CBFA2T3 ORF clone FXC03597

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Flexi ORF Clone FXC03597

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Clone info.

Species

human

Clone Name

pF1KB6175 Sequence (with vector) Restriction Map

Product ID

FXC03597

HaloTag Clone PID

FHC03597

ORF Sequence

DNA sequence (1959 bp)
Protein sequence (653 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB527670]

Gene

KIBB6175

Symbol

CBFA2T3

Alias : ETO2, MTG16, MTGR2, RUNX1T3, ZMYND4

Description

core-binding factor, runt domain, alpha subunit 2; translocated to, 3, transcript variant 1

Original Clone ID

cs00775

Features of the cloned ORF sequence

Description

Length: 1959 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 653 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS10972.1 1.2e-146 100.0 CBFA2T3 CCDS10973.1 4.5e-117 95.8 CBFA2T3 CCDS56544.1 1e-39 70.1 RUNX1T1 CCDS6256.1 5e-39 70.7 RUNX1T1 CCDS75767.1 5.7e-39 70.2 RUNX1T1 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR013289 210 238 PR01875 Eight-Twenty-One IPR013289 244 264 PR01875 Eight-Twenty-One IPR013292 459 471 PR01878 Myeloid transforming gene on chromosome 16 (MTG16) IPR013289 496 524 PR01875 Eight-Twenty-One IPR013289 567 595 PR01875 Eight-Twenty-One IPR013292 595 612 PR01878 Myeloid transforming gene on chromosome 16 (MTG16) IPR013292 630 640 PR01878 Myeloid transforming gene on chromosome 16 (MTG16) HMMPfam IPR003894 172 265 PF07531 TAFH/NHR1 IPR014896 379 445 PF08788 NHR2-like IPR002893 556 592 PF01753 Zinc finger HMMSmart IPR003894 173 263 SM00549 TAFH/NHR1 ProfileScan IPR003894 171 266 PS51119 TAFH/NHR1 IPR002893 556 592 PS50865 Zinc finger
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_005178 653 603870 100.0 100.0 XP_011521721 558 603870 100.0 84.8 XP_005256380 628 603870 96.2 100.0 NP_787127 567 603870 95.8 90.7 XP_016883611 594 603672 57.6 90.8 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB6175 Download

>KIBB6175  1959 bp
ATGCCGGCTTCAAGACTGAGGGACAGGGCAGCCAGTTCAGCCTCGGGATCCACCTGTGGC
TCCATGTCCCAGACGCACCCTGTGCTGGAGAGCGGCCTCCTGGCATCTGCCGGCTGCTCC
GCACCCCGGGGTCCCAGGAAGGGCGGCCCAGCCCCAGTGGACAGGAAAGCTAAGGCCTCA
GCGATGCCGGACTCCCCAGCGGAGGTGAAGACGCAGCCCCGGTCCACACCCCCCAGCATG
CCGCCCCCACCGCCTGCCGCATCCCAGGGGGCCACACGCCCCCCCTCCTTCACGCCACAC
ACACATCGAGAGGACGGGCCTGCGACGCTGCCCCACGGCCGTTTTCATGGCTGCTTAAAA
TGGTCTATGGTCTGTCTCTTGATGAACGGCAGCAGCCACTCACCAACAGCCATCAATGGT
GCACCGTGCACACCCAACGGCTTCAGCAATGGCCCGGCCACCTCGTCCACAGCCTCCTTG
TCCACACAGCACCTGCCCCCAGCCTGCGGGGCCCGGCAGCTCAGCAAGCTCAAGCGCTTC
CTCACCACACTGCAGCAGTTTGGCAGCGACATCTCCCCAGAGATTGGGGAGCGCGTGCGC
ACACTGGTGCTGGGCCTGGTGAACTCGACATTGACGATCGAGGAGTTTCATTCCAAGCTT
CAGGAGGCCACCAACTTCCCTCTGCGGCCGTTTGTCATTCCCTTCCTGAAGGCAAACCTG
CCCTTGCTGCAGCGGGAGCTCCTGCACTGTGCACGCCTGGCCAAGCAGACGCCCGCCCAG
TACTTGGCCCAGCATGAGCAGCTCCTGCTGGACGCCAGCGCCTCCTCCCCCATCGACTCC
TCAGAGCTGCTACTGGAAGTCAACGAGAACGGCAAGAGGAGGACGCCCGACAGGACCAAA
GAGAACGGGTCAGACCGCGACCCGCTGCACCCCGAGCACCTCAGCAAACGGCCATGCACC
CTGAACCCTGCCCAGCGCTACAGCCCCAGCAACGGGCCACCGCAGCCCACACCGCCGCCG
CACTACCGCCTGGAGGACATAGCCATGGCCCACCACTTCCGAGATGCCTACCGCCACCCA
GACCCCCGGGAGCTACGAGAGCGCCATCGGCCGCTTGTGGTGCCTGGGTCCCGGCAGGAA
GAAGTGATCGACCACAAGCTCACAGAGCGTGAGTGGGCAGAAGAGTGGAAGCACCTCAAC
AACCTCCTGAACTGCATCATGGACATGGTGGAGAAGACGCGGCGCTCGCTCACGGTGCTG
CGCAGGTGCCAGGAGGCCGACCGCGAGGAGCTCAACCACTGGGCGCGGCGCTACAGCGAC
GCCGAGGACACAAAGAAGGGCCCCGCTCCCGCCGCGGCCCGGCCCCGCAGCAGCTCCGCC
GGTCCCGAAGGGCCTCAGCTAGACGTGCCTCGCGAGTTCCTGCCGAGGACCCTCACCGGC
TACGTGCCTGAGGACATCTGGAGGAAGGCTGAAGAGGCCGTGAATGAGGTGAAGCGGCAG
GCCATGTCGGAGCTGCAGAAAGCCGTGTCGGACGCGGAGCGCAAAGCGCACGAGCTCATC
ACCACGGAGCGTGCCAAGATGGAGCGGGCCCTGGCCGAGGCGAAGCGGCAGGCCTCCGAG
GACGCCCTGACGGTCATCAACCAGCAGGAGGACTCCAGCGAGAGCTGCTGGAACTGCGGG
CGGAAAGCCAGTGAGACGTGCAGCGGCTGCAACGCGGCACGCTACTGCGGGTCCTTCTGC
CAGCATCGGGACTGGGAGAAGCATCACCACGTGTGTGGCCAGAGCCTGCAGGGCCCCACA
GCCGTGGTGGCCGACCCGGTGCCTGGACCGCCCGAAGCCGCCCACAGCCTGGGCCCCTCC
CTGCCTGTGGGTGCTGCCAGCCCCAGCGAAGCCGGCTCTGCGGGGCCTTCTCGCCCCGGC
TCCCCCAGCCCACCTGGCCCACTGGACACCGTGCCCCGC

