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SpecieshumanProduct IDFXC03454Cloning SiteSgfI-PmeIGeneKIBB6101SymbolTBL1X
Alias : CHNG8, EBI, SMAP55, TBL1Descriptiontransducin (beta)-like 1X-linked, transcript variant 1Original Clone IDcs00701
Length: 1731 bp
Restriction map A
Restriction map B
Genomic Structure
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Length: 577 aa
Result of homology search against CCDS protein database (
FASTA output,
Multiple alignment)
Entry Exp ID% symbol CCDS14133.1 1.7e-158 100.0 TBL1X CCDS48078.1 1.2e-143 100.0 TBL1X CCDS14779.1 1.9e-131 91.0 TBL1Y CCDS46961.1 2.4e-99 86.3 TBL1XR1
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)
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Result of InterProScan
Search method interpro_ID From To Entry Definition FPrintScan IPR020472 247 261 PR00320 G-protein beta WD-40 repeat IPR020472 478 492 PR00320 G-protein beta WD-40 repeat IPR020472 520 534 PR00320 G-protein beta WD-40 repeat HMMPfam IPR013720 57 83 PF08513 LisH dimerisation motif IPR019781 226 260 PF00400 WD40 repeat IPR019781 289 315 PF00400 WD40 repeat IPR019781 322 357 PF00400 WD40 repeat IPR019781 361 396 PF00400 WD40 repeat IPR019781 404 440 PF00400 WD40 repeat IPR019781 445 491 PF00400 WD40 repeat IPR019781 495 533 PF00400 WD40 repeat HMMSmart IPR006594 55 87 SM00667 LisH dimerisation motif IPR001680 221 260 SM00320 WD40 repeat IPR001680 271 316 SM00320 WD40 repeat IPR001680 318 357 SM00320 WD40 repeat IPR001680 360 398 SM00320 WD40 repeat IPR001680 401 440 SM00320 WD40 repeat IPR001680 443 491 SM00320 WD40 repeat IPR001680 494 533 SM00320 WD40 repeat IPR001680 536 574 SM00320 WD40 repeat ProfileScan IPR006594 55 87 PS50896 LisH dimerisation motif IPR019782 228 269 PS50082 WD40 repeat 2 IPR017986 228 542 PS50294 WD40-repeat-containing domain IPR019782 291 315 PS50082 WD40 repeat 2 IPR019782 325 366 PS50082 WD40 repeat 2 IPR019782 408 449 PS50082 WD40 repeat 2 IPR019782 450 500 PS50082 WD40 repeat 2 IPR019782 501 542 PS50082 WD40 repeat 2
Result of homology search against disease genes in OMIM database(FASTA output,
Multiple alignment)
H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_005638 577 300196 100.0 100.0 NP_001132938 577 300196 100.0 100.0 XP_011543873 526 300196 100.0 91.2 NP_001132940 526 300196 100.0 91.2 NP_001132939 526 300196 100.0 91.2 Inquiries or Suggestions ?
Send a message to flexiclone AT kazusagt.comCloned ORF Nucleotide sequence for pF1KB6101 Download>KIBB6101 1731 bp ATGACCGAGCTCGCTGGCGCCTCTTCATCGTGCTGCCACCGCCCTGCAGGAAGAGGGGCC ATGCAGTCAGTCTTGCACCACTTTCAACGTTTGCGAGGGAGAGAGGGTGGTTCCCACTTC ATCAACACCTCATCGCCGCGAGGTGAGGCTAAGATGAGCATAACCAGTGACGAGGTGAAC TTTCTGGTGTATCGGTATCTCCAGGAGTCAGGTTTTTCCCACTCGGCTTTCACGTTTGGG ATTGAGAGCCACATCAGCCAGTCCAACATCAATGGGACGCTAGTGCCACCGGCCGCCCTC ATCTCCATTCTCCAGAAGGGCCTGCAGTATGTAGAGGCCGAGATCAGTATCAACGAGGAT GGCACAGTGTTCGACGGCCGCCCCATAGAGTCCCTGTCACTGATAGACGCCGTGATGCCC GACGTGGTGCAGACGCGGCAGCAGGCATTCCGAGAGAAGCTCGCTCAGCAGCAAGCCAGT GCGGCGGCGGCGGCGGCTGCGGCCACGGCAGCAGCGACAGCAGCCACCACGACCTCAGCC GGCGTTTCCCACCAAAATCCATCGAAGAACAGAGAGGCCACGGTGAATGGGGAAGAGAAC AGAGCACATTCAGTCAATAATCACGCGAAGCCAATGGAAATAGATGGAGAGGTTGAGATT CCATCCAGCAAAGCCACAGTCCTTCGGGGCCATGAGTCTGAGGTGTTCATTTGTGCCTGG AATCCTGTCAGTGATTTGCTAGCCTCCGGATCTGGAGACTCAACTGCAAGGATATGGAAC