POU5F2 ORF clone FXC03892

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Flexi ORF Clone FXC03892

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Clone info.

Species

human

Clone Name

pF1KB0916 Sequence (with vector) Restriction Map

Product ID

FXC03892

HaloTag Clone PID

FHC03892

ORF Sequence

DNA sequence (984 bp)
Protein sequence (328 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB527965]

Gene

KIBB0916

Symbol

POU5F2

Alias : SPRM-1

Description

POU domain class 5, transcription factor 2

Original Clone ID

cs02016

Features of the cloned ORF sequence

Description

Length: 984 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 328 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS59489.1 4.6e-112 100.0 POU5F2 CCDS34391.1 1.1e-28 47.6 POU5F1 CCDS55274.1 2e-27 47.8 POU5F1B CCDS47398.2 1.4e-21 51.9 POU5F1 CCDS14450.1 4.6e-19 39.3 POU3F4 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR013847 137 154 PR00028 POU IPR013847 160 173 PR00028 POU IPR013847 176 191 PR00028 POU IPR013847 209 229 PR00028 POU IPR013847 244 259 PR00028 POU HMMPfam IPR000327 123 192 PF00157 POU-specific IPR001356 223 261 PF00046 Homeobox HMMSmart IPR000327 118 192 SM00352 POU-specific IPR001356 210 272 SM00389 Homeobox ProfileScan IPR000327 118 192 PS51179 POU-specific IPR001356 208 268 PS50071 Homeobox
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_002692 360 164177 47.6 98.8 NP_001153014 359 615739 47.8 94.8 NP_002690 451 602479 34.0 88.4 XP_011541043 403 607394 34.3 80.5 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB0916 Download

>KIBB0916  984 bp
ATGGCCGGACACAGGCCCTCAAACCACTTCTGCCCCCTTCCAGGCAGTGGTGGGGGCGGC
CCCAGAGGGCCGATGCCCCTGCGGGTTGACACTCTGACCTGGTTGAGCACCCAGGCGGCC
CCTGGCAGGGTGATGGTCTGGCCGGCAGTCAGGCCAGGGATCTGCCCAGGCCCTGACGTG
TGGAGGATTCCCCTGGGTCCCCTGCCACACGAATTCCGGGGCTGGATAGCACCCTGCAGG
CCCCGTCTTGGAGCTAGTGAGGCAGGGGACTGGTTGCGACGCCCCTCCGAAGGCGCCCTC
CCGGGGCCCTACATTGCCCTGCGGAGCATTCCGAAGTTGCCGCCGCCAGAGGACATCTCG
GGCATACTGAAAGAGTTGCAGCAATTGGCCAAGGAGTTGAGGCAGAAGAGGTTGAGCCTA
GGGTACTCGCAGGCCGATGTGGGGATCGCTGTGGGAGCTCTGTTTGGGAAGGTGCTTAGC
CAGACGACCATCTGCCGCTTCGAGGCCCAGCAGCTAAGCGTCGCCAACATGTGGAAGCTG
CGACCACTGCTGAAAAAGTGGCTGAAGGAAGTGGAAGCAGAGAACCTTCTGGGCTTATGC
AAAATGGAGATGATCCTGCAACAGTCTGGGAAGTGGAGACGGGCAAGCAGAGAGCGACGA
ATCGGAAACAGCCTGGAGAAATTCTTCCAGCGGTGCCCTAAGCCCACACCCCAGCAAATC
AGCCACATTGCTGGGTGCCTCCAGCTGCAGAAGGATGTGGTTCGAGTTTGGTTCTATAAC
CGCAGCAAGATGGGCAGTCGACCAACCAATGATGCTTCCCCACGGGAGATTGTGGGGACA
GCCGGGCCTCCTTGCCCAGGAGCACCAGTGTGCTTTCACCTGGGACTGGGGCTCCCAGTG
GATATCCCCCACTATACACGTCTCTACTCTGCAGGGGTAGCCCACTCCTCTGCCCCAGCC
ACCACTCTGGGCCTCCTCAGATTT