ORF Protein

Cloned ORF protein sequence for pF1KB6175 Download

>KIBB6175  653 aa
MPASRLRDRAASSASGSTCGSMSQTHPVLESGLLASAGCSAPRGPRKGGPAPVDRKAKAS
AMPDSPAEVKTQPRSTPPSMPPPPPAASQGATRPPSFTPHTHREDGPATLPHGRFHGCLK
WSMVCLLMNGSSHSPTAINGAPCTPNGFSNGPATSSTASLSTQHLPPACGARQLSKLKRF
LTTLQQFGSDISPEIGERVRTLVLGLVNSTLTIEEFHSKLQEATNFPLRPFVIPFLKANL
PLLQRELLHCARLAKQTPAQYLAQHEQLLLDASASSPIDSSELLLEVNENGKRRTPDRTK
ENGSDRDPLHPEHLSKRPCTLNPAQRYSPSNGPPQPTPPPHYRLEDIAMAHHFRDAYRHP
DPRELRERHRPLVVPGSRQEEVIDHKLTEREWAEEWKHLNNLLNCIMDMVEKTRRSLTVL
RRCQEADREELNHWARRYSDAEDTKKGPAPAAARPRSSSAGPEGPQLDVPREFLPRTLTG
YVPEDIWRKAEEAVNEVKRQAMSELQKAVSDAERKAHELITTERAKMERALAEAKRQASE
DALTVINQQEDSSESCWNCGRKASETCSGCNAARYCGSFCQHRDWEKHHHVCGQSLQGPT
AVVADPVPGPPEAAHSLGPSLPVGAASPSEAGSAGPSRPGSPSPPGPLDTVPR

