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SpecieshumanProduct IDFXC03604Cloning SiteSgfI-PmeIGeneKIBB6202SymbolZNF175
Alias : OTK18Descriptionzinc finger protein 175Original Clone IDcs00802
Length: 2133 bp
Restriction map A
Restriction map B
Genomic Structure
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Length: 711 aa
Result of homology search against CCDS protein database (
FASTA output,
Multiple alignment)
Entry Exp ID% symbol CCDS12837.1 5.7e-150 100.0 ZNF175 CCDS43933.1 6.2e-76 55.5 ZNF81 CCDS14279.1 1.3e-73 52.0 ZNF41 CCDS31940.1 9.1e-59 44.7 ZNF84 CCDS4624.1 2e-58 43.0 ZNF184
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)
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Result of InterProScan
Search method interpro_ID From To Entry Definition HMMPfam IPR001909 27 67 PF01352 Krueppel-associated box IPR007087 336 357 PF00096 Zinc finger IPR007087 391 413 PF00096 Zinc finger IPR007087 419 441 PF00096 Zinc finger IPR007087 475 497 PF00096 Zinc finger IPR007087 503 525 PF00096 Zinc finger IPR007087 559 581 PF00096 Zinc finger IPR007087 587 609 PF00096 Zinc finger IPR007087 615 637 PF00096 Zinc finger IPR007087 643 665 PF00096 Zinc finger IPR007087 671 693 PF00096 Zinc finger HMMSmart IPR001909 27 87 SM00349 Krueppel-associated box IPR015880 250 273 SM00355 Zinc finger IPR015880 335 357 SM00355 Zinc finger IPR015880 363 385 SM00355 Zinc finger IPR015880 391 413 SM00355 Zinc finger IPR015880 419 441 SM00355 Zinc finger IPR015880 447 469 SM00355 Zinc finger IPR015880 475 497 SM00355 Zinc finger IPR015880 503 525 SM00355 Zinc finger IPR015880 531 553 SM00355 Zinc finger IPR015880 559 581 SM00355 Zinc finger IPR015880 587 609 SM00355 Zinc finger IPR015880 615 637 SM00355 Zinc finger IPR015880 643 665 SM00355 Zinc finger IPR015880 671 693 SM00355 Zinc finger ProfileScan IPR001909 27 98 PS50805 Krueppel-associated box IPR007087 279 302 PS50157 Zinc finger IPR007087 307 334 PS50157 Zinc finger IPR007087 335 362 PS50157 Zinc finger IPR007087 363 390 PS50157 Zinc finger IPR007087 391 418 PS50157 Zinc finger IPR007087 419 446 PS50157 Zinc finger IPR007087 447 474 PS50157 Zinc finger IPR007087 475 502 PS50157 Zinc finger IPR007087 503 530 PS50157 Zinc finger IPR007087 531 558 PS50157 Zinc finger IPR007087 559 586 PS50157 Zinc finger IPR007087 587 614 PS50157 Zinc finger IPR007087 615 642 PS50157 Zinc finger IPR007087 643 670 PS50157 Zinc finger IPR007087 671 698 PS50157 Zinc finger
Result of homology search against disease genes in OMIM database(FASTA output,
Multiple alignment)
H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_009078 711 601139 100.0 100.0 XP_016882738 656 601139 100.0 92.3 XP_016884976 661 300498,314998 55.5 93.7 NP_009068 661 300498,314998 55.5 93.7 XP_005272657 661 300498,314998 55.5 93.7 Inquiries or Suggestions ?
