STX4 ORF clone FXC02686

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Flexi ORF Clone FXC02686

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Clone info.

Species

human

Clone Name

pF1KB8238 Sequence (with vector) Restriction Map

Product ID

FXC02686

HaloTag Clone PID

FHC02686

ORF Sequence

DNA sequence (891 bp)
Protein sequence (297 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB464273]

Gene

KIBB8238

Symbol

STX4

Alias : STX4A, p35-2

Description

syntaxin 4, transcript variant 3

Original Clone ID

cp00598

Features of the cloned ORF sequence

Description

Length: 891 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 297 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS10700.1 2.7e-75 100.0 STX4 CCDS61916.1 1.5e-62 96.3 STX4 CCDS34655.1 7.4e-29 45.7 STX1A CCDS9269.1 1.3e-28 44.1 STX2 CCDS9270.1 2.5e-28 44.6 STX2 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR006011 39 137 PF00804 Syntaxin IPR000727 206 267 PF05739 Target SNARE coiled-coil domain HMMSmart IPR006011 33 153 SM00503 Syntaxin IPR000727 195 262 SM00397 Target SNARE coiled-coil domain ProfileScan IPR000727 200 262 PS50192 Target SNARE coiled-coil domain
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 274 VLIAICVSITVVLLAVIIGVTVV 296 PRIMARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_004595 297 186591 100.0 100.0 XP_005255578 293 186591 96.3 89.9 NP_001259025 295 186591 96.3 89.9 NP_004594 288 186590 45.7 98.3 NP_001971 287 132350 44.1 99.3 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB8238 Download

>KIBB8238  891 bp
ATGCGGGACAGGACCCACGAGCTGAGACAGGGGGATGACAGCTCGGACGAAGAGGACAAG
GAGCGGGTCGCGCTGGTGGTGCACCCGGGCACGGCACGGCTGGGGAGCCCGGACGAGGAG
TTCTTCCACAAGGTCCGGACAATTCGGCAGACTATTGTCAAACTGGGGAATAAAGTCCAG
GAGTTGGAGAAACAGCAGGTCACCATCCTGGCCACGCCCCTTCCCGAGGAGAGCATGAAG
CAGGAGCTGCAGAACCTGCGCGATGAGATCAAACAGCTGGGGAGGGAGATCCGCCTGCAG
CTGAAGGCCATAGAGCCCCAGAAGGAGGAAGCTGATGAGAACTATAACTCCGTCAACACA
AGAATGAGAAAAACCCAGCATGGGGTCCTGTCCCAGCAATTCGTGGAGCTCATCAACAAG
TGCAATTCAATGCAGTCCGAATACCGGGAGAAGAACGTGGAGCGGATTCGGAGGCAGCTG
AAGATCACCAATGCTGGGATGGTGTCTGATGAGGAGTTGGAGCAGATGCTGGACAGTGGG
CAAAGCGAGGTGTTTGTGTCCAATATCCTGAAGGACACGCAGGTGACTCGACAGGCCTTA
AATGAGATCTCGGCCCGGCACAGTGAGATCCAGCAGCTTGAACGCAGTATTCGTGAGCTG
CACGACATATTCACTTTTCTGGCTACCGAAGTGGAGATGCAGGGGGAGATGATCAATCGG
ATTGAGAAGAACATCCTGAGCTCAGCGGACTACGTGGAACGTGGGCAGGAGCACGTCAAG
ACGGCCCTGGAGAACCAGAAGAAGGCGAGGAAGAAGAAAGTCTTGATTGCCATCTGTGTG
TCCATCACCGTCGTCCTCCTAGCAGTCATCATTGGCGTCACAGTGGTTGGA

ORF Protein

Cloned ORF protein sequence for pF1KB8238 Download

>KIBB8238  297 aa
MRDRTHELRQGDDSSDEEDKERVALVVHPGTARLGSPDEEFFHKVRTIRQTIVKLGNKVQ
ELEKQQVTILATPLPEESMKQELQNLRDEIKQLGREIRLQLKAIEPQKEEADENYNSVNT
RMRKTQHGVLSQQFVELINKCNSMQSEYREKNVERIRRQLKITNAGMVSDEELEQMLDSG
QSEVFVSNILKDTQVTRQALNEISARHSEIQQLERSIRELHDIFTFLATEVEMQGEMINR
IEKNILSSADYVERGQEHVKTALENQKKARKKKVLIAICVSITVVLLAVIIGVTVVG

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB8238 Download

>pF1KB8238  4004 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGCGGGACAGG
ACCCACGAGCTGAGACAGGGGGATGACAGCTCGGACGAAGAGGACAAGGAGCGGGTCGCG
CTGGTGGTGCACCCGGGCACGGCACGGCTGGGGAGCCCGGACGAGGAGTTCTTCCACAAG
GTCCGGACAATTCGGCAGACTATTGTCAAACTGGGGAATAAAGTCCAGGAGTTGGAGAAA
CAGCAGGTCACCATCCTGGCCACGCCCCTTCCCGAGGAGAGCATGAAGCAGGAGCTGCAG
AACCTGCGCGATGAGATCAAACAGCTGGGGAGGGAGATCCGCCTGCAGCTGAAGGCCATA
GAGCCCCAGAAGGAGGAAGCTGATGAGAACTATAACTCCGTCAACACAAGAATGAGAAAA
ACCCAGCATGGGGTCCTGTCCCAGCAATTCGTGGAGCTCATCAACAAGTGCAATTCAATG
CAGTCCGAATACCGGGAGAAGAACGTGGAGCGGATTCGGAGGCAGCTGAAGATCACCAAT
GCTGGGATGGTGTCTGATGAGGAGTTGGAGCAGATGCTGGACAGTGGGCAAAGCGAGGTG
TTTGTGTCCAATATCCTGAAGGACACGCAGGTGACTCGACAGGCCTTAAATGAGATCTCG
GCCCGGCACAGTGAGATCCAGCAGCTTGAACGCAGTATTCGTGAGCTGCACGACATATTC
ACTTTTCTGGCTACCGAAGTGGAGATGCAGGGGGAGATGATCAATCGGATTGAGAAGAAC
ATCCTGAGCTCAGCGGACTACGTGGAACGTGGGCAGGAGCACGTCAAGACGGCCCTGGAG
AACCAGAAGAAGGCGAGGAAGAAGAAAGTCTTGATTGCCATCTGTGTGTCCATCACCGTC
GTCCTCCTAGCAGTCATCATTGGCGTCACAGTGGTTGGAGTTTAAACGAATTCGAGCTCG
GTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAA
AGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCT
TGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGGTTC
GCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGCTAC
CTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCAT
CCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCC
CTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCC
TCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGGATC
TGATGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGGTCGTTTCGCATGCTT
GAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGCTAT
GACTGGGCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAG
GGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAGGAC
GAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTCGAC
GTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGATCTC
CTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCAATGCGGCGG
CTGCATACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCGAAACATCGCATCGAG
CGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAGCAT
CAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGTGAG
GATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATGGTGGAAAATGGCCGC
TTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATAGCG
TTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTCGTG
CTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGACGAG
TTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCAACCGGTATC
AGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAA
CATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTT
TTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTG
GCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCG
CTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAG
CGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTC
CAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAA
CTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGG
TAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCC
TAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTAC
CTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGG
TTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTT
GATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGT
CATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAAC
GCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGA
TTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAAT
TTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCT
GCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCC
ACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTC
CGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGG
TCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCC
GAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGT
AGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTT
TTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATT
TGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCA
GGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTC
TTTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCAT