LRRC58 ORF clone FXC05880

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Flexi ORF Clone FXC05880

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Clone info.

Species

human

Clone Name

pF1KE0208 Sequence (with vector) Restriction Map

Product ID

FXC05880

HaloTag Clone PID

FHC05880

ORF Sequence

DNA sequence (1113 bp)
Protein sequence (371 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB528173]

Gene

KIEE0208

Symbol

LRRC58

Description

leucine rich repeat containing 58

Original Clone ID

oc00908

Features of the cloned ORF sequence

Description

Length: 1113 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 371 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS46892.1 2.3e-123 100.0 LRRC58 CCDS34844.1 7.6e-15 40.0 MFHAS1 CCDS61325.1 2.5e-12 27.8 LRRC63 CCDS44508.1 2.7e-11 37.8 PIDD1 CCDS7716.1 2.7e-11 37.8 PIDD1 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR001611 121 140 PF00560 Leucine-rich repeat IPR001611 145 165 PF00560 Leucine-rich repeat IPR001611 167 188 PF00560 Leucine-rich repeat IPR001611 190 211 PF00560 Leucine-rich repeat HMMSmart IPR003591 44 66 SM00369 Leucine-rich repeat IPR003591 67 90 SM00369 Leucine-rich repeat IPR003591 119 141 SM00369 Leucine-rich repeat IPR003591 142 164 SM00369 Leucine-rich repeat IPR003591 165 187 SM00369 Leucine-rich repeat IPR003591 188 210 SM00369 Leucine-rich repeat IPR003591 211 234 SM00369 Leucine-rich repeat ProfileScan IPR001611 45 66 PS51450 Leucine-rich repeat IPR001611 69 91 PS51450 Leucine-rich repeat IPR001611 121 143 PS51450 Leucine-rich repeat IPR001611 144 166 PS51450 Leucine-rich repeat IPR001611 167 189 PS51450 Leucine-rich repeat IPR001611 190 211 PS51450 Leucine-rich repeat IPR001611 213 234 PS51450 Leucine-rich repeat IPR001611 236 256 PS51450 Leucine-rich repeat Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KE0208 Download

>KIEE0208  1113 bp
ATGGAGGAGGCCGGAGCAGCGGTGGTCACGGCCGGGGAGGCCGAACTGAACTGGTCCCGC
CTCAGCGTGTCCACCGAGACGCTGGAGTCTGAGCTGGAGGCGCGGGGGGAGGAGCGGCGC
GGGGCGCGGGAGGCGCTGCTGCGGCTGCTGCTGCCTCACAACCGTCTGGTGTCGCTGCCA
CGGGCGCTGGGCAGCGGCTTCCCGCACCTCCAGCTGCTGGACGTGAGCGGCAACGCGTTG
ACCGCGCTCGGGCCGGAGCTGCTCGCTCTGCGCGGCCTGCGCACGCTGCTGGCCAAGAAC
AACCGGCTCGGCGGGCCCAGTGCGCTGCCCAAGGGCCTGGCCCAGTCGCCGCTCTGCCGC
AGCCTCCAGGTGCTCAACCTCAGCGGCAACTGTTTCCAGGAGGTGCCTGCCTCGCTCTTA
GAGCTGCGCGCGCTGCAGACCCTGAGCCTGGGCGGCAACCAACTGCAGAGCATCCCGGCT
GAGATCGAGAACTTGCAGAGTTTAGAGTGTTTATATCTTGGAGGAAATTTCATTAAAGAA
ATCCCACCAGAATTAGGAAATCTGCCTTCTCTGAATTATTTGGTATTATGTGACAACAAA
ATCCAAAGCATACCTCCTCAACTTTCACAGTTACATTCACTTCGTTCCCTAAGTCTTCAC
AATAACTTGCTGACATATCTGCCTCGAGAGATCCTCAACCTTATTCATTTGGAAGAGTTG
AGTTTACGAGGAAATCCATTGGTTGTTCGTTTTGTTAGAGATTTAACCTATGATCCTCCA
ACTCTCCTGGAATTAGCTGCACGGACCATTAAGATTCGAAATATTTCCTACACTCCCTAT
GATCTTCCTGGAAATCTTCTTAGATACTTGGGTTCAGCCAGCAATTGCCCAAACCCAAAG
TGTGGAGGAGTCTACTTTGACTGCTGTGTCAGACAAATTAAATTTGTGGACTTCTGTGGG
AAGTATCGCCTCCCACTGATGCACTACTTGTGTTCACCAGAATGTTCTTCCCCTTGCAGT
TCTGCCTCTCACAGCTCCACTTCCCAGAGTGAATCTGACTCAGAAGATGAAGCTAGTGTT
GCTGCACGCAGAATGCAGAAAGTTCTTCTTGGT