CTGAATGAGAATAGCAACGGGGGCTCCACCCAGCTCGTGTTGAGGCACTGTATACGAGAG GGGGGCCATGACGTCCCGAGTAACAAAGACGTCACCTCACTGGACTGGAATACCAATGGA ACACTCTTGGCTACGGGTTCATATGACGGTTTTGCAAGAATATGGACGGAAGATGGTAAC CTGGCCAGCACCTTAGGCCAACATAAAGGCCCCATCTTTGCCTTGAAATGGAACCGAAAG GGGAATTACATTTTGAGTGCTGGTGTAGACAAAACAACAATAATTTGGGATGCCCACACA GGAGAAGCCAAACAGCAGTTTCCTTTTCATTCAGCCCCTGCCCTTGATGTGGACTGGCAG AACAACACGACCTTTGCCTCCTGTAGCACAGACATGTGTATCCATGTGTGCAGGCTCGGC TGTGACCGCCCAGTCAAAACCTTCCAGGGACACACAAACGAGGTCAACGCCATCAAATGG GATCCGTCTGGAATGTTGCTGGCATCCTGCTCGGATGACATGACATTGAAGATCTGGAGC ATGAAACAGGAGGTGTGCATCCATGATCTTCAGGCTCACAATAAAGAGATCTACACCATC AAGTGGAGCCCCACTGGGCCCGCCACCAGCAACCCAAACTCCAACATCATGTTGGCAAGT GCTTCGTTTGATTCTACGGTGCGACTGTGGGACATAGAACGAGGCGTCTGCACCCACACG CTCACGAAGCATCAGGAGCCTGTCTATAGCGTAGCTTTCAGCCCTGATGGGAAGTACTTG GCCAGTGGATCCTTCGACAAGTGCGTCCATATCTGGAATACTCAGAGTGGAAATCTTGTC CACAGCTACCGAGGCACTGGCGGCATCTTCGAGGTGTGCTGGAACGCCCGAGGAGACAAA GTGGGTGCCAGCGCGTCCGACGGCTCTGTGTGTGTTTTGGATCTGCGGAAG
Cloned ORF protein sequence for pF1KB6101 Download>KIBB6101 577 aa MTELAGASSSCCHRPAGRGAMQSVLHHFQRLRGREGGSHFINTSSPRGEAKMSITSDEVN FLVYRYLQESGFSHSAFTFGIESHISQSNINGTLVPPAALISILQKGLQYVEAEISINED GTVFDGRPIESLSLIDAVMPDVVQTRQQAFREKLAQQQASAAAAAAAATAAATAATTTSA GVSHQNPSKNREATVNGEENRAHSVNNHAKPMEIDGEVEIPSSKATVLRGHESEVFICAW NPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVPSNKDVTSLDWNTNG TLLATGSYDGFARIWTEDGNLASTLGQHKGPIFALKWNRKGNYILSAGVDKTTIIWDAHT GEAKQQFPFHSAPALDVDWQNNTTFASCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKW DPSGMLLASCSDDMTLKIWSMKQEVCIHDLQAHNKEIYTIKWSPTGPATSNPNSNIMLAS ASFDSTVRLWDIERGVCTHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGNLV HSYRGTGGIFEVCWNARGDKVGASASDGSVCVLDLRK
Nucleotide Sequence (with vector) for pF1KB6101 Download>pF1KB6101 4844 bp GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGACCGAGCTC GCTGGCGCCTCTTCATCGTGCTGCCACCGCCCTGCAGGAAGAGGGGCCATGCAGTCAGTC TTGCACCACTTTCAACGTTTGCGAGGGAGAGAGGGTGGTTCCCACTTCATCAACACCTCA TCGCCGCGAGGTGAGGCTAAGATGAGCATAACCAGTGACGAGGTGAACTTTCTGGTGTAT CGGTATCTCCAGGAGTCAGGTTTTTCCCACTCGGCTTTCACGTTTGGGATTGAGAGCCAC ATCAGCCAGTCCAACATCAATGGGACGCTAGTGCCACCGGCCGCCCTCATCTCCATTCTC CAGAAGGGCCTGCAGTATGTAGAGGCCGAGATCAGTATCAACGAGGATGGCACAGTGTTC GACGGCCGCCCCATAGAGTCCCTGTCACTGATAGACGCCGTGATGCCCGACGTGGTGCAG ACGCGGCAGCAGGCATTCCGAGAGAAGCTCGCTCAGCAGCAAGCCAGTGCGGCGGCGGCG GCGGCTGCGGCCACGGCAGCAGCGACAGCAGCCACCACGACCTCAGCCGGCGTTTCCCAC CAAAATCCATCGAAGAACAGAGAGGCCACGGTGAATGGGGAAGAGAACAGAGCACATTCA GTCAATAATCACGCGAAGCCAATGGAAATAGATGGAGAGGTTGAGATTCCATCCAGCAAA GCCACAGTCCTTCGGGGCCATGAGTCTGAGGTGTTCATTTGTGCCTGGAATCCTGTCAGT GATTTGCTAGCCTCCGGATCTGGAGACTCAACTGCAAGGATATGGAACCTGAATGAGAAT AGCAACGGGGGCTCCACCCAGCTCGTGTTGAGGCACTGTATACGAGAGGGGGGCCATGAC GTCCCGAGTAACAAAGACGTCACCTCACTGGACTGGAATACCAATGGAACACTCTTGGCT ACGGGTTCATATGACGGTTTTGCAAGAATATGGACGGAAGATGGTAACCTGGCCAGCACC TTAGGCCAACATAAAGGCCCCATCTTTGCCTTGAAATGGAACCGAAAGGGGAATTACATT TTGAGTGCTGGTGTAGACAAAACAACAATAATTTGGGATGCCCACACAGGAGAAGCCAAA CAGCAGTTTCCTTTTCATTCAGCCCCTGCCCTTGATGTGGACTGGCAGAACAACACGACC TTTGCCTCCTGTAGCACAGACATGTGTATCCATGTGTGCAGGCTCGGCTGTGACCGCCCA GTCAAAACCTTCCAGGGACACACAAACGAGGTCAACGCCATCAAATGGGATCCGTCTGGA ATGTTGCTGGCATCCTGCTCGGATGACATGACATTGAAGATCTGGAGCATGAAACAGGAG GTGTGCATCCATGATCTTCAGGCTCACAATAAAGAGATCTACACCATCAAGTGGAGCCCC ACTGGGCCCGCCACCAGCAACCCAAACTCCAACATCATGTTGGCAAGTGCTTCGTTTGAT TCTACGGTGCGACTGTGGGACATAGAACGAGGCGTCTGCACCCACACGCTCACGAAGCAT