGCTGATACCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGAT
GGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACC
CTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTT
CGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAG
CGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCG
AGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAG
CCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGG
CAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGC
CGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAAC
GAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTC
TCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAG
GGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCC
TGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTTTTCTAAATACATTCA
AATATGTATCCGCTCAT