Send a message to flexiclone AT kazusagt.comCloned ORF Nucleotide sequence for pF1KB6202 Download>KIBB6202 2133 bp ATGCCTGCTGATGTGAATTTATCCCAGAAGCCTCAGGTCCTGGGTCCAGAGAAGCAGGAT GGATCTTGCGAGGCATCAGTGTCATTTGAGGACGTGACCGTGGACTTCAGCAGGGAGGAG TGGCAGCAACTGGACCCTGCCCAGAGATGCCTGTACCGGGATGTGATGCTGGAGCTCTAT AGCCATCTCTTCGCAGTGGGGTATCACATTCCCAACCCAGAGGTCATCTTCAGAATGCTA AAAGAAAAGGAGCCGCGTGTGGAGGAGGCTGAAGTCTCACATCAGAGGTGTCAAGAAAGG GAGTTTGGGCTTGAAATCCCACAAAAGGAGATTTCTAAGAAAGCTTCATTTCAAAAGGAT ATGGTAGGTGAGTTCACAAGAGATGGTTCATGGTGTTCCATTTTAGAAGAACTGAGGCTG GATGCTGACCGCACAAAGAAAGATGAGCAAAATCAAATTCAACCCATGAGTCACAGTGCT TTCTTCAACAAGAAAACATTGAACACAGAAAGCAATTGTGAATATAAGGACCCTGGGAAA ATGATTCGCACGAGGCCCCACCTTGCTTCTTCACAGAAACAACCTCAGAAATGTTGCTTA TTTACAGAAAGTTTGAAGCTGAACCTAGAAGTGAACGGTCAGAATGAAAGCAATGACACA GAACAGCTTGATGACGTTGTTGGGTCTGGTCAGCTATTCAGCCATAGCTCTTCTGATGCC TGCAGCAAGAATATTCATACAGGAGAGACATTTTGCAAAGGTAACCAGTGTAGAAAAGTC TGTGGCCATAAACAGTCACTCAAGCAACATCAAATTCATACTCAGAAGAAACCAGATGGA TGTTCTGAATGTGGGGGGAGCTTCACCCAGAAGTCACACCTCTTTGCCCAACAGAGAATT CATAGTGTAGGAAACCTCCATGAATGTGGCAAATGTGGAAAAGCCTTCATGCCACAACTA AAACTCAGTGTATATCTGACAGATCATACAGGTGATATACCCTGTATATGCAAGGAATGT GGGAAGGTCTTTATTCAGAGATCAGAATTGCTTACGCACCAGAAAACACACACTAGAAAG AAGCCCTATAAATGCCATGACTGTGGAAAAGCCTTTTTCCAGATGTTATCTCTCTTCAGA CATCAGAGAACTCACAGTAGAGAAAAACTCTATGAATGCAGTGAATGTGGCAAAGGCTTC TCCCAAAACTCAACCCTCATTATACATCAGAAAATTCATACTGGTGAGAGACAGTATGCA TGCAGTGAATGTGGGAAAGCCTTTACCCAGAAGTCAACACTCAGCTTGCACCAGAGAATC CACTCAGGGCAGAAGTCCTATGTGTGTATCGAATGCGGGCAGGCCTTCATCCAGAAGGCA CACCTGATTGTCCATCAAAGAAGCCACACAGGAGAAAAACCTTATCAGTGCCACAACTGT GGGAAATCCTTCATTTCCAAGTCACAGCTTGATATACATCATCGAATTCATACAGGGGAG AAACCTTATGAATGCAGTGACTGTGGAAAAACCTTCACCCAAAAGTCACACCTGAATATA CACCAGAAAATTCATACTGGAGAAAGACACCATGTATGCAGTGAATGCGGGAAAGCCTTC AACCAGAAGTCAATACTCAGCATGCATCAGAGAATTCACACCGGAGAGAAGCCTTACAAA TGCAGTGAATGTGGGAAAGCCTTCACTTCTAAGTCTCAATTCAAAGAGCATCAGCGAATT CACACGGGTGAGAAACCCTATGTGTGCACTGAATGTGGGAAGGCCTTCAACGGCAGGTCA AATTTCCATAAACATCAAATAACTCACACTAGAGAGAGGCCTTTTGTCTGTTACAAATGT GGGAAGGCTTTTGTCCAGAAATCAGAGTTGATTACCCATCAAAGAACTCACATGGGAGAG AAACCCTATGAATGCCTTGACTGTGGGAAATCGTTCAGTAAGAAACCACAACTCAAGGTG CATCAGCGAATTCACACGGGAGAAAGACCTTATGTGTGTTCTGAATGTGGAAAGGCCTTC AACAACAGGTCAAACTTCAATAAACACCAAACAACTCATACCAGAGACAAATCTTACAAA TGCAGTTATTCTGTGAAAGGCTTTACCAAGCAA
Cloned ORF protein sequence for pF1KB6202 Download>KIBB6202 711 aa MPADVNLSQKPQVLGPEKQDGSCEASVSFEDVTVDFSREEWQQLDPAQRCLYRDVMLELY SHLFAVGYHIPNPEVIFRMLKEKEPRVEEAEVSHQRCQEREFGLEIPQKEISKKASFQKD MVGEFTRDGSWCSILEELRLDADRTKKDEQNQIQPMSHSAFFNKKTLNTESNCEYKDPGK MIRTRPHLASSQKQPQKCCLFTESLKLNLEVNGQNESNDTEQLDDVVGSGQLFSHSSSDA CSKNIHTGETFCKGNQCRKVCGHKQSLKQHQIHTQKKPDGCSECGGSFTQKSHLFAQQRI HSVGNLHECGKCGKAFMPQLKLSVYLTDHTGDIPCICKECGKVFIQRSELLTHQKTHTRK KPYKCHDCGKAFFQMLSLFRHQRTHSREKLYECSECGKGFSQNSTLIIHQKIHTGERQYA CSECGKAFTQKSTLSLHQRIHSGQKSYVCIECGQAFIQKAHLIVHQRSHTGEKPYQCHNC GKSFISKSQLDIHHRIHTGEKPYECSDCGKTFTQKSHLNIHQKIHTGERHHVCSECGKAF NQKSILSMHQRIHTGEKPYKCSECGKAFTSKSQFKEHQRIHTGEKPYVCTECGKAFNGRS NFHKHQITHTRERPFVCYKCGKAFVQKSELITHQRTHMGEKPYECLDCGKSFSKKPQLKV HQRIHTGERPYVCSECGKAFNNRSNFNKHQTTHTRDKSYKCSYSVKGFTKQ