CAGGAGCCTGTCTATAGCGTAGCTTTCAGCCCTGATGGGAAGTACTTGGCCAGTGGATCC TTCGACAAGTGCGTCCATATCTGGAATACTCAGAGTGGAAATCTTGTCCACAGCTACCGA GGCACTGGCGGCATCTTCGAGGTGTGCTGGAACGCCCGAGGAGACAAAGTGGGTGCCAGC GCGTCCGACGGCTCTGTGTGTGTTTTGGATCTGCGGAAGGTTTAAACGAATTCGAGCTCG GTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAA AGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCT TGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGGTTC GCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGCTAC CTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCAT CCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCC CTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCC TCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGGATC TGATGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGGTCGTTTCGCATGCTT GAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGCTAT GACTGGGCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAG GGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAGGAC GAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTCGAC GTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGATCTC CTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCAATGCGGCGG CTGCATACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCGAAACATCGCATCGAG CGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAGCAT CAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGTGAG GATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATGGTGGAAAATGGCCGC TTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATAGCG TTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTCGTG CTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGACGAG TTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCAACCGGTATC AGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAA CATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTT TTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTG GCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCG CTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAG CGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTC CAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAA CTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGG TAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCC TAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTAC CTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGG TTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTT GATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGT CATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAAC GCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGA TTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAAT TTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCT GCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCC ACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTC CGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGG TCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCC GAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGT AGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTT TTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATT TGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCA GGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTC TTTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCAT
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