SOX6 ORF clone FXC02819

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Flexi ORF Clone FXC02819

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Clone info.

Species

human

Clone Name

pF1KB8405 Sequence (with vector) Restriction Map

Product ID

FXC02819

HaloTag Clone PID

FHC02819

ORF Sequence

DNA sequence (2412 bp)
Protein sequence (804 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1KOF Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB463289]

Gene

KIBB8405

Symbol

SOX6

Alias : HSSOX6, SOXD, TOLCAS

Description

SRY (sex determining region Y)-box 6, transcript variant 1

Original Clone ID

oc00158

Features of the cloned ORF sequence

Description

Length: 2412 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 804 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS53605.1 1.9e-169 100.0 SOX6 CCDS53604.1 9.9e-169 100.0 SOX6 CCDS7821.1 8.9e-114 91.1 SOX6 CCDS44844.1 3.8e-31 59.5 SOX5 CCDS58217.1 3.8e-31 59.5 SOX5 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR000910 597 665 PF00505 High mobility group HMMSmart IPR000910 596 666 SM00398 High mobility group ProfileScan IPR000910 597 665 PS50118 High mobility group
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_059978 804 607257 100.0 100.0 NP_001139283 801 607257 100.0 99.6 NP_201583 808 607257 91.1 99.6 NP_001139291 841 607257 93.5 99.8 XP_016875382 751 604975,616803 59.4 99.6 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB8405 Download

>KIBB8405  2412 bp
ATGGGAAGAATGTCTTCCAAGCAAGCCACCTCTCCATTTGCCTGTGCAGCTGATGGAGAG
GATGCAATGACCCAGGATTTAACCTCAAGGGAAAAGGAAGAGGGCAGTGATCAACATGTG
GCCTCCCATCTGCCTCTGCACCCCATAATGCACAACAAACCTCACTCTGAGGAGCTACCA
ACACTTGTCAGTACCATTCAACAAGATGCTGACTGGGACAGCGTTCTGTCATCTCAGCAA
AGAATGGAATCAGAGAATAATAAGTTATGTTCCCTATATTCCTTCCGAAATACCTCTACC
TCACCACATAAGCCTGACGAAGGGAGTCGGGACCGTGAGATAATGACCAGTGTTACTTTT
GGAACCCCAGAGCGCCGCAAAGGGAGTCTTGCCGATGTGGTGGACACACTGAAACAGAAG
AAGCTTGAGGAAATGACTCGGACTGAACAAGAGGATTCCTCCTGCATGGAAAAACTACTT
TCAAAAGATTGGAAGGAAAAAATGGAAAGACTAAATACCAGTGAACTTCTTGGAGAAATT
AAAGGTACACCTGAGAGCCTGGCAGAAAAAGAACGGCAGCTCTCCACCATGATTACCCAG
CTGATCAGTTTACGGGAGCAGCTACTGGCAGCGCATGATGAACAGAAAAAACTGGCAGCG
TCACAAATTGAGAAACAACGGCAGCAAATGGACCTTGCTCGCCAACAGCAAGAACAGATT
GCGAGACAACAGCAGCAACTTCTGCAACAGCAGCACAAAATTAATCTCCTGCAGCAACAG
ATCCAGGTTCAGGGTCACATGCCTCCGCTCATGATCCCAATTTTTCCACATGACCAGCGG
ACTCTGGCAGCAGCTGCTGCTGCCCAACAGGGATTCCTCTTCCCCCCTGGAATAACATAC
AAACCAGGTGATAACTACCCCGTACAGTTCATTCCATCAACAATGGCAGCTGCTGCTGCT
TCTGGACTCAGCCCTTTACAGCTCCAGCAGCTCTATGCCGCTCAGCTGGCCAGCATGCAG
GTGTCACCTGGAGCAAAGATGCCATCAACTCCACAGCCACCAAACACAGCAGGGACGGTC
TCACCTACTGGGATAAAAAATGAAAAGAGAGGGACCAGCCCTGTAACTCAAGTTAAGGAT
GAAGCAGCAGCACAGCCTCTGAATCTCTCATCCCGACCCAAGACAGCAGAGCCTGTAAAG
TCCCCAACGTCTCCCACCCAGAACCTCTTCCCAGCCAGCAAAACCAGCCCTGTCAATCTG
CCAAACAAAAGCAGCATCCCTAGCCCCATTGGAGGAAGCCTGGGAAGAGGATCCTCTTTA
GGTAAATGGAAAAGTCAACACCAGGAAGAGACTTACGAATTAGATATCCTATCTAGTCTC
AACTCCCCTGCCCTTTTTGGGGATCAGGATACAGTGATGAAAGCCATTCAGGAGGCGCGG
AAGATGCGAGAGCAGATCCAGCGGGAGCAACAGCAGCAACAGCCACATGGTGTTGACGGG
AAACTGTCCTCCATAAATAATATGGGGCTGAACAGCTGCAGGAATGAAAAGGAAAGAACG
CGCTTTGAGAATTTGGGGCCCCAGTTAACGGGAAAGTCAAATGAAGATGGAAAACTGGGC
CCAGGTGTCATCGACCTTACTCGGCCAGAAGATGCAGAGGGAAGTAAAGCAATGAATGGC
TCTGCAGCTAAACTACAGCAGTATTATTGTTGGCCAACAGGAGGTGCCACTGTGGCTGAA
GCACGAGTCTACAGGGACGCCCGCGGCCGTGCCAGCAGCGAGCCACACATTAAGCGACCA
ATGAATGCATTCATGGTTTGGGCAAAGGATGAGAGGAGAAAAATCCTTCAGGCCTTCCCC
GACATGCATAACTCCAACATTAGCAAAATCTTAGGATCTCGCTGGAAATCAATGTCCAAC
CAGGAGAAGCAACCTTATTATGAAGAGCAGGCCCGGCTAAGCAAGATCCACTTAGAGAAG
TACCCAAACTATAAATACAAACCCCGACCGAAACGCACCTGCATTGTTGATGGCAAAAAG
CTTCGGATTGGGGAGTATAAGCAACTGATGAGGTCTCGGAGACAGGAGATGAGGCAGTTC
TTTACTGTGGGGCAACAGCCTCAGATTCCAATCACCACAGGAACAGGTGTTGTGTATCCT
GGTGCTATCACTATGGCAACTACCACACCATCGCCTCAGATGACATCTGACTGCTCTAGC
ACCTCGGCCAGCCCGGAGCCCAGCCTCCCGGTCATCCAGAGCACTTATGGTATGAAGACA
GATGGCGGAAGCCTAGCTGGAAATGAAATGATCAATGGAGAGGATGAAATGGAAATGTAT
GATGACTATGAAGATGACCCCAAATCAGACTATAGCAGTGAAAATGAAGCCCCGGAGGCT
GTCAGTGCCAAC