ORF Protein

Cloned ORF protein sequence for pF1KB0916 Download

>KIBB0916  328 aa
MAGHRPSNHFCPLPGSGGGGPRGPMPLRVDTLTWLSTQAAPGRVMVWPAVRPGICPGPDV
WRIPLGPLPHEFRGWIAPCRPRLGASEAGDWLRRPSEGALPGPYIALRSIPKLPPPEDIS
GILKELQQLAKELRQKRLSLGYSQADVGIAVGALFGKVLSQTTICRFEAQQLSVANMWKL
RPLLKKWLKEVEAENLLGLCKMEMILQQSGKWRRASRERRIGNSLEKFFQRCPKPTPQQI
SHIAGCLQLQKDVVRVWFYNRSKMGSRPTNDASPREIVGTAGPPCPGAPVCFHLGLGLPV
DIPHYTRLYSAGVAHSSAPATTLGLLRF

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB0916 Download

>pF1KB0916  4097 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGGCCGGACAC
AGGCCCTCAAACCACTTCTGCCCCCTTCCAGGCAGTGGTGGGGGCGGCCCCAGAGGGCCG
ATGCCCCTGCGGGTTGACACTCTGACCTGGTTGAGCACCCAGGCGGCCCCTGGCAGGGTG
ATGGTCTGGCCGGCAGTCAGGCCAGGGATCTGCCCAGGCCCTGACGTGTGGAGGATTCCC
CTGGGTCCCCTGCCACACGAATTCCGGGGCTGGATAGCACCCTGCAGGCCCCGTCTTGGA
GCTAGTGAGGCAGGGGACTGGTTGCGACGCCCCTCCGAAGGCGCCCTCCCGGGGCCCTAC
ATTGCCCTGCGGAGCATTCCGAAGTTGCCGCCGCCAGAGGACATCTCGGGCATACTGAAA
GAGTTGCAGCAATTGGCCAAGGAGTTGAGGCAGAAGAGGTTGAGCCTAGGGTACTCGCAG
GCCGATGTGGGGATCGCTGTGGGAGCTCTGTTTGGGAAGGTGCTTAGCCAGACGACCATC
TGCCGCTTCGAGGCCCAGCAGCTAAGCGTCGCCAACATGTGGAAGCTGCGACCACTGCTG
AAAAAGTGGCTGAAGGAAGTGGAAGCAGAGAACCTTCTGGGCTTATGCAAAATGGAGATG
ATCCTGCAACAGTCTGGGAAGTGGAGACGGGCAAGCAGAGAGCGACGAATCGGAAACAGC
CTGGAGAAATTCTTCCAGCGGTGCCCTAAGCCCACACCCCAGCAAATCAGCCACATTGCT
GGGTGCCTCCAGCTGCAGAAGGATGTGGTTCGAGTTTGGTTCTATAACCGCAGCAAGATG
GGCAGTCGACCAACCAATGATGCTTCCCCACGGGAGATTGTGGGGACAGCCGGGCCTCCT
TGCCCAGGAGCACCAGTGTGCTTTCACCTGGGACTGGGGCTCCCAGTGGATATCCCCCAC
TATACACGTCTCTACTCTGCAGGGGTAGCCCACTCCTCTGCCCCAGCCACCACTCTGGGC
CTCCTCAGATTTGTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACC
TGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGC
TGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGG
TTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTC
TAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTC
CCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACT
GGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCG
TGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAA
GTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCTGAT
CAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAACAAGATGGATTGCACGCAGGTTCT
CCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAACAGACAATCGGCTGC
TCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACC
GACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCC
ACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGG
CTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAG
AAAGTATCCATCATGGCTGATGCAATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGC
CCATTCGACCACCAAGCGAAACATCGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGT
CTTGTCGATCAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTC
GCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACTCATGGCGATGCC
TGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGG
CTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTGGCTACCCGTGATATTGCTGAAGAG
CTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCG
CAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCG
AAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTT
ATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGC
CAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGA
GCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATA
CCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTAC
CGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTG
TAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCC
CGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAG
ACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGT
AGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGT
ATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTG
ATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTAC
GCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCA
GTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCAC
CTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGAT
GGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACC
CTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTT
CGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAG
CGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCG
AGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAG
CCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGG
CAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGC
CGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAAC
GAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTC
TCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAG
GGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCC
TGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTTTTCTAAATACATTCA
AATATGTATCCGCTCAT