RBM23 ORF clone FXC03478

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Flexi ORF Clone FXC03478

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Clone info.

Species

human

Clone Name

pF1KB6628 Sequence (with vector) Restriction Map

Product ID

FXC03478

HaloTag Clone PID

FHC03478

ORF Sequence

DNA sequence (1218 bp)
Protein sequence (406 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB527562]

Gene

KIBB6628

Symbol

RBM23

Alias : CAPERbeta, PP239, RNPC4

Description

RNA binding motif protein 23, transcript variant 3

Original Clone ID

cs01228

Features of the cloned ORF sequence

Description

Length: 1218 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 406 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS41919.1 1.3e-94 99.5 RBM23 CCDS41920.1 1.1e-66 95.3 RBM23 CCDS41921.1 1.5e-66 91.6 RBM23 CCDS76658.1 6.5e-60 99.3 RBM23 CCDS56186.1 1.1e-49 60.3 RBM39 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR000504 134 199 PF00076 RNA recognition motif domain IPR000504 231 300 PF00076 RNA recognition motif domain HMMSmart IPR000504 133 205 SM00360 RNA recognition motif domain IPR000504 230 303 SM00360 RNA recognition motif domain HMMTigr IPR006509 21 405 TIGR01622 Splicing factor ProfileScan IPR000504 132 209 PS50102 RNA recognition motif domain IPR000504 229 307 PS50102 RNA recognition motif domain
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_001229529 502 604739 60.7 99.3 NP_001229528 508 604739 60.3 99.3 XP_016883627 476 604739 60.3 99.3 NP_004893 524 604739 57.9 99.3 NP_001310353 529 604739 57.9 99.3 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB6628 Download

>KIBB6628  1218 bp
ATGGCATCTGATGACTTTGACATAGTGATTGAGGCCATGCTGGAAGCTCCCTATAAAAAA
GAAGAGGATGAGCAACAAAGGAAAGAAGTTAAAAAGGATTATCCTAGCAATACCACCAGC
AGCACCAGCAACAGTGGCAATGAGACCAGTGGAAGCAGCACCATCGGGGAGACAAGCAAT
CGTAGTCGAGATCGGGATCGGTATAGACGGAGAAATAGTCGGAGCCGAAGTCCAGGTCGG
CAGTGTCGTCACCGTAGCCGTAGCTGGGATCGTCGACATGGTAGTGAGTCGCGAAGTCGG
GACCATCGTCGTGAGGATCGTGTGCATTACAGGAGTCCTCCACTTGCCACTGGGGAGCCA
GTTGATAATCTGAGTCCTGAGGAGCGTGATGCCCGCACAGTTTTCTGTATGCAGTTAGCT
GCCCGAATTCGGCCTCGAGATCTGGAGGACTTTTTCTCTGCTGTAGGCAAGGTTCGCGAT
GTACGTATCATTTCAGATCGGAACTCACGTCGTTCTAAGGGCATTGCCTACGTGGAATTC
TGTGAAATCCAGTCTGTGCCACTGGCCATTGGGCTGACTGGGCAGCGGTTGCTGGGAGTG
CCTATCATTGTACAGGCTTCACAGGCAGAGAAAAACCGACTGGCAGCCATGGCCAACAAC
CTGCAAAAGGGCAATGGTGGACCAATGCGCCTCTATGTGGGTTCCCTGCACTTCAATATC
ACTGAAGACATGCTCCGGGGCATCTTTGAGCCCTTTGGTAAAATTGATAATATTGTCCTG
ATGAAGGACTCAGATACAGGCCGCTCTAAAGGTTATGGTTTCATCACGTTCTCTGATTCT
GAGTGTGCCCGGCGGGCCCTGGAACAGTTGAATGGGTTTGAGCTTGCTGGTCGACCTATG
AGGGTTGGCCATGTGACTGAGCGACTGGATGGTGGCACAGACATCACTTTTCCTGATGGG
GACCAGGAGCTGGATCTGGGATCAGCAGGTGGACGTTTTCAGCTCATGGCAAAACTGGCA
GAAGGCGCTGGAATCCAACTGCCAAGCACTGCTGCTGCTGCTGCTGCCGCCGCCGCCGCC
CAGGCTGCTGCCTTGCAACTGAATGGAGCAGTTCCCTTGGGGGCCCTGAATCCAGCAGCT
CTGACTGCTCTGAGTCCAGCCCTGAACCTTGCCTCCCAGTGTTTGCAGCTCTCCAGCCTC
TTTACCCCCCAGACCATG

ORF Protein

Cloned ORF protein sequence for pF1KB6628 Download

>KIBB6628  406 aa
MASDDFDIVIEAMLEAPYKKEEDEQQRKEVKKDYPSNTTSSTSNSGNETSGSSTIGETSN
RSRDRDRYRRRNSRSRSPGRQCRHRSRSWDRRHGSESRSRDHRREDRVHYRSPPLATGEP
VDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEF
CEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQKGNGGPMRLYVGSLHFNI
TEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPM
RVGHVTERLDGGTDITFPDGDQELDLGSAGGRFQLMAKLAEGAGIQLPSTAAAAAAAAAA
QAAALQLNGAVPLGALNPAALTALSPALNLASQCLQLSSLFTPQTM

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB6628 Download

>pF1KB6628  4331 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGGCATCTGAT
GACTTTGACATAGTGATTGAGGCCATGCTGGAAGCTCCCTATAAAAAAGAAGAGGATGAG
CAACAAAGGAAAGAAGTTAAAAAGGATTATCCTAGCAATACCACCAGCAGCACCAGCAAC
AGTGGCAATGAGACCAGTGGAAGCAGCACCATCGGGGAGACAAGCAATCGTAGTCGAGAT
CGGGATCGGTATAGACGGAGAAATAGTCGGAGCCGAAGTCCAGGTCGGCAGTGTCGTCAC
CGTAGCCGTAGCTGGGATCGTCGACATGGTAGTGAGTCGCGAAGTCGGGACCATCGTCGT
GAGGATCGTGTGCATTACAGGAGTCCTCCACTTGCCACTGGGGAGCCAGTTGATAATCTG
AGTCCTGAGGAGCGTGATGCCCGCACAGTTTTCTGTATGCAGTTAGCTGCCCGAATTCGG
CCTCGAGATCTGGAGGACTTTTTCTCTGCTGTAGGCAAGGTTCGCGATGTACGTATCATT
TCAGATCGGAACTCACGTCGTTCTAAGGGCATTGCCTACGTGGAATTCTGTGAAATCCAG
TCTGTGCCACTGGCCATTGGGCTGACTGGGCAGCGGTTGCTGGGAGTGCCTATCATTGTA
CAGGCTTCACAGGCAGAGAAAAACCGACTGGCAGCCATGGCCAACAACCTGCAAAAGGGC
AATGGTGGACCAATGCGCCTCTATGTGGGTTCCCTGCACTTCAATATCACTGAAGACATG
CTCCGGGGCATCTTTGAGCCCTTTGGTAAAATTGATAATATTGTCCTGATGAAGGACTCA
GATACAGGCCGCTCTAAAGGTTATGGTTTCATCACGTTCTCTGATTCTGAGTGTGCCCGG
CGGGCCCTGGAACAGTTGAATGGGTTTGAGCTTGCTGGTCGACCTATGAGGGTTGGCCAT
GTGACTGAGCGACTGGATGGTGGCACAGACATCACTTTTCCTGATGGGGACCAGGAGCTG
GATCTGGGATCAGCAGGTGGACGTTTTCAGCTCATGGCAAAACTGGCAGAAGGCGCTGGA
ATCCAACTGCCAAGCACTGCTGCTGCTGCTGCTGCCGCCGCCGCCGCCCAGGCTGCTGCC
TTGCAACTGAATGGAGCAGTTCCCTTGGGGGCCCTGAATCCAGCAGCTCTGACTGCTCTG
AGTCCAGCCCTGAACCTTGCCTCCCAGTGTTTGCAGCTCTCCAGCCTCTTTACCCCCCAG
ACCATGGTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGG
CATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCAC
CGCTGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTT
GCTGAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTA
TCGCCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGT
CCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTT
CTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCT
TCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAAC
TGGATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAG
ACAGGATGACGGTCGTTTCGCATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCC
GCTTGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGAT
GCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTG
TCCGGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACG
GGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTA
TTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTA
TCCATCATGGCTGATGCAATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTC
GACCACCAAGCGAAACATCGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTC
GATCAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGG
CTCAAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTG
CCGAATATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGT
GTGGCGGACCGCTATCAGGACATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGC
GGCGAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGC
ATCGCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGA
CCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCAC
AGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAA
CCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCA
CAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGC
GTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATA
CCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTA
TCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCA
GCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGA
CTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGG
TGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGG
TATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGG
CAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAG
AAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAA
CGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGAT
CCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAA
ACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGG
TTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTG
GTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGC
GTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAA
ACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGAT
ACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAG
CGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGG
TAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGG
CTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGA
GTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGC
GGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGG
ATGGCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATG
TATCCGCTCAT