ORF Protein

Cloned ORF protein sequence for pF1KB8405 Download

>KIBB8405  804 aa
MGRMSSKQATSPFACAADGEDAMTQDLTSREKEEGSDQHVASHLPLHPIMHNKPHSEELP
TLVSTIQQDADWDSVLSSQQRMESENNKLCSLYSFRNTSTSPHKPDEGSRDREIMTSVTF
GTPERRKGSLADVVDTLKQKKLEEMTRTEQEDSSCMEKLLSKDWKEKMERLNTSELLGEI
KGTPESLAEKERQLSTMITQLISLREQLLAAHDEQKKLAASQIEKQRQQMDLARQQQEQI
ARQQQQLLQQQHKINLLQQQIQVQGHMPPLMIPIFPHDQRTLAAAAAAQQGFLFPPGITY
KPGDNYPVQFIPSTMAAAAASGLSPLQLQQLYAAQLASMQVSPGAKMPSTPQPPNTAGTV
SPTGIKNEKRGTSPVTQVKDEAAAQPLNLSSRPKTAEPVKSPTSPTQNLFPASKTSPVNL
PNKSSIPSPIGGSLGRGSSLGKWKSQHQEETYELDILSSLNSPALFGDQDTVMKAIQEAR
KMREQIQREQQQQQPHGVDGKLSSINNMGLNSCRNEKERTRFENLGPQLTGKSNEDGKLG
PGVIDLTRPEDAEGSKAMNGSAAKLQQYYCWPTGGATVAEARVYRDARGRASSEPHIKRP
MNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIHLEK
YPNYKYKPRPKRTCIVDGKKLRIGEYKQLMRSRRQEMRQFFTVGQQPQIPITTGTGVVYP
GAITMATTTPSPQMTSDCSSTSASPEPSLPVIQSTYGMKTDGGSLAGNEMINGEDEMEMY
DDYEDDPKSDYSSENEAPEAVSAN

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB8405 Download

>pF1KB8405  5525 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGGGAAGAATG
TCTTCCAAGCAAGCCACCTCTCCATTTGCCTGTGCAGCTGATGGAGAGGATGCAATGACC
CAGGATTTAACCTCAAGGGAAAAGGAAGAGGGCAGTGATCAACATGTGGCCTCCCATCTG
CCTCTGCACCCCATAATGCACAACAAACCTCACTCTGAGGAGCTACCAACACTTGTCAGT
ACCATTCAACAAGATGCTGACTGGGACAGCGTTCTGTCATCTCAGCAAAGAATGGAATCA
GAGAATAATAAGTTATGTTCCCTATATTCCTTCCGAAATACCTCTACCTCACCACATAAG
CCTGACGAAGGGAGTCGGGACCGTGAGATAATGACCAGTGTTACTTTTGGAACCCCAGAG
CGCCGCAAAGGGAGTCTTGCCGATGTGGTGGACACACTGAAACAGAAGAAGCTTGAGGAA
ATGACTCGGACTGAACAAGAGGATTCCTCCTGCATGGAAAAACTACTTTCAAAAGATTGG
AAGGAAAAAATGGAAAGACTAAATACCAGTGAACTTCTTGGAGAAATTAAAGGTACACCT
GAGAGCCTGGCAGAAAAAGAACGGCAGCTCTCCACCATGATTACCCAGCTGATCAGTTTA
CGGGAGCAGCTACTGGCAGCGCATGATGAACAGAAAAAACTGGCAGCGTCACAAATTGAG
AAACAACGGCAGCAAATGGACCTTGCTCGCCAACAGCAAGAACAGATTGCGAGACAACAG
CAGCAACTTCTGCAACAGCAGCACAAAATTAATCTCCTGCAGCAACAGATCCAGGTTCAG
GGTCACATGCCTCCGCTCATGATCCCAATTTTTCCACATGACCAGCGGACTCTGGCAGCA
GCTGCTGCTGCCCAACAGGGATTCCTCTTCCCCCCTGGAATAACATACAAACCAGGTGAT
AACTACCCCGTACAGTTCATTCCATCAACAATGGCAGCTGCTGCTGCTTCTGGACTCAGC
CCTTTACAGCTCCAGCAGCTCTATGCCGCTCAGCTGGCCAGCATGCAGGTGTCACCTGGA
GCAAAGATGCCATCAACTCCACAGCCACCAAACACAGCAGGGACGGTCTCACCTACTGGG
ATAAAAAATGAAAAGAGAGGGACCAGCCCTGTAACTCAAGTTAAGGATGAAGCAGCAGCA
CAGCCTCTGAATCTCTCATCCCGACCCAAGACAGCAGAGCCTGTAAAGTCCCCAACGTCT
CCCACCCAGAACCTCTTCCCAGCCAGCAAAACCAGCCCTGTCAATCTGCCAAACAAAAGC
AGCATCCCTAGCCCCATTGGAGGAAGCCTGGGAAGAGGATCCTCTTTAGGTAAATGGAAA
AGTCAACACCAGGAAGAGACTTACGAATTAGATATCCTATCTAGTCTCAACTCCCCTGCC
CTTTTTGGGGATCAGGATACAGTGATGAAAGCCATTCAGGAGGCGCGGAAGATGCGAGAG
CAGATCCAGCGGGAGCAACAGCAGCAACAGCCACATGGTGTTGACGGGAAACTGTCCTCC
ATAAATAATATGGGGCTGAACAGCTGCAGGAATGAAAAGGAAAGAACGCGCTTTGAGAAT
TTGGGGCCCCAGTTAACGGGAAAGTCAAATGAAGATGGAAAACTGGGCCCAGGTGTCATC
GACCTTACTCGGCCAGAAGATGCAGAGGGAAGTAAAGCAATGAATGGCTCTGCAGCTAAA
CTACAGCAGTATTATTGTTGGCCAACAGGAGGTGCCACTGTGGCTGAAGCACGAGTCTAC
AGGGACGCCCGCGGCCGTGCCAGCAGCGAGCCACACATTAAGCGACCAATGAATGCATTC
ATGGTTTGGGCAAAGGATGAGAGGAGAAAAATCCTTCAGGCCTTCCCCGACATGCATAAC
TCCAACATTAGCAAAATCTTAGGATCTCGCTGGAAATCAATGTCCAACCAGGAGAAGCAA
CCTTATTATGAAGAGCAGGCCCGGCTAAGCAAGATCCACTTAGAGAAGTACCCAAACTAT
AAATACAAACCCCGACCGAAACGCACCTGCATTGTTGATGGCAAAAAGCTTCGGATTGGG
GAGTATAAGCAACTGATGAGGTCTCGGAGACAGGAGATGAGGCAGTTCTTTACTGTGGGG
CAACAGCCTCAGATTCCAATCACCACAGGAACAGGTGTTGTGTATCCTGGTGCTATCACT
ATGGCAACTACCACACCATCGCCTCAGATGACATCTGACTGCTCTAGCACCTCGGCCAGC
CCGGAGCCCAGCCTCCCGGTCATCCAGAGCACTTATGGTATGAAGACAGATGGCGGAAGC
CTAGCTGGAAATGAAATGATCAATGGAGAGGATGAAATGGAAATGTATGATGACTATGAA
GATGACCCCAAATCAGACTATAGCAGTGAAAATGAAGCCCCGGAGGCTGTCAGTGCCAAC
GTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCA
AGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGA
GCAATAACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAA
AGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCA
TGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGAT
AGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGT
GTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAA
GAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATG
GCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGA
TGACGGTCGTTTCGCATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGG
GTGGAGAGGCTATTCGGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCCGCC
GTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGT
GCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTT
CCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGC
GAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATC
ATGGCTGATGCAATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGACCAC
CAAGCGAAACATCGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAG
GATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAG
GCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAAT
ATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCG
GACCGCTATCAGGACATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAA
TGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCC
TTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACC
AAGCGACGCCCAACCGGACTATAAAAGGATCTAGGTGAAGATCCTTTTTGATAATCTCAT
GACCAAAATCCCTTAACGTGAGTTTTCGTTCCACTGAGCGTCAGACCCCGTAGAAAAGAT
CAAAGGATCTTCTTGAAATCCTTTTTTTCTGCGCGTAATCTGCTGCTTGCAAACAAAAAA
ACCACCGCTACCAGCGGTGGTTTGTTTGCCGGATCAAGAGCTACCAACTCTTTTTCCGAA
GGTAACTGGCTTCAGCAGAGCGCAGATACCAAATACTGTCCTTCTAGTGTAGCCGTAGTT
AGGCCACCACTTCAAGAACTCTGTAGCACCGCCTACATACCTCGCTCTGCTAATCCTGTT
ACCAGTGGCTGCTGCCAGTGGCGATAAGTCGTGTCTTACCGGGTTGGACTCAAGACGATA
GTTACCGGATAAGGCGCAGCGGTCGGGCTGAACGGGGGGTTCGTGCACACAGCCCAGCTT
GGAGCGAACGACCTACACCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCAC
GCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGA
GCGCACGAGGGAGCTTCCAGGGGGAAACGCCTGGTATCTTTATAGTCCTGTCGGGTTTCG
CCACCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAA
AAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACAT
GTTCTTTCCTGCGTTATCCCCTGATTCTGTGGATAACCGTATTACCGCCTTTGAGTGAGC
TGATACCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATG
AAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCAT
AGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGT
TGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAA
TTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCA
GTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACAGAT
TAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGT
GGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGT
GGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGT
CGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGA
CAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAG
GACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCC
TTTTTGCGTTTCTACAAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTATCCG
CTCAT