HOXB5 ORF clone FXC03099

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Flexi ORF Clone FXC03099

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Clone info.

Species

human

Clone Name

pF1KB8922 Sequence (with vector) Restriction Map

Product ID

FXC03099

HaloTag Clone PID

FHC03099

ORF Sequence

DNA sequence (807 bp)
Protein sequence (269 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB464575]

Gene

KIBB8922

Symbol

HOXB5

Alias : HHO.C10, HOX2, HOX2A, HU-1, Hox2.1

Description

homeobox B5

Original Clone ID

cp00957

Features of the cloned ORF sequence

Description

Length: 807 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 269 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS11530.1 1.6e-64 100.0 HOXB5 CCDS5406.1 3e-36 62.3 HOXA5 CCDS8872.1 2.5e-15 43.0 HOXC5 CCDS8873.1 3.4e-14 46.2 HOXC4 CCDS5405.1 4e-14 35.6 HOXA4 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR017995 175 182 PR00025 Homeobox protein IPR017995 195 210 PR00025 Homeobox protein IPR020479 216 227 PR00024 Homeobox IPR020479 231 241 PR00024 Homeobox IPR020479 241 250 PR00024 Homeobox HMMPfam IPR001356 195 251 PF00046 Homeobox HMMSmart IPR001356 194 256 SM00389 Homeobox ProfileScan IPR001356 192 252 PS50071 Homeobox
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_002138 269 142960 100.0 100.0 NP_061975 270 142952 62.3 100.0 NP_061826 222 142973 43.0 95.5 NP_002132 320 142953 35.6 98.9 XP_005257341 224 142961 40.0 97.8 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB8922 Download

>KIBB8922  807 bp
ATGAGCTCGTACTTTGTAAACTCCTTCTCGGGGCGTTATCCAAATGGCCCGGACTATCAG
TTGCTAAATTATGGCAGTGGCAGCTCTCTGAGCGGCTCTTACAGGGATCCCGCTGCCATG
CACACCGGCTCTTACGGCTACAATTACAATGGGATGGACCTCAGCGTCAACCGCTCCTCG
GCCTCCTCCAGCCACTTTGGGGCGGTGGGCGAGAGCTCGCGCGCCTTCCCCGCGCCCGCC
CAGGAGCCCCGCTTCAGGCAAGCGGCTTCGAGCTGCTCCCTGTCCTCGCCCGAGTCCCTG
CCCTGCACCAACGGCGACAGCCACGGCGCCAAGCCCTCTGCTTCGTCCCCCTCCGACCAG
GCGACCTCAGCCAGCTCCAGCGCCAATTTCACCGAAATAGACGAGGCCAGCGCGTCCTCG
GAGCCTGAGGAAGCGGCAAGCCAGCTAAGCAGCCCCAGCCTAGCTCGGGCGCAGCCAGAG
CCCATGGCCACCTCCACAGCCGCGCCCGAGGGGCAGACTCCGCAGATATTCCCCTGGATG
AGGAAGCTTCACATCAGCCATGATATGACCGGGCCGGACGGGAAAAGGGCCCGGACCGCG
TATACCCGCTACCAGACCCTGGAGCTGGAAAAGGAGTTCCACTTCAACCGCTACCTGACC
CGGCGACGGCGCATCGAGATCGCCCACGCACTCTGCCTGTCCGAGCGCCAGATCAAGATC
TGGTTCCAGAACCGGCGCATGAAGTGGAAGAAGGACAACAAATTGAAAAGTATGAGCCTG
GCTACAGCTGGCAGCGCCTTCCAGCCC

ORF Protein

Cloned ORF protein sequence for pF1KB8922 Download

>KIBB8922  269 aa
MSSYFVNSFSGRYPNGPDYQLLNYGSGSSLSGSYRDPAAMHTGSYGYNYNGMDLSVNRSS
ASSSHFGAVGESSRAFPAPAQEPRFRQAASSCSLSSPESLPCTNGDSHGAKPSASSPSDQ
ATSASSSANFTEIDEASASSEPEEAASQLSSPSLARAQPEPMATSTAAPEGQTPQIFPWM
RKLHISHDMTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKI
WFQNRRMKWKKDNKLKSMSLATAGSAFQP

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB8922 Download

>pF1KB8922  3920 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGAGCTCGTAC
TTTGTAAACTCCTTCTCGGGGCGTTATCCAAATGGCCCGGACTATCAGTTGCTAAATTAT
GGCAGTGGCAGCTCTCTGAGCGGCTCTTACAGGGATCCCGCTGCCATGCACACCGGCTCT
TACGGCTACAATTACAATGGGATGGACCTCAGCGTCAACCGCTCCTCGGCCTCCTCCAGC
CACTTTGGGGCGGTGGGCGAGAGCTCGCGCGCCTTCCCCGCGCCCGCCCAGGAGCCCCGC
TTCAGGCAAGCGGCTTCGAGCTGCTCCCTGTCCTCGCCCGAGTCCCTGCCCTGCACCAAC
GGCGACAGCCACGGCGCCAAGCCCTCTGCTTCGTCCCCCTCCGACCAGGCGACCTCAGCC
AGCTCCAGCGCCAATTTCACCGAAATAGACGAGGCCAGCGCGTCCTCGGAGCCTGAGGAA
GCGGCAAGCCAGCTAAGCAGCCCCAGCCTAGCTCGGGCGCAGCCAGAGCCCATGGCCACC
TCCACAGCCGCGCCCGAGGGGCAGACTCCGCAGATATTCCCCTGGATGAGGAAGCTTCAC
ATCAGCCATGATATGACCGGGCCGGACGGGAAAAGGGCCCGGACCGCGTATACCCGCTAC
CAGACCCTGGAGCTGGAAAAGGAGTTCCACTTCAACCGCTACCTGACCCGGCGACGGCGC
ATCGAGATCGCCCACGCACTCTGCCTGTCCGAGCGCCAGATCAAGATCTGGTTCCAGAAC
CGGCGCATGAAGTGGAAGAAGGACAACAAATTGAAAAGTATGAGCCTGGCTACAGCTGGC
AGCGCCTTCCAGCCCGTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCG
ACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGC
TGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAG
GGGTTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCA
GTCTAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTT
TTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGG
ACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCA
GCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGC
AAAGTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCT
GATCAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAACAAGATGGATTGCACGCAGGT
TCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAACAGACAATCGGC
TGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAG
ACCGACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTG
GCCACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGAC
TGGCTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCC
GAGAAAGTATCCATCATGGCTGATGCAATGCGGCGGCTGCATACGCTTGATCCGGCTACC
TGCCCATTCGACCACCAAGCGAAACATCGCATCGAGCGAGCACGCACTCGGATGGAAGCC
GGTCTTGTCGATCAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTG
TTCGCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACTCATGGCGAT
GCCTGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGC
CGGCTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTGGCTACCCGTGATATTGCTGAA
GAGCTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGAT
TCGCAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGT
TCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACG
GTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAA
GGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGA
CGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAG
ATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCT
TACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACG
CTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACC
CCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGT
AAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTA
TGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGAC
AGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTC
TTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGAT
TACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGC
TCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTT
CACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGG
GATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGT
ACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTT
TTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTT
TAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCA
TCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTT
CAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGG
CGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAG
CGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAA
AACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACG
CTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCG
GAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCA
TCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTTTTCTAAATACAT
TCAAATATGTATCCGCTCAT