Nucleotide Sequence (with vector) for pF1KB6202 Download>pF1KB6202 5246 bp GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGCCTGCTGAT GTGAATTTATCCCAGAAGCCTCAGGTCCTGGGTCCAGAGAAGCAGGATGGATCTTGCGAG GCATCAGTGTCATTTGAGGACGTGACCGTGGACTTCAGCAGGGAGGAGTGGCAGCAACTG GACCCTGCCCAGAGATGCCTGTACCGGGATGTGATGCTGGAGCTCTATAGCCATCTCTTC GCAGTGGGGTATCACATTCCCAACCCAGAGGTCATCTTCAGAATGCTAAAAGAAAAGGAG CCGCGTGTGGAGGAGGCTGAAGTCTCACATCAGAGGTGTCAAGAAAGGGAGTTTGGGCTT GAAATCCCACAAAAGGAGATTTCTAAGAAAGCTTCATTTCAAAAGGATATGGTAGGTGAG TTCACAAGAGATGGTTCATGGTGTTCCATTTTAGAAGAACTGAGGCTGGATGCTGACCGC ACAAAGAAAGATGAGCAAAATCAAATTCAACCCATGAGTCACAGTGCTTTCTTCAACAAG AAAACATTGAACACAGAAAGCAATTGTGAATATAAGGACCCTGGGAAAATGATTCGCACG AGGCCCCACCTTGCTTCTTCACAGAAACAACCTCAGAAATGTTGCTTATTTACAGAAAGT TTGAAGCTGAACCTAGAAGTGAACGGTCAGAATGAAAGCAATGACACAGAACAGCTTGAT GACGTTGTTGGGTCTGGTCAGCTATTCAGCCATAGCTCTTCTGATGCCTGCAGCAAGAAT ATTCATACAGGAGAGACATTTTGCAAAGGTAACCAGTGTAGAAAAGTCTGTGGCCATAAA CAGTCACTCAAGCAACATCAAATTCATACTCAGAAGAAACCAGATGGATGTTCTGAATGT GGGGGGAGCTTCACCCAGAAGTCACACCTCTTTGCCCAACAGAGAATTCATAGTGTAGGA AACCTCCATGAATGTGGCAAATGTGGAAAAGCCTTCATGCCACAACTAAAACTCAGTGTA TATCTGACAGATCATACAGGTGATATACCCTGTATATGCAAGGAATGTGGGAAGGTCTTT ATTCAGAGATCAGAATTGCTTACGCACCAGAAAACACACACTAGAAAGAAGCCCTATAAA TGCCATGACTGTGGAAAAGCCTTTTTCCAGATGTTATCTCTCTTCAGACATCAGAGAACT CACAGTAGAGAAAAACTCTATGAATGCAGTGAATGTGGCAAAGGCTTCTCCCAAAACTCA ACCCTCATTATACATCAGAAAATTCATACTGGTGAGAGACAGTATGCATGCAGTGAATGT GGGAAAGCCTTTACCCAGAAGTCAACACTCAGCTTGCACCAGAGAATCCACTCAGGGCAG AAGTCCTATGTGTGTATCGAATGCGGGCAGGCCTTCATCCAGAAGGCACACCTGATTGTC CATCAAAGAAGCCACACAGGAGAAAAACCTTATCAGTGCCACAACTGTGGGAAATCCTTC ATTTCCAAGTCACAGCTTGATATACATCATCGAATTCATACAGGGGAGAAACCTTATGAA TGCAGTGACTGTGGAAAAACCTTCACCCAAAAGTCACACCTGAATATACACCAGAAAATT CATACTGGAGAAAGACACCATGTATGCAGTGAATGCGGGAAAGCCTTCAACCAGAAGTCA ATACTCAGCATGCATCAGAGAATTCACACCGGAGAGAAGCCTTACAAATGCAGTGAATGT GGGAAAGCCTTCACTTCTAAGTCTCAATTCAAAGAGCATCAGCGAATTCACACGGGTGAG AAACCCTATGTGTGCACTGAATGTGGGAAGGCCTTCAACGGCAGGTCAAATTTCCATAAA CATCAAATAACTCACACTAGAGAGAGGCCTTTTGTCTGTTACAAATGTGGGAAGGCTTTT GTCCAGAAATCAGAGTTGATTACCCATCAAAGAACTCACATGGGAGAGAAACCCTATGAA TGCCTTGACTGTGGGAAATCGTTCAGTAAGAAACCACAACTCAAGGTGCATCAGCGAATT CACACGGGAGAAAGACCTTATGTGTGTTCTGAATGTGGAAAGGCCTTCAACAACAGGTCA AACTTCAATAAACACCAAACAACTCATACCAGAGACAAATCTTACAAATGCAGTTATTCT GTGAAAGGCTTTACCAAGCAAGTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCTCTA GAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGA GTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAAACGGGT CTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAAAAC CGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGCGCT TGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTT CTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTT GCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAG CCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGATCA AGATCTGATCAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAACAAGATGGATTGCAC GCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAACAGACA ATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTT GTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTATCG TGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCGGGA AGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTTGCT CCTGCCGAGAAAGTATCCATCATGGCTGATGCAATGCGGCGGCTGCATACGCTTGATCCG GCTACCTGCCCATTCGACCACCAAGCGAAACATCGCATCGAGCGAGCACGCACTCGGATG GAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCAGCC GAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACTCAT GGCGATGCCTGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATCGAC TGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTGGCTACCCGTGATATT GCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCCGCT CCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGACTC TGGGGTTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGT AATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCA GCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCC CCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACT ATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCT GCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAG CTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCA CGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAA CCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGC GAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAG AAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGG TAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCA GCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTC TGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAG GATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTT CGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTG GCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCG GCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAAC GCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCG TAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGA TCTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTT GCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACG CCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATC AAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGG TGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAAC GGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGA AGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTTTTCTAA ATACATTCAAATATGTATCCGCTCAT
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