SOX14 ORF clone FXC03220

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Flexi ORF Clone FXC03220

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Clone info.

Species

human

Clone Name

pF1KB9651 Sequence (with vector) Restriction Map

Product ID

FXC03220

HaloTag Clone PID

FHC03220

ORF Sequence

DNA sequence (720 bp)
Protein sequence (240 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB464714]

Gene

KIBB9651

Symbol

SOX14

Alias : SOX28

Description

SRY (sex determining region Y)-box 14

Original Clone ID

cp00234

Features of the cloned ORF sequence

Description

Length: 720 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 240 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS3094.1 1.9e-78 100.0 SOX14 CCDS9473.1 4e-28 58.0 SOX21 CCDS3239.1 7e-25 49.1 SOX2 CCDS9523.1 7.4e-25 46.5 SOX1 CCDS14669.1 2e-22 45.6 SOX3 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR000910 8 76 PF00505 High mobility group IPR022097 77 95 PF12336 Transcription factor SOX HMMSmart IPR000910 7 77 SM00398 High mobility group ProfileScan IPR000910 8 76 PS50118 High mobility group
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_004180 240 604747 100.0 100.0 NP_009015 276 604974 58.0 98.3 NP_003097 317 184429,189960,206900 49.1 87.9 NP_005977 391 602148 46.5 97.5 NP_005625 446 300123,312000,313430 45.6 87.5 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB9651 Download

>KIBB9651  720 bp
ATGTCCAAACCTTCAGACCACATCAAGCGGCCCATGAACGCCTTCATGGTATGGTCCCGG
GGCCAGCGGCGCAAGATGGCCCAGGAAAACCCCAAGATGCACAACTCGGAGATCAGCAAA
CGCCTAGGTGCCGAATGGAAGCTTCTGTCCGAGGCAGAGAAGCGGCCATACATCGATGAA
GCCAAGCGGCTACGCGCCCAGCACATGAAGGAGCACCCTGACTACAAGTACCGACCTCGG
CGCAAGCCCAAGAACCTGCTCAAGAAGGACAGGTATGTCTTCCCCTTGCCCTACCTGGGC
GACACGGACCCGCTCAAGGCGGCTGGCCTGCCCGTGGGGGCCTCCGACGGCCTCCTGAGC
GCGCCCGAGAAAGCCCGGGCCTTCTTGCCGCCGGCCTCGGCGCCCTACTCCCTGCTGGAC
CCCGCGCAGTTTAGCTCGAGCGCCATCCAGAAGATGGGCGAAGTGCCCCACACCTTGGCT
ACCGGCGCTCTGCCCTACGCGTCCACCCTGGGCTACCAGAACGGCGCCTTCGGCAGCCTC
AGCTGCCCCAGCCAGCACACGCACACGCACCCGTCCCCCACCAACCCTGGCTACGTGGTG
CCCTGTAACTGTACCGCCTGGTCTGCCTCCACCCTGCAGCCCCCCGTCGCCTACATCCTC
TTCCCAGGCATGACCAAGACTGGCATAGACCCTTATTCGTCAGCCCACGCTACGGCCATG

ORF Protein

Cloned ORF protein sequence for pF1KB9651 Download

>KIBB9651  240 aa
MSKPSDHIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPYIDE
AKRLRAQHMKEHPDYKYRPRRKPKNLLKKDRYVFPLPYLGDTDPLKAAGLPVGASDGLLS
APEKARAFLPPASAPYSLLDPAQFSSSAIQKMGEVPHTLATGALPYASTLGYQNGAFGSL
SCPSQHTHTHPSPTNPGYVVPCNCTAWSASTLQPPVAYILFPGMTKTGIDPYSSAHATAM

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB9651 Download

>pF1KB9651  3833 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGTCCAAACCT
TCAGACCACATCAAGCGGCCCATGAACGCCTTCATGGTATGGTCCCGGGGCCAGCGGCGC
AAGATGGCCCAGGAAAACCCCAAGATGCACAACTCGGAGATCAGCAAACGCCTAGGTGCC
GAATGGAAGCTTCTGTCCGAGGCAGAGAAGCGGCCATACATCGATGAAGCCAAGCGGCTA
CGCGCCCAGCACATGAAGGAGCACCCTGACTACAAGTACCGACCTCGGCGCAAGCCCAAG
AACCTGCTCAAGAAGGACAGGTATGTCTTCCCCTTGCCCTACCTGGGCGACACGGACCCG
CTCAAGGCGGCTGGCCTGCCCGTGGGGGCCTCCGACGGCCTCCTGAGCGCGCCCGAGAAA
GCCCGGGCCTTCTTGCCGCCGGCCTCGGCGCCCTACTCCCTGCTGGACCCCGCGCAGTTT
AGCTCGAGCGCCATCCAGAAGATGGGCGAAGTGCCCCACACCTTGGCTACCGGCGCTCTG
CCCTACGCGTCCACCCTGGGCTACCAGAACGGCGCCTTCGGCAGCCTCAGCTGCCCCAGC
CAGCACACGCACACGCACCCGTCCCCCACCAACCCTGGCTACGTGGTGCCCTGTAACTGT
ACCGCCTGGTCTGCCTCCACCCTGCAGCCCCCCGTCGCCTACATCCTCTTCCCAGGCATG
ACCAAGACTGGCATAGACCCTTATTCGTCAGCCCACGCTACGGCCATGGTTTAAACGAAT
TCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGC
TGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGC
ATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTAT
ATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACT
GCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCT
GACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCT
TTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCT
GGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCG
CCAAGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGGTCGTTT
CGCATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTA
TTCGGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTG
TCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAA
CTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCT
GTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGG
CAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCA
ATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCGAAACAT
CGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGAC
GAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCG
GATGGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATGGTGGAA
AATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAG
GACATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGC
TTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTT
CTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCA
ACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGC
AGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTT
GCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAG
TCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTC
CCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCC
TTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGT
CGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTT
ATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGC
AGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAA
GTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAA
GCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGG
TAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGA
AGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGG
GATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAA
TACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGC
TTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATAC
GGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTAC
CTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTAT
GGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCA
CGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAATCAGAACG
CAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGA
CCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCA
TGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGG
CCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGG
GAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCAT
AAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTC
TACAAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCAT