SOHLH2 ORF clone FXC03491

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Flexi ORF Clone FXC03491

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Clone info.

Species

human

Clone Name

pF1KB6669 Sequence (with vector) Restriction Map

Product ID

FXC03491

HaloTag Clone PID

FHC03491

ORF Sequence

DNA sequence (1275 bp)
Protein sequence (425 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB527575]

Gene

KIBB6669

Symbol

SOHLH2

Alias : SOSF2, SPATA28, TEB1, bHLHe81

Description

spermatogenesis and oogenesis specific basic helix-loop-helix 2, transcript variant 1

Original Clone ID

cs01269

Features of the cloned ORF sequence

Description

Length: 1275 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 425 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS9355.1 3.5e-168 100.0 SOHLH2 CCDS55896.1 3.7e-161 99.8 SOHLH2 CCDS61309.1 2.5e-80 100.0 SOHLH2 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR001092 206 252 PF00010 Helix-loop-helix DNA-binding domain HMMSmart IPR001092 207 258 SM00353 Helix-loop-helix DNA-binding domain ProfileScan IPR001092 197 253 PS50888 Helix-loop-helix DNA-binding domain
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_060296 425 616066 100.0 100.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB6669 Download

>KIBB6669  1275 bp
ATGGCTTCCTCAATTATCTGCCAGGAGCACTGCCAGATCTCGGGCCAGGCAAAAATAGAC
ATCTTATTAGTTGGAGATGTCACTGTGGGCTACCTGGCTGATACTGTACAGAAACTATTT
GCAAACATAGCAGAAGTCACCATCACCATCAGTGACACGAAGGAGGCAGCAGCGCTTTTG
GATGATTGCATATTCAACATGGTTCTCTTGAAGGTGCCTTCTTCACTAAGTGCCGAGGAG
CTGGAAGCCATCAAGTTAATTAGATTTGGCAAAAAGAAAAATACACATTCACTGTTTGTT
TTTATAATCCCTGAAAATTTTAAAGGTTGTATTTCAGGGCATGGAATGGATATTGCTTTA
ACTGAACCACTGACAATGGAAAAAATGAGTAATGTGGTAAAATACTGGACAACATGTCCC
TCAAACACTGTTAAGACTGAAAACGCAACTGGGCCTGAAGAACTTGGATTGCCCCTGCAG
AGGTCCTACAGCGAACACCTGGGATATTTTCCTACTGATCTATTTGCCTGCTCTGAATCT
TTAAGGAATGGCAATGGGCTTGAATTAAATGCTTCGTTGTCAGAGTTCGAGAAAAACAAA
AAGATCTCTCTTCTTCATTCAAGCAAGGAAAAACTAAGAAGGGAAAGAATCAAATATTGC
TGTGAGCAGCTGCGTACTCTCTTGCCGTATGTAAAAGGGAGAAAGAATGATGCGGCTTCA
GTTCTTGAGGCAACAGTTGATTATGTGAAATATATCCGGGAGAAAATCTCTCCAGCCGTT
ATGGCCCAGATTACAGAAGCACTTCAGAGCAACATGAGGTTTTGTAAGAAACAACAAACA
CCCATTGAGCTGTCTCTCCCAGGCACTGTCATGGCACAGCGGGAAAACAGTGTGATGAGC
ACTTACTCCCCTGAGAGAGGGCTCCAATTCCTGACTAATACGTGCTGGAATGGGTGCTCC
ACTCCTGATGCAGAGAGCTCCTTGGATGAAGCTGTGAGAGTTCCATCAAGCTCCGCCTCA
GAGAATGCTATTGGTGATCCATATAAAACTCACATTTCCAGTGCAGCGCTGTCTCTGAAT
TCCTTGCATACTGTCAGATATTATTCTAAAGTCACCCCTTCCTACGATGCAACTGCTGTA
ACAAATCAGAACATTTCAATTCATTTACCTTCAGCCATGCCCCCGGTCTCAAAGCTTCTC
CCTCGGCACTGCACTTCTGGGTTGGGCCAGACGTGCACTACACATCCCAACTGTCTGCAA
CAGTTTTGGGCGTAT

