GBAS ORF clone FXC05279

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Flexi ORF Clone FXC05279

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Clone info.

Species

human

Clone Name

pF1KE0184 Sequence (with vector) Restriction Map

Product ID

FXC05279

HaloTag Clone PID

FHC05279

ORF Sequence

DNA sequence (858 bp)
Protein sequence (286 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB528140]

Gene

KIEE0184

Symbol

GBAS

Description

glioblastoma amplified sequence, transcript variant 1

Original Clone ID

oc00884

Features of the cloned ORF sequence

Description

Length: 858 bp
Restriction map A Restriction map B

Features of the protein sequence

Description

Length: 286 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS5521.1 1.5e-134 100.0 GBAS CCDS13860.1 1.4e-91 75.5 NIPSNAP1 CCDS56488.1 3.7e-62 79.7 GBAS CCDS6761.1 9.3e-12 26.1 NIPSNAP3B CCDS6760.1 4e-11 24.5 NIPSNAP3A The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR012577 187 284 PF07978 NIPSNAP
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_001474 286 603004 100.0 100.0 NP_001189431 264 603249 72.3 91.3 NP_003625 284 603249 75.5 87.1 NP_001189398 247 603004 79.7 100.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KE0184 Download

>KIEE0184  858 bp
ATGGCGGCGCGAGTGCTGCGCGCCCGCGGAGCGGCCTGGGCCGGCGGCCTCCTGCAGCGG
GCGGCCCCCTGCAGCCTCCTGCCCAGGCTCCGGACATGGACATCTTCCAGCAACAGATCT
CGAGAAGACAGCTGGCTAAAATCCTTATTTGTCCGGAAAGTTGATCCAAGAAAAGATGCC
CACTCCAATCTCCTAGCCAAAAAGGAAACAAGCAATCTATACAAATTACAGTTTCACAAT
GTTAAACCGGAATGCCTAGAAGCATACAACAAAATTTGTCAAGAGGTGTTGCCAAAGATT
CACGAAGATAAACACTACCCTTGTACTTTGGTGGGGACTTGGAACACGTGGTATGGCGAG
CAGGACCAAGCTGTCCACCTCTGGAGGTATGAAGGAGGCTATCCAGCCCTCACAGAAGTC
ATGAATAAACTCAGAGAAAATAAGGAATTTTTGGAATTTCGTAAGGCAAGAAGTGACATG
CTTCTCTCCAGGAAGAATCAGCTCCTGTTGGAGTTCAGTTTCTGGAATGAGCCTGTGCCA
AGATCCGGACCTAATATATATGAACTCAGGTCTTACCAACTCCGACCAGGAACCATGATT
GAATGGGGCAATTACTGGGCTCGTGCAATCCGCTTCAGACAGGATGGTAACGAAGCCGTC
GGAGGATTCTTCTCTCAGATTGGGCAGCTGTACATGGTGCACCATCTTTGGGCTTACAGG
GATCTTCAGACCAGGGAAGACATACGGAATGCAGCATGGCACAAACATGGCTGGGAGGAA
TTGGTATATTACACAGTTCCACTTATTCAGGAAATGGAATCCAGAATCATGATCCCACTG
AAGACCTCGCCCCTCCAG

ORF Protein

Cloned ORF protein sequence for pF1KE0184 Download

>KIEE0184  286 aa
MAARVLRARGAAWAGGLLQRAAPCSLLPRLRTWTSSSNRSREDSWLKSLFVRKVDPRKDA
HSNLLAKKETSNLYKLQFHNVKPECLEAYNKICQEVLPKIHEDKHYPCTLVGTWNTWYGE
QDQAVHLWRYEGGYPALTEVMNKLRENKEFLEFRKARSDMLLSRKNQLLLEFSFWNEPVP
RSGPNIYELRSYQLRPGTMIEWGNYWARAIRFRQDGNEAVGGFFSQIGQLYMVHHLWAYR
DLQTREDIRNAAWHKHGWEELVYYTVPLIQEMESRIMIPLKTSPLQ

ORF+Vector

Nucleotide Sequence (with vector) for pF1KE0184 Download

>pF1KE0184  3971 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGGCGGCGCGA
GTGCTGCGCGCCCGCGGAGCGGCCTGGGCCGGCGGCCTCCTGCAGCGGGCGGCCCCCTGC
AGCCTCCTGCCCAGGCTCCGGACATGGACATCTTCCAGCAACAGATCTCGAGAAGACAGC
TGGCTAAAATCCTTATTTGTCCGGAAAGTTGATCCAAGAAAAGATGCCCACTCCAATCTC
CTAGCCAAAAAGGAAACAAGCAATCTATACAAATTACAGTTTCACAATGTTAAACCGGAA
TGCCTAGAAGCATACAACAAAATTTGTCAAGAGGTGTTGCCAAAGATTCACGAAGATAAA
CACTACCCTTGTACTTTGGTGGGGACTTGGAACACGTGGTATGGCGAGCAGGACCAAGCT
GTCCACCTCTGGAGGTATGAAGGAGGCTATCCAGCCCTCACAGAAGTCATGAATAAACTC
AGAGAAAATAAGGAATTTTTGGAATTTCGTAAGGCAAGAAGTGACATGCTTCTCTCCAGG
AAGAATCAGCTCCTGTTGGAGTTCAGTTTCTGGAATGAGCCTGTGCCAAGATCCGGACCT
AATATATATGAACTCAGGTCTTACCAACTCCGACCAGGAACCATGATTGAATGGGGCAAT
TACTGGGCTCGTGCAATCCGCTTCAGACAGGATGGTAACGAAGCCGTCGGAGGATTCTTC
TCTCAGATTGGGCAGCTGTACATGGTGCACCATCTTTGGGCTTACAGGGATCTTCAGACC
AGGGAAGACATACGGAATGCAGCATGGCACAAACATGGCTGGGAGGAATTGGTATATTAC
ACAGTTCCACTTATTCAGGAAATGGAATCCAGAATCATGATCCCACTGAAGACCTCGCCC
CTCCAGGTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGG
CATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCAC
CGCTGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTT
GCTGAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTA
TCGCCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGT
CCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTT
CTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCT
TCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAAC
TGGATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAG
ACAGGATGACGGTCGTTTCGCATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCC
GCTTGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGAT
GCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTG
TCCGGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACG
GGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTA
TTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTA
TCCATCATGGCTGATGCAATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTC
GACCACCAAGCGAAACATCGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTC
GATCAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGG
CTCAAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTG
CCGAATATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGT
GTGGCGGACCGCTATCAGGACATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGC
GGCGAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGC
ATCGCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGA
CCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCAC
AGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAA
CCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCA
CAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGC
GTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATA
CCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTA
TCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCA
GCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGA
CTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGG
TGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGG
TATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGG
CAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAG
AAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAA
CGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGAT
CCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAA
ACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGG
TTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTG
GTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGC
GTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAA
ACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGAT
ACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAG
CGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGG
TAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGG
CTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGA
GTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGC
GGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGG
ATGGCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATG
TATCCGCTCAT