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB6175 Download

>pF1KB6175  5072 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGCCGGCTTCA
AGACTGAGGGACAGGGCAGCCAGTTCAGCCTCGGGATCCACCTGTGGCTCCATGTCCCAG
ACGCACCCTGTGCTGGAGAGCGGCCTCCTGGCATCTGCCGGCTGCTCCGCACCCCGGGGT
CCCAGGAAGGGCGGCCCAGCCCCAGTGGACAGGAAAGCTAAGGCCTCAGCGATGCCGGAC
TCCCCAGCGGAGGTGAAGACGCAGCCCCGGTCCACACCCCCCAGCATGCCGCCCCCACCG
CCTGCCGCATCCCAGGGGGCCACACGCCCCCCCTCCTTCACGCCACACACACATCGAGAG
GACGGGCCTGCGACGCTGCCCCACGGCCGTTTTCATGGCTGCTTAAAATGGTCTATGGTC
TGTCTCTTGATGAACGGCAGCAGCCACTCACCAACAGCCATCAATGGTGCACCGTGCACA
CCCAACGGCTTCAGCAATGGCCCGGCCACCTCGTCCACAGCCTCCTTGTCCACACAGCAC
CTGCCCCCAGCCTGCGGGGCCCGGCAGCTCAGCAAGCTCAAGCGCTTCCTCACCACACTG
CAGCAGTTTGGCAGCGACATCTCCCCAGAGATTGGGGAGCGCGTGCGCACACTGGTGCTG
GGCCTGGTGAACTCGACATTGACGATCGAGGAGTTTCATTCCAAGCTTCAGGAGGCCACC
AACTTCCCTCTGCGGCCGTTTGTCATTCCCTTCCTGAAGGCAAACCTGCCCTTGCTGCAG
CGGGAGCTCCTGCACTGTGCACGCCTGGCCAAGCAGACGCCCGCCCAGTACTTGGCCCAG
CATGAGCAGCTCCTGCTGGACGCCAGCGCCTCCTCCCCCATCGACTCCTCAGAGCTGCTA
CTGGAAGTCAACGAGAACGGCAAGAGGAGGACGCCCGACAGGACCAAAGAGAACGGGTCA
GACCGCGACCCGCTGCACCCCGAGCACCTCAGCAAACGGCCATGCACCCTGAACCCTGCC
CAGCGCTACAGCCCCAGCAACGGGCCACCGCAGCCCACACCGCCGCCGCACTACCGCCTG
GAGGACATAGCCATGGCCCACCACTTCCGAGATGCCTACCGCCACCCAGACCCCCGGGAG
CTACGAGAGCGCCATCGGCCGCTTGTGGTGCCTGGGTCCCGGCAGGAAGAAGTGATCGAC
CACAAGCTCACAGAGCGTGAGTGGGCAGAAGAGTGGAAGCACCTCAACAACCTCCTGAAC
TGCATCATGGACATGGTGGAGAAGACGCGGCGCTCGCTCACGGTGCTGCGCAGGTGCCAG
GAGGCCGACCGCGAGGAGCTCAACCACTGGGCGCGGCGCTACAGCGACGCCGAGGACACA
AAGAAGGGCCCCGCTCCCGCCGCGGCCCGGCCCCGCAGCAGCTCCGCCGGTCCCGAAGGG
CCTCAGCTAGACGTGCCTCGCGAGTTCCTGCCGAGGACCCTCACCGGCTACGTGCCTGAG
GACATCTGGAGGAAGGCTGAAGAGGCCGTGAATGAGGTGAAGCGGCAGGCCATGTCGGAG
CTGCAGAAAGCCGTGTCGGACGCGGAGCGCAAAGCGCACGAGCTCATCACCACGGAGCGT
GCCAAGATGGAGCGGGCCCTGGCCGAGGCGAAGCGGCAGGCCTCCGAGGACGCCCTGACG
GTCATCAACCAGCAGGAGGACTCCAGCGAGAGCTGCTGGAACTGCGGGCGGAAAGCCAGT
GAGACGTGCAGCGGCTGCAACGCGGCACGCTACTGCGGGTCCTTCTGCCAGCATCGGGAC
TGGGAGAAGCATCACCACGTGTGTGGCCAGAGCCTGCAGGGCCCCACAGCCGTGGTGGCC
GACCCGGTGCCTGGACCGCCCGAAGCCGCCCACAGCCTGGGCCCCTCCCTGCCTGTGGGT
GCTGCCAGCCCCAGCGAAGCCGGCTCTGCGGGGCCTTCTCGCCCCGGCTCCCCCAGCCCA
CCTGGCCCACTGGACACCGTGCCCCGCGTTTAAACGAATTCGAGCTCGGTACCCGGGGAT
CCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGA
AGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAA
ACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCA
TAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTT
TGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCA
CCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGA
GTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTT
GGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGG
GGATCAAGATCTGATCAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAACAAGATGGA
TTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAA
CAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTT
CTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGG
CTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAA
GCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCAC
CTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCAATGCGGCGGCTGCATACGCTT
GATCCGGCTACCTGCCCATTCGACCACCAAGCGAAACATCGCATCGAGCGAGCACGCACT
CGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCG
CCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTG
ACTCATGGCGATGCCTGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTTTCTGGATTC
ATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTGGCTACCCGT
GATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATC
GCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCG
GGACTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAA
GGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAA
AGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCT
CCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGAC
AGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCC
GACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTC
TCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTG
TGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGA
GTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAG
CAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTA
CACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAG
AGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTG
CAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTAC
GGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATC
AAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATG
GCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGT
AATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCG
ATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCG
CTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTG
CCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGA
TCGAGATCTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACA
GAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGT
GAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCA
GGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTT
TGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGA
AGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTA
AGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTT
TTCTAAATACATTCAAATATGTATCCGCTCAT