TRIM52 ORF clone FXC03821

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Flexi ORF Clone FXC03821

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Clone info.

Species

human

Clone Name

pF1KB0902 Sequence (with vector) Restriction Map

Product ID

FXC03821

HaloTag Clone PID

FHC03821

ORF Sequence

DNA sequence (891 bp)
Protein sequence (297 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB527894]

Gene

KIBB0902

Symbol

TRIM52

Alias : RNF102

Description

tripartite motif containing 52

Original Clone ID

cs02002

Features of the cloned ORF sequence

Description

Length: 891 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 297 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS4467.1 4.5e-87 100.0 TRIM52 CCDS4465.1 1.4e-46 65.1 TRIM41 CCDS4466.1 1.7e-46 65.1 TRIM41 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR018957 20 50 PF00097 Zinc finger IPR000315 223 263 PF00643 Zinc finger HMMSmart IPR001841 20 186 SM00184 Zinc finger IPR000315 222 263 SM00336 Zinc finger ProfileScan IPR001841 20 46 PS50089 Zinc finger IPR000315 222 263 PS50119 Zinc finger
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_963921 518 610530 65.1 91.2 XP_006714995 520 610530 65.1 91.2 XP_006714994 525 610530 65.1 91.2 XP_006714993 541 610530 65.1 91.2 XP_006714992 543 610530 65.1 91.2 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB0902 Download

>KIBB0902  891 bp
ATGGCTGGTTATGCCACTACTCCCAGCCCCATGCAGACCCTTCAGGAGGAAGCGGTGTGT
GCCATCTGCTTGGATTACTTCAAGGACCCCGTGTCCATCAGCTGTGGGCACAACTTCTGC
CGAGGGTGTGTGACCCAGCTGTGGAGTAAGGAGGACGAGGAGGACCAGAACGAGGAGGAA
GATGAATGGGAGGAGGAGGAGGACGAGGAAGCGGTGGGGGCCATGGATGGATGGGACGGC
TCCATTCGAGAGGTGTTGTATCGGGGGAATGCTGACGAAGAGTTGTTCCAAGACCAAGAT
GACGATGAACTCTGGCTCGGTGACAGTGGTATAACTAATTGGGACAACGTAGACTATATG
TGGGACGAGGAGGAAGAAGAAGAAGAGGAAGATCAGGACTATTACCTAGGAGGCTTGAGA
CCTGACCTGAGAATTGATGTCTACCGAGAAGAAGAAATACTGGAAGCATACGATGAGGAC
GAAGATGAAGAGCTGTATCCTGACATCCACCCGCCTCCTTCCTTGCCCCTTCCAGGGCAG
TTCACCTGCCCCCAGTGCCGAAAGAGCTTTACACGTCGCAGCTTTCGTCCCAACTTGCAG
CTGGCCAACATGGTCCAGATAATTCGCCAGATGTGCCCCACTCCTTATCGGGGAAACCGG
AGTAATGATCAGGGCATGTGCTTTAAACACCAGGAAGCCCTGAAACTCTTCTGTGAGGTG
GACAAAGAGGCCATCTGTGTGGTGTGCCGAGAATCCAGGAGCCACAAACAGCACAGCGTG
CTGCCTTTGGAGGAGGTGGTGCAGGAGTACCAGGAAATAAAGTTGGAAACAACTCTGGTG
GGAATACTTCAGATAGAGCAAGAAAGCATTCACAGCAAGGCCTATAATCAG

ORF Protein

Cloned ORF protein sequence for pF1KB0902 Download

>KIBB0902  297 aa
MAGYATTPSPMQTLQEEAVCAICLDYFKDPVSISCGHNFCRGCVTQLWSKEDEEDQNEEE
DEWEEEEDEEAVGAMDGWDGSIREVLYRGNADEELFQDQDDDELWLGDSGITNWDNVDYM
WDEEEEEEEEDQDYYLGGLRPDLRIDVYREEEILEAYDEDEDEELYPDIHPPPSLPLPGQ
FTCPQCRKSFTRRSFRPNLQLANMVQIIRQMCPTPYRGNRSNDQGMCFKHQEALKLFCEV
DKEAICVVCRESRSHKQHSVLPLEEVVQEYQEIKLETTLVGILQIEQESIHSKAYNQ

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB0902 Download

>pF1KB0902  4004 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGGCTGGTTAT
GCCACTACTCCCAGCCCCATGCAGACCCTTCAGGAGGAAGCGGTGTGTGCCATCTGCTTG
GATTACTTCAAGGACCCCGTGTCCATCAGCTGTGGGCACAACTTCTGCCGAGGGTGTGTG
ACCCAGCTGTGGAGTAAGGAGGACGAGGAGGACCAGAACGAGGAGGAAGATGAATGGGAG
GAGGAGGAGGACGAGGAAGCGGTGGGGGCCATGGATGGATGGGACGGCTCCATTCGAGAG
GTGTTGTATCGGGGGAATGCTGACGAAGAGTTGTTCCAAGACCAAGATGACGATGAACTC
TGGCTCGGTGACAGTGGTATAACTAATTGGGACAACGTAGACTATATGTGGGACGAGGAG
GAAGAAGAAGAAGAGGAAGATCAGGACTATTACCTAGGAGGCTTGAGACCTGACCTGAGA
ATTGATGTCTACCGAGAAGAAGAAATACTGGAAGCATACGATGAGGACGAAGATGAAGAG
CTGTATCCTGACATCCACCCGCCTCCTTCCTTGCCCCTTCCAGGGCAGTTCACCTGCCCC
CAGTGCCGAAAGAGCTTTACACGTCGCAGCTTTCGTCCCAACTTGCAGCTGGCCAACATG
GTCCAGATAATTCGCCAGATGTGCCCCACTCCTTATCGGGGAAACCGGAGTAATGATCAG
GGCATGTGCTTTAAACACCAGGAAGCCCTGAAACTCTTCTGTGAGGTGGACAAAGAGGCC
ATCTGTGTGGTGTGCCGAGAATCCAGGAGCCACAAACAGCACAGCGTGCTGCCTTTGGAG
GAGGTGGTGCAGGAGTACCAGGAAATAAAGTTGGAAACAACTCTGGTGGGAATACTTCAG
ATAGAGCAAGAAAGCATTCACAGCAAGGCCTATAATCAGGTTTAAACGAATTCGAGCTCG
GTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAA
AGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCT
TGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGGTTC
GCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGCTAC
CTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCAT
CCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCC
CTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCC
TCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGGATC
TGATGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGGTCGTTTCGCATGCTT
GAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGCTAT
GACTGGGCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAG
GGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAGGAC
GAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTCGAC
GTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGATCTC
CTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCAATGCGGCGG
CTGCATACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCGAAACATCGCATCGAG
CGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAGCAT
CAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGTGAG
GATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATGGTGGAAAATGGCCGC
TTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATAGCG
TTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTCGTG
CTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGACGAG
TTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCAACCGGTATC
AGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAA
CATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTT
TTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTG
GCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCG
CTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAG
CGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTC
CAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAA
CTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGG
TAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCC
TAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTAC
CTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGG
TTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTT
GATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGT
CATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAAC
GCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGA
TTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAAT
TTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCT
GCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCC
ACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTC
CGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGG
TCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCC
GAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGT
AGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTT
TTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATT
TGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCA
GGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTC
TTTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCAT