UBAP1 ORF clone FXC02938

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Flexi ORF Clone FXC02938

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Clone info.

Species

human

Clone Name

pF1KB8688 Sequence (with vector) Restriction Map

Product ID

FXC02938

HaloTag Clone PID

FHC02938

ORF Sequence

DNA sequence (1506 bp)
Protein sequence (502 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1KOF Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB463329]

Gene

KIBB8688

Symbol

UBAP1

Alias : NAG20, SPG80, UAP, UBAP, UBAP-1

Description

ubiquitin associated protein 1, transcript variant 1

Original Clone ID

oc00351

Features of the cloned ORF sequence

Description

Length: 1506 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 502 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS6550.1 1.6e-165 100.0 UBAP1 CCDS55303.1 1.1e-161 100.0 UBAP1 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition ProfileScan IPR023340 17 63 PS51497 UMA domain IPR015940 389 430 PS50030 Ubiquitin-associated/translation elongation factor EF1B IPR015940 451 498 PS50030 Ubiquitin-associated/translation elongation factor EF1B
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_001164675 502 609787 100.0 100.0 NP_001164674 502 609787 100.0 100.0 XP_006716842 502 609787 100.0 100.0 XP_011516201 502 609787 100.0 100.0 XP_016870290 502 609787 100.0 100.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB8688 Download

>KIBB8688  1506 bp
ATGGCTTCTAAGAAGTTGGGTGCAGATTTTCATGGGACTTTCAGTTACCTTGATGATGTC
CCATTTAAGACAGGAGACAAATTCAAAACACCAGCTAAAGTTGGTCTACCTATTGGCTTC
TCCTTGCCTGATTGTTTGCAGGTTGTCAGAGAAGTACAGTATGACTTCTCTTTGGAAAAG
AAAACCATTGAGTGGGCTGAAGAGATTAAGAAAATCGAAGAAGCCGAGCGGGAAGCAGAG
TGCAAAATTGCGGAAGCAGAAGCTAAAGTGAATTCTAAGAGTGGCCCAGAGGGCGATAGC
AAAATGAGCTTCTCCAAGACTCACAGTACAGCCACAATGCCACCTCCTATTAACCCCATC
CTCGCCAGCTTGCAGCACAACAGCATCCTCACACCAACTCGGGTCAGCAGTAGTGCCACG
AAACAGAAAGTTCTCAGCCCACCTCACATAAAGGCGGATTTCAATCTTGCTGACTTTGAG
TGTGAAGAAGACCCATTTGATAATCTGGAGTTAAAAACTATTGATGAGAAGGAAGAGCTG
AGAAATATTCTGGTAGGAACCACTGGACCCATTATGGCTCAGTTATTGGACAATAACTTG
CCCAGGGGAGGCTCTGGGTCTGTGTTACAGGATGAGGAGGTCCTGGCATCCTTGGAACGG
GCAACCCTAGATTTCAAGCCTCTTCATAAACCCAATGGCTTTATAACCTTACCACAGTTG
GGCAACTGTGAAAAGATGTCACTGTCTTCCAAAGTGTCCCTCCCCCCTATACCTGCAGTA
AGCAATATCAAATCCCTGTCTTTCCCCAAACTTGACTCTGATGACAGCAATCAGAAGACA
GCCAAGCTGGCGAGCACTTTCCATAGCACATCCTGCCTCCGCAATGGCACGTTCCAGAAT
TCCCTAAAGCCTTCCACCCAAAGCAGTGCCAGTGAGCTCAATGGGCATCACACTCTTGGG
CTTTCAGCTTTGAACTTGGACAGTGGCACAGAGATGCCAGCCCTGACATCCTCCCAGATG
CCTTCCCTCTCTGTTTTGTCTGTGTGCACAGAGGAATCATCACCTCCAAATACTGGTCCC
ACGGTCACCCCTCCTAATTTCTCAGTGTCACAAGTGCCCAACATGCCCAGCTGTCCCCAG
GCCTATTCTGAACTGCAGATGCTGTCCCCCAGCGAGCGGCAGTGTGTGGAGACGGTGGTC
AACATGGGCTACTCGTACGAGTGTGTCCTCAGAGCCATGAAGAAGAAAGGAGAGAATATT
GAGCAGATTCTCGACTATCTCTTTGCACATGGACAGCTTTGTGAGAAGGGCTTCGACCCT
CTTTTAGTGGAAGAGGCTCTGGAAATGCACCAGTGTTCAGAAGAAAAGATGATGGAGTTT
CTTCAGTTAATGAGCAAATTTAAGGAGATGGGCTTTGAGCTGAAAGACATTAAGGAAGTT
TTGCTATTACACAACAATGACCAGGACAATGCTTTGGAAGACCTCATGGCTCGGGCAGGA
GCCAGC

ORF Protein

Cloned ORF protein sequence for pF1KB8688 Download

>KIBB8688  502 aa
MASKKLGADFHGTFSYLDDVPFKTGDKFKTPAKVGLPIGFSLPDCLQVVREVQYDFSLEK
KTIEWAEEIKKIEEAEREAECKIAEAEAKVNSKSGPEGDSKMSFSKTHSTATMPPPINPI
LASLQHNSILTPTRVSSSATKQKVLSPPHIKADFNLADFECEEDPFDNLELKTIDEKEEL
RNILVGTTGPIMAQLLDNNLPRGGSGSVLQDEEVLASLERATLDFKPLHKPNGFITLPQL
GNCEKMSLSSKVSLPPIPAVSNIKSLSFPKLDSDDSNQKTAKLASTFHSTSCLRNGTFQN
SLKPSTQSSASELNGHHTLGLSALNLDSGTEMPALTSSQMPSLSVLSVCTEESSPPNTGP
TVTPPNFSVSQVPNMPSCPQAYSELQMLSPSERQCVETVVNMGYSYECVLRAMKKKGENI
EQILDYLFAHGQLCEKGFDPLLVEEALEMHQCSEEKMMEFLQLMSKFKEMGFELKDIKEV
LLLHNNDQDNALEDLMARAGAS

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB8688 Download

>pF1KB8688  4619 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGGCTTCTAAG
AAGTTGGGTGCAGATTTTCATGGGACTTTCAGTTACCTTGATGATGTCCCATTTAAGACA
GGAGACAAATTCAAAACACCAGCTAAAGTTGGTCTACCTATTGGCTTCTCCTTGCCTGAT
TGTTTGCAGGTTGTCAGAGAAGTACAGTATGACTTCTCTTTGGAAAAGAAAACCATTGAG
TGGGCTGAAGAGATTAAGAAAATCGAAGAAGCCGAGCGGGAAGCAGAGTGCAAAATTGCG
GAAGCAGAAGCTAAAGTGAATTCTAAGAGTGGCCCAGAGGGCGATAGCAAAATGAGCTTC
TCCAAGACTCACAGTACAGCCACAATGCCACCTCCTATTAACCCCATCCTCGCCAGCTTG
CAGCACAACAGCATCCTCACACCAACTCGGGTCAGCAGTAGTGCCACGAAACAGAAAGTT
CTCAGCCCACCTCACATAAAGGCGGATTTCAATCTTGCTGACTTTGAGTGTGAAGAAGAC
CCATTTGATAATCTGGAGTTAAAAACTATTGATGAGAAGGAAGAGCTGAGAAATATTCTG
GTAGGAACCACTGGACCCATTATGGCTCAGTTATTGGACAATAACTTGCCCAGGGGAGGC
TCTGGGTCTGTGTTACAGGATGAGGAGGTCCTGGCATCCTTGGAACGGGCAACCCTAGAT
TTCAAGCCTCTTCATAAACCCAATGGCTTTATAACCTTACCACAGTTGGGCAACTGTGAA
AAGATGTCACTGTCTTCCAAAGTGTCCCTCCCCCCTATACCTGCAGTAAGCAATATCAAA
TCCCTGTCTTTCCCCAAACTTGACTCTGATGACAGCAATCAGAAGACAGCCAAGCTGGCG
AGCACTTTCCATAGCACATCCTGCCTCCGCAATGGCACGTTCCAGAATTCCCTAAAGCCT
TCCACCCAAAGCAGTGCCAGTGAGCTCAATGGGCATCACACTCTTGGGCTTTCAGCTTTG
AACTTGGACAGTGGCACAGAGATGCCAGCCCTGACATCCTCCCAGATGCCTTCCCTCTCT
GTTTTGTCTGTGTGCACAGAGGAATCATCACCTCCAAATACTGGTCCCACGGTCACCCCT
CCTAATTTCTCAGTGTCACAAGTGCCCAACATGCCCAGCTGTCCCCAGGCCTATTCTGAA
CTGCAGATGCTGTCCCCCAGCGAGCGGCAGTGTGTGGAGACGGTGGTCAACATGGGCTAC
TCGTACGAGTGTGTCCTCAGAGCCATGAAGAAGAAAGGAGAGAATATTGAGCAGATTCTC
GACTATCTCTTTGCACATGGACAGCTTTGTGAGAAGGGCTTCGACCCTCTTTTAGTGGAA
GAGGCTCTGGAAATGCACCAGTGTTCAGAAGAAAAGATGATGGAGTTTCTTCAGTTAATG
AGCAAATTTAAGGAGATGGGCTTTGAGCTGAAAGACATTAAGGAAGTTTTGCTATTACAC
AACAATGACCAGGACAATGCTTTGGAAGACCTCATGGCTCGGGCAGGAGCCAGCGTTTAA
ACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGA
TCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATA
ACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGG
AACTATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAG
CCCACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCA
GTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCG
CTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTG
CCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTC
TTGCCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGG
TCGTTTCGCATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAG
AGGCTATTCGGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTC
CGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTG
AATGAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGC
GCAGCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTG
CCGGGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCT
GATGCAATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCG
AAACATCGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGAT
CTGGACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGT
ATGCCGGATGGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATG
GTGGAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGC
TATCAGGACATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCT
GACCGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTAT
CGCCTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGA
CGCCCAACCGGACTATAAAAGGATCTAGGTGAAGATCCTTTTTGATAATCTCATGACCAA
AATCCCTTAACGTGAGTTTTCGTTCCACTGAGCGTCAGACCCCGTAGAAAAGATCAAAGG
ATCTTCTTGAAATCCTTTTTTTCTGCGCGTAATCTGCTGCTTGCAAACAAAAAAACCACC
GCTACCAGCGGTGGTTTGTTTGCCGGATCAAGAGCTACCAACTCTTTTTCCGAAGGTAAC
TGGCTTCAGCAGAGCGCAGATACCAAATACTGTCCTTCTAGTGTAGCCGTAGTTAGGCCA
CCACTTCAAGAACTCTGTAGCACCGCCTACATACCTCGCTCTGCTAATCCTGTTACCAGT
GGCTGCTGCCAGTGGCGATAAGTCGTGTCTTACCGGGTTGGACTCAAGACGATAGTTACC
GGATAAGGCGCAGCGGTCGGGCTGAACGGGGGGTTCGTGCACACAGCCCAGCTTGGAGCG
AACGACCTACACCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCC
CGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCAC
GAGGGAGCTTCCAGGGGGAAACGCCTGGTATCTTTATAGTCCTGTCGGGTTTCGCCACCT
CTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGC
CAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTTCTT
TCCTGCGTTATCCCCTGATTCTGTGGATAACCGTATTACCGCCTTTGAGTGAGCTGATAC
CGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAAT
GGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTAT
TCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCAT
TTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGG
GATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTC
CGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAATC
AGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCC
ACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTC
TCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAG
ACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATC
CGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCC
CGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTG
CGTTTCTACAAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCAT