Gene/Protein Characteristic Table for FXC05536

Species
human

Product ID
FXC05536

Corresponding
HaloTag Clone PID

ORF Sequence
DNA sequence (1047 bp)
Protein sequence (349 aa)

Linker Type
Flexi type
The extra Val codon is attached to the 3'-end of the ORF, because a Pme I site ...

Cloning Site
SgfI-PmeI

GenBank Accession
ORF sequence is derived from [AB463789]

Gene
KIBB7689

Symbol
IRF2
Alias : IRF-2

Description
interferon regulatory factor 2

Original Clone ID
cs00189

Features of the cloned ORF sequence

Length: 1047 bp
Restriction map A Restriction map B
Genomic Structure
Features of the protein sequence

Length: 349 aa
Result of homology search against nr database ( FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
NP_002190 5.5e-141 100.0 interferon regu...
Homo sapiens
XP_003823507 6.3e-141 99.7 interferon regu...
Pan paniscus
XP_517553 1.1e-140 99.4 interferon regu...
Pan troglodytes
NP_001129265 1.1e-140 99.7 interferon regu...
Macaca mulatta
XP_003271519 2.8e-140 99.4 interferon regu...
Nomascus leucogenys

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)
[ zoom out (x2) ] PD002355 PR00267 PR00267 PR00267 PR00267 PF00605 SM00348 PS00601

Result of InterProScan

Search method interpro_ID From To Entry Definition
BlastProDom IPR001346 10 101 PD002355 Interferon regulatory factor
FPrintScan IPR001346 7 26 PR00267 Interferon regulatory factor
IPR001346 33 46 PR00267 Interferon regulatory factor
IPR001346 51 68 PR00267 Interferon regulatory factor
IPR001346 74 96 PR00267 Interferon regulatory factor
HMMPfam IPR001346 5 114 PF00605 Interferon regulatory factor
HMMSmart IPR001346 1 114 SM00348 Interferon regulatory factor
ScanRegExp IPR001346 26 59 PS00601 Interferon regulatory factor

Result of homology search against disease genes in OMIM database
(FASTA output, Multiple alignment)
H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%)
NP_002190 349 147576 100.0 100.0
Inquiries or Suggestions ?
Send a message to office AT kazusa.or.jp