NPAS3 ORF clone FXC06177

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Flexi ORF Clone FXC06177

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Clone info.

Species

human

Clone Name

pF1KB9765 Sequence (with vector) Restriction Map

Product ID

FXC06177

HaloTag Clone PID

FHC06177

ORF Sequence

DNA sequence (2709 bp)
Protein sequence (903 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB463928]

Gene

KIBB9765

Symbol

NPAS3

Alias : MOP6, PASD6, bHLHe12

Description

neuronal PAS domain protein 3, transcript variant 4

Original Clone ID

cp00348

Features of the cloned ORF sequence

Description

Length: 2709 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 903 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS55912.1 2.8e-194 100.0 NPAS3 CCDS9645.1 1.8e-193 99.8 NPAS3 CCDS53891.1 2.1e-190 96.8 NPAS3 CCDS53892.1 1.2e-172 98.2 NPAS3 CCDS12694.1 5.1e-14 52.7 NPAS1 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR013767 122 182 PF00989 PAS fold IPR013655 313 399 PF08447 PAS fold-3 HMMSmart IPR001092 27 82 SM00353 Helix-loop-helix DNA-binding domain IPR000014 119 185 SM00091 PAS IPR000014 291 357 SM00091 PAS ProfileScan IPR001092 14 75 PS50888 Helix-loop-helix DNA-binding domain IPR000014 123 187 PS50112 PAS IPR000014 304 359 PS50112 PAS
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_001159365 903 609430 100.0 100.0 NP_071406 901 609430 99.8 100.0 XP_011535374 900 609430 99.7 100.0 XP_016877074 939 609430 98.9 99.7 NP_001158221 933 609430 96.8 100.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB9765 Download