ORF Protein

Cloned ORF protein sequence for pF1KE0208 Download

>KIEE0208  371 aa
MEEAGAAVVTAGEAELNWSRLSVSTETLESELEARGEERRGAREALLRLLLPHNRLVSLP
RALGSGFPHLQLLDVSGNALTALGPELLALRGLRTLLAKNNRLGGPSALPKGLAQSPLCR
SLQVLNLSGNCFQEVPASLLELRALQTLSLGGNQLQSIPAEIENLQSLECLYLGGNFIKE
IPPELGNLPSLNYLVLCDNKIQSIPPQLSQLHSLRSLSLHNNLLTYLPREILNLIHLEEL
SLRGNPLVVRFVRDLTYDPPTLLELAARTIKIRNISYTPYDLPGNLLRYLGSASNCPNPK
CGGVYFDCCVRQIKFVDFCGKYRLPLMHYLCSPECSSPCSSASHSSTSQSESDSEDEASV
AARRMQKVLLG

ORF+Vector

Nucleotide Sequence (with vector) for pF1KE0208 Download

>pF1KE0208  4226 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGGAGGAGGCC
GGAGCAGCGGTGGTCACGGCCGGGGAGGCCGAACTGAACTGGTCCCGCCTCAGCGTGTCC
ACCGAGACGCTGGAGTCTGAGCTGGAGGCGCGGGGGGAGGAGCGGCGCGGGGCGCGGGAG
GCGCTGCTGCGGCTGCTGCTGCCTCACAACCGTCTGGTGTCGCTGCCACGGGCGCTGGGC
AGCGGCTTCCCGCACCTCCAGCTGCTGGACGTGAGCGGCAACGCGTTGACCGCGCTCGGG
CCGGAGCTGCTCGCTCTGCGCGGCCTGCGCACGCTGCTGGCCAAGAACAACCGGCTCGGC
GGGCCCAGTGCGCTGCCCAAGGGCCTGGCCCAGTCGCCGCTCTGCCGCAGCCTCCAGGTG
CTCAACCTCAGCGGCAACTGTTTCCAGGAGGTGCCTGCCTCGCTCTTAGAGCTGCGCGCG
CTGCAGACCCTGAGCCTGGGCGGCAACCAACTGCAGAGCATCCCGGCTGAGATCGAGAAC
TTGCAGAGTTTAGAGTGTTTATATCTTGGAGGAAATTTCATTAAAGAAATCCCACCAGAA
TTAGGAAATCTGCCTTCTCTGAATTATTTGGTATTATGTGACAACAAAATCCAAAGCATA
CCTCCTCAACTTTCACAGTTACATTCACTTCGTTCCCTAAGTCTTCACAATAACTTGCTG
ACATATCTGCCTCGAGAGATCCTCAACCTTATTCATTTGGAAGAGTTGAGTTTACGAGGA
AATCCATTGGTTGTTCGTTTTGTTAGAGATTTAACCTATGATCCTCCAACTCTCCTGGAA
TTAGCTGCACGGACCATTAAGATTCGAAATATTTCCTACACTCCCTATGATCTTCCTGGA
AATCTTCTTAGATACTTGGGTTCAGCCAGCAATTGCCCAAACCCAAAGTGTGGAGGAGTC
TACTTTGACTGCTGTGTCAGACAAATTAAATTTGTGGACTTCTGTGGGAAGTATCGCCTC
CCACTGATGCACTACTTGTGTTCACCAGAATGTTCTTCCCCTTGCAGTTCTGCCTCTCAC
AGCTCCACTTCCCAGAGTGAATCTGACTCAGAAGATGAAGCTAGTGTTGCTGCACGCAGA
ATGCAGAAAGTTCTTCTTGGTGTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCTCTA
GAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGA
GTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAAACGGGT
CTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAAAAC
CGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGCGCT
TGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTT
CTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTT
GCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAG
CCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGATCA
AGATCTGATCAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAACAAGATGGATTGCAC
GCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAACAGACA
ATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTT
GTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTATCG
TGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCGGGA
AGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTTGCT
CCTGCCGAGAAAGTATCCATCATGGCTGATGCAATGCGGCGGCTGCATACGCTTGATCCG
GCTACCTGCCCATTCGACCACCAAGCGAAACATCGCATCGAGCGAGCACGCACTCGGATG
GAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCAGCC
GAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACTCAT
GGCGATGCCTGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATCGAC
TGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTGGCTACCCGTGATATT
GCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCCGCT
CCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGACTC
TGGGGTTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGT
AATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCA
GCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCC
CCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACT
ATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCT
GCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAG
CTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCA
CGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAA
CCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGC
GAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAG
AAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGG
TAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCA
GCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTC
TGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAG
GATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTT
CGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTG
GCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCG
GCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAAC
GCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCG
TAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGA
TCTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTT
GCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACG
CCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATC
AAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGG
TGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAAC
GGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGA
AGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTTTTCTAA
ATACATTCAAATATGTATCCGCTCAT