ORF Protein

Cloned ORF protein sequence for pF1KB6669 Download

>KIBB6669  425 aa
MASSIICQEHCQISGQAKIDILLVGDVTVGYLADTVQKLFANIAEVTITISDTKEAAALL
DDCIFNMVLLKVPSSLSAEELEAIKLIRFGKKKNTHSLFVFIIPENFKGCISGHGMDIAL
TEPLTMEKMSNVVKYWTTCPSNTVKTENATGPEELGLPLQRSYSEHLGYFPTDLFACSES
LRNGNGLELNASLSEFEKNKKISLLHSSKEKLRRERIKYCCEQLRTLLPYVKGRKNDAAS
VLEATVDYVKYIREKISPAVMAQITEALQSNMRFCKKQQTPIELSLPGTVMAQRENSVMS
TYSPERGLQFLTNTCWNGCSTPDAESSLDEAVRVPSSSASENAIGDPYKTHISSAALSLN
SLHTVRYYSKVTPSYDATAVTNQNISIHLPSAMPPVSKLLPRHCTSGLGQTCTTHPNCLQ
QFWAY

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB6669 Download

>pF1KB6669  4388 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGGCTTCCTCA
ATTATCTGCCAGGAGCACTGCCAGATCTCGGGCCAGGCAAAAATAGACATCTTATTAGTT
GGAGATGTCACTGTGGGCTACCTGGCTGATACTGTACAGAAACTATTTGCAAACATAGCA
GAAGTCACCATCACCATCAGTGACACGAAGGAGGCAGCAGCGCTTTTGGATGATTGCATA
TTCAACATGGTTCTCTTGAAGGTGCCTTCTTCACTAAGTGCCGAGGAGCTGGAAGCCATC
AAGTTAATTAGATTTGGCAAAAAGAAAAATACACATTCACTGTTTGTTTTTATAATCCCT
GAAAATTTTAAAGGTTGTATTTCAGGGCATGGAATGGATATTGCTTTAACTGAACCACTG
ACAATGGAAAAAATGAGTAATGTGGTAAAATACTGGACAACATGTCCCTCAAACACTGTT
AAGACTGAAAACGCAACTGGGCCTGAAGAACTTGGATTGCCCCTGCAGAGGTCCTACAGC
GAACACCTGGGATATTTTCCTACTGATCTATTTGCCTGCTCTGAATCTTTAAGGAATGGC
AATGGGCTTGAATTAAATGCTTCGTTGTCAGAGTTCGAGAAAAACAAAAAGATCTCTCTT
CTTCATTCAAGCAAGGAAAAACTAAGAAGGGAAAGAATCAAATATTGCTGTGAGCAGCTG
CGTACTCTCTTGCCGTATGTAAAAGGGAGAAAGAATGATGCGGCTTCAGTTCTTGAGGCA
ACAGTTGATTATGTGAAATATATCCGGGAGAAAATCTCTCCAGCCGTTATGGCCCAGATT
ACAGAAGCACTTCAGAGCAACATGAGGTTTTGTAAGAAACAACAAACACCCATTGAGCTG
TCTCTCCCAGGCACTGTCATGGCACAGCGGGAAAACAGTGTGATGAGCACTTACTCCCCT
GAGAGAGGGCTCCAATTCCTGACTAATACGTGCTGGAATGGGTGCTCCACTCCTGATGCA
GAGAGCTCCTTGGATGAAGCTGTGAGAGTTCCATCAAGCTCCGCCTCAGAGAATGCTATT
GGTGATCCATATAAAACTCACATTTCCAGTGCAGCGCTGTCTCTGAATTCCTTGCATACT
GTCAGATATTATTCTAAAGTCACCCCTTCCTACGATGCAACTGCTGTAACAAATCAGAAC
ATTTCAATTCATTTACCTTCAGCCATGCCCCCGGTCTCAAAGCTTCTCCCTCGGCACTGC
ACTTCTGGGTTGGGCCAGACGTGCACTACACATCCCAACTGTCTGCAACAGTTTTGGGCG
TATGTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCAT
GCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGC
TGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCT
GAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCG
CCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCA
GATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTA
CGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCA
AAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGG
ATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACA
GGATGACGGTCGTTTCGCATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCT
TGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCC
GCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCC
GGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGC
GTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTG
GGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCC
ATCATGGCTGATGCAATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGAC
CACCAAGCGAAACATCGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGAT
CAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTC
AAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCG
AATATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTG
GCGGACCGCTATCAGGACATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGC
GAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATC
GCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCG
ACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGA
ATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCG
TAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAA
AAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTT
TCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCT
GTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCT
CAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCC
CGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTT
ATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGC
TACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTAT
CTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAA
ACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAA
AAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGA
AAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCT
TTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACC
ATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTG
CATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTT
TGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTA
CAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACC
GCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACA
GATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGC
GGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAG
TGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTC
AGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTA
GGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGG
CAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATG
GCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTAT
CCGCTCAT