>KIBB9765  2709 bp
ATGGCGCCCACCAAGCCCAGCTTTCAGCAGGATCCTTCCAGGCGAGAACGTTTACAAGCA
TTGAGAAAGGAGAAATCCCGAGATGCTGCTCGCTCCCGCCGGGGAAAAGAAAACTTTGAG
TTCTATGAATTGGCCAAGTTGTTGCCTCTTCCTGCAGCCATTACCAGCCAGCTCGACAAG
GCATCCATCATTCGACTTACAATTAGCTATCTGAAAATGAGGGACTTTGCTAACCAGGGG
GACCCTCCGTGGAACTTGCGAATGGAAGGCCCTCCACCTAACACATCAGTAAAAGTTATA
GGTGCACAGCGAAGGAGAAGCCCCAGTGCACTAGCCATTGAAGTATTTGAAGCACATTTG
GGAAGCCACATTTTGCAGTCCCTGGATGGCTTTGTATTTGCACTAAATCAGGAAGGAAAA
TTTTTGTACATTTCCGAAACAGTCTCCATCTACCTAGGCCTCTCACAAGTGGAGCTGACA
GGCAGCAGTGTCTTTGACTATGTCCACCCCGGAGATCACGTGGAGATGGCTGAGCAGCTG
GGCATGAAGCTCCCCCCTGGGCGGGGTCTCCTGTCACAGGGCACTGCTGAGGACGGAGCC
AGCTCAGCATCTTCCTCCTCTCAGTCGGAGACCCCCGAGCCAGTGGAGTCAACCAGCCCC
AGTCTGCTAACCACTGACAACACTCTTGAGCGTTCCTTTTTCATCCGAATGAAATCTACT
CTGACCAAACGCGGTGTGCACATCAAATCATCAGGATATAAGGTGATTCACATAACAGGC
CGGCTACGCCTGAGAGTGTCGCTGTCCCACGGGAGGACCGTCCCCAGCCAAATCATGGGT
CTCGTGGTTGTTGCGCATGCCTTGCCTCCCCCTACGATCAATGAAGTCAGAATTGACTGC
CATATGTTCGTCACTCGAGTAAATATGGACCTCAATATCATTTACTGTGAAAATAGGATT
AGTGATTATATGGATCTGACCCCTGTAGATATCGTAGGGAAGAGATGCTACCACTTCATC
CATGCTGAAGACGTGGAGGGCATCAGGCACAGTCACTTGGACTTGCTGAATAAGGGTCAG
TGTGTGACAAAGTACTATCGCTGGATGCAGAAGAACGGAGGATATATTTGGATACAGTCC
AGTGCCACCATAGCTATTAATGCCAAGAATGCAAATGAAAAGAATATCATCTGGGTGAAT
TACCTTCTTAGCAATCCTGAGTACAAGGACACACCCATGGACATCGCACAGCTCCCCCAT
CTGCCGGAGAAAACTTCCGAATCCTCGGAGACATCCGACTCTGAGTCAGACTCTAAAGAC
ACCTCAGGTATTACAGAGGACAACGAGAACTCCAAGTCCGACGAGAAGGGGAACCAGTCC
GAGAACAGCGAAGACCCGGAGCCCGACCGGAAGAAGTCGGGCAACGCGTGTGACAACGAC
ATGAACTGCAACGACGACGGCCACAGCTCCAGTAACCCGGACAGCCGCGACAGCGACGAC
AGCTTCGAGCACTCGGACTTTGAGAACCCCAAGGCGGGCGAGGACGGCTTCGGTGCTCTG
GGCGCGATGCAGATCAAGGTGGAGCGCTACGTGGAGAGCGAGTCGGACCTGCGGCTGCAG
AACTGCGAGTCACTCACGTCCGACAGCGCCAAGGACTCGGACAGCGCAGGCGAGGCGGGC
GCGCAGGCCTCCAGCAAGCACCAGAAGCGCAAGAAAAGGCGGAAACGGCAAAAGGGCGGC
AGCGCCAGCCGCCGGCGCCTGTCCAGCGCGTCGAGCCCAGGCGGCCTGGACGCGGGCCTG
GTGGAGCCCCCGCGGCTGCTGTCCTCCCCCAACAGTGCCTCGGTGCTCAAGATCAAGACG
GAGATCTCAGAACCCATCAATTTCGACAATGACAGCAGCATCTGGAACTACCCGCCCAAC
CGGGAGATCTCCAGGAACGAGTCCCCCTACAGCATGACCAAGCCCCCCAGCTCTGAGCAC
TTCCCGTCCCCGCAGGGCGGCGGCGGTGGGGGTGGCGGTGGCGGGGGGCTGCACGTGGCC
ATTCCCGACTCGGTCCTCACCCCGCCCGGCGCCGACGGCGCGGCCGCCCGCAAGACTCAG
TTCGGCGCCTCGGCCACCGCGGCCCTGGCCCCCGTCGCCTCCGACCCGCTGTCACCCCCG
CTCTCGGCGTCCCCGCGGGACAAGCACCCCGGGAACGGCGGCGGGGGCGGGGGCGGGGGC
GGCGGCGCGGGGGGCGGCGGCCCCAGCGCGTCCAACTCCTTGCTGTACACTGGGGACCTG
GAGGCGCTGCAGAGGTTGCAGGCGGGCAACGTCGTGCTCCCGCTGGTGCACAGGGTGACC
GGGACCCTGGCCGCCACCAGCACGGCCGCGCAGAGGGTCTACACCACGGGCACCATCCGC
TACGCGCCCGCCGAGGTGACCCTGGCCATGCAGAGCAACCTGCTGCCCAACGCGCACGCT
GTTAACTTCGTGGACGTTAACAGCCCCGGCTTTGGCCTCGACCCCAAGACGCCCATGGAG
ATGCTCTACCACCACGTGCACCGGCTCAACATGTCAGGACCGTTCGGCGGCGCAGTGAGC
GCAGCTAGCCTGACGCAGATGCCCGCCGGCAACGTGTTCACCACGGCCGAGGGACTCTTC
TCCACGCTGCCCTTCCCCGTCTACAGCAACGGCATCCACGCGGCACAGACTCTGGAGCGC
AAGGAGGAC

ORF Protein

Cloned ORF protein sequence for pF1KB9765 Download

>KIBB9765  903 aa
MAPTKPSFQQDPSRRERLQALRKEKSRDAARSRRGKENFEFYELAKLLPLPAAITSQLDK
ASIIRLTISYLKMRDFANQGDPPWNLRMEGPPPNTSVKVIGAQRRRSPSALAIEVFEAHL
GSHILQSLDGFVFALNQEGKFLYISETVSIYLGLSQVELTGSSVFDYVHPGDHVEMAEQL
GMKLPPGRGLLSQGTAEDGASSASSSSQSETPEPVESTSPSLLTTDNTLERSFFIRMKST
LTKRGVHIKSSGYKVIHITGRLRLRVSLSHGRTVPSQIMGLVVVAHALPPPTINEVRIDC
HMFVTRVNMDLNIIYCENRISDYMDLTPVDIVGKRCYHFIHAEDVEGIRHSHLDLLNKGQ
CVTKYYRWMQKNGGYIWIQSSATIAINAKNANEKNIIWVNYLLSNPEYKDTPMDIAQLPH
LPEKTSESSETSDSESDSKDTSGITEDNENSKSDEKGNQSENSEDPEPDRKKSGNACDND
MNCNDDGHSSSNPDSRDSDDSFEHSDFENPKAGEDGFGALGAMQIKVERYVESESDLRLQ
NCESLTSDSAKDSDSAGEAGAQASSKHQKRKKRRKRQKGGSASRRRLSSASSPGGLDAGL
VEPPRLLSSPNSASVLKIKTEISEPINFDNDSSIWNYPPNREISRNESPYSMTKPPSSEH
FPSPQGGGGGGGGGGGLHVAIPDSVLTPPGADGAAARKTQFGASATAALAPVASDPLSPP
LSASPRDKHPGNGGGGGGGGGGAGGGGPSASNSLLYTGDLEALQRLQAGNVVLPLVHRVT
GTLAATSTAAQRVYTTGTIRYAPAEVTLAMQSNLLPNAHAVNFVDVNSPGFGLDPKTPME
MLYHHVHRLNMSGPFGGAVSAASLTQMPAGNVFTTAEGLFSTLPFPVYSNGIHAAQTLER
KED

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB9765 Download

>pF1KB9765  5822 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGGCGCCCACC
AAGCCCAGCTTTCAGCAGGATCCTTCCAGGCGAGAACGTTTACAAGCATTGAGAAAGGAG
AAATCCCGAGATGCTGCTCGCTCCCGCCGGGGAAAAGAAAACTTTGAGTTCTATGAATTG
GCCAAGTTGTTGCCTCTTCCTGCAGCCATTACCAGCCAGCTCGACAAGGCATCCATCATT
CGACTTACAATTAGCTATCTGAAAATGAGGGACTTTGCTAACCAGGGGGACCCTCCGTGG
AACTTGCGAATGGAAGGCCCTCCACCTAACACATCAGTAAAAGTTATAGGTGCACAGCGA
AGGAGAAGCCCCAGTGCACTAGCCATTGAAGTATTTGAAGCACATTTGGGAAGCCACATT
TTGCAGTCCCTGGATGGCTTTGTATTTGCACTAAATCAGGAAGGAAAATTTTTGTACATT
TCCGAAACAGTCTCCATCTACCTAGGCCTCTCACAAGTGGAGCTGACAGGCAGCAGTGTC
TTTGACTATGTCCACCCCGGAGATCACGTGGAGATGGCTGAGCAGCTGGGCATGAAGCTC
CCCCCTGGGCGGGGTCTCCTGTCACAGGGCACTGCTGAGGACGGAGCCAGCTCAGCATCT
TCCTCCTCTCAGTCGGAGACCCCCGAGCCAGTGGAGTCAACCAGCCCCAGTCTGCTAACC
ACTGACAACACTCTTGAGCGTTCCTTTTTCATCCGAATGAAATCTACTCTGACCAAACGC
GGTGTGCACATCAAATCATCAGGATATAAGGTGATTCACATAACAGGCCGGCTACGCCTG
AGAGTGTCGCTGTCCCACGGGAGGACCGTCCCCAGCCAAATCATGGGTCTCGTGGTTGTT
GCGCATGCCTTGCCTCCCCCTACGATCAATGAAGTCAGAATTGACTGCCATATGTTCGTC
ACTCGAGTAAATATGGACCTCAATATCATTTACTGTGAAAATAGGATTAGTGATTATATG
GATCTGACCCCTGTAGATATCGTAGGGAAGAGATGCTACCACTTCATCCATGCTGAAGAC
GTGGAGGGCATCAGGCACAGTCACTTGGACTTGCTGAATAAGGGTCAGTGTGTGACAAAG
TACTATCGCTGGATGCAGAAGAACGGAGGATATATTTGGATACAGTCCAGTGCCACCATA
GCTATTAATGCCAAGAATGCAAATGAAAAGAATATCATCTGGGTGAATTACCTTCTTAGC
AATCCTGAGTACAAGGACACACCCATGGACATCGCACAGCTCCCCCATCTGCCGGAGAAA
ACTTCCGAATCCTCGGAGACATCCGACTCTGAGTCAGACTCTAAAGACACCTCAGGTATT
ACAGAGGACAACGAGAACTCCAAGTCCGACGAGAAGGGGAACCAGTCCGAGAACAGCGAA
GACCCGGAGCCCGACCGGAAGAAGTCGGGCAACGCGTGTGACAACGACATGAACTGCAAC
GACGACGGCCACAGCTCCAGTAACCCGGACAGCCGCGACAGCGACGACAGCTTCGAGCAC
TCGGACTTTGAGAACCCCAAGGCGGGCGAGGACGGCTTCGGTGCTCTGGGCGCGATGCAG
ATCAAGGTGGAGCGCTACGTGGAGAGCGAGTCGGACCTGCGGCTGCAGAACTGCGAGTCA
CTCACGTCCGACAGCGCCAAGGACTCGGACAGCGCAGGCGAGGCGGGCGCGCAGGCCTCC
AGCAAGCACCAGAAGCGCAAGAAAAGGCGGAAACGGCAAAAGGGCGGCAGCGCCAGCCGC
CGGCGCCTGTCCAGCGCGTCGAGCCCAGGCGGCCTGGACGCGGGCCTGGTGGAGCCCCCG
CGGCTGCTGTCCTCCCCCAACAGTGCCTCGGTGCTCAAGATCAAGACGGAGATCTCAGAA
CCCATCAATTTCGACAATGACAGCAGCATCTGGAACTACCCGCCCAACCGGGAGATCTCC
AGGAACGAGTCCCCCTACAGCATGACCAAGCCCCCCAGCTCTGAGCACTTCCCGTCCCCG
CAGGGCGGCGGCGGTGGGGGTGGCGGTGGCGGGGGGCTGCACGTGGCCATTCCCGACTCG
GTCCTCACCCCGCCCGGCGCCGACGGCGCGGCCGCCCGCAAGACTCAGTTCGGCGCCTCG
GCCACCGCGGCCCTGGCCCCCGTCGCCTCCGACCCGCTGTCACCCCCGCTCTCGGCGTCC
CCGCGGGACAAGCACCCCGGGAACGGCGGCGGGGGCGGGGGCGGGGGCGGCGGCGCGGGG
GGCGGCGGCCCCAGCGCGTCCAACTCCTTGCTGTACACTGGGGACCTGGAGGCGCTGCAG
AGGTTGCAGGCGGGCAACGTCGTGCTCCCGCTGGTGCACAGGGTGACCGGGACCCTGGCC
GCCACCAGCACGGCCGCGCAGAGGGTCTACACCACGGGCACCATCCGCTACGCGCCCGCC
GAGGTGACCCTGGCCATGCAGAGCAACCTGCTGCCCAACGCGCACGCTGTTAACTTCGTG
GACGTTAACAGCCCCGGCTTTGGCCTCGACCCCAAGACGCCCATGGAGATGCTCTACCAC
CACGTGCACCGGCTCAACATGTCAGGACCGTTCGGCGGCGCAGTGAGCGCAGCTAGCCTG
ACGCAGATGCCCGCCGGCAACGTGTTCACCACGGCCGAGGGACTCTTCTCCACGCTGCCC
TTCCCCGTCTACAGCAACGGCATCCACGCGGCACAGACTCTGGAGCGCAAGGAGGACGTT
TAAACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGC
TGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCA
ATAACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGG
AGGAACTATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGT
AAGCCCACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGC
CCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTT
CCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAA
TTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCT
TTCTTGCCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGATGA
CGGTCGTTTCGCATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTG
GAGAGGCTATTCGGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCCGCCGTG
TTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCC
CTGAATGAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCT
TGCGCAGCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAA
GTGCCGGGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATG
GCTGATGCAATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGACCACCAA
GCGAAACATCGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGAT
GATCTGGACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCG
CGTATGCCGGATGGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAATATC
ATGGTGGAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGAC
CGCTATCAGGACATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGG
GCTGACCGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTC
TATCGCCTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAG
CGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGG
GGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAA
GGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCG
ACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCC
TGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGC
CTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTC
GGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCG
CTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCC
ACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGA
GTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGC
TCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAAC
CACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGG
ATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTC
ACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATA
GTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAA
AATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGG
TATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGC
CATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTA
AGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTA
CTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACAGATTAA
ATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGT
CCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGG
GTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGA
AAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAA
ATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGAC
GCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTT
TTGCGTTTCTACAAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTC
AT