SOX8 ORF clone FXC02570

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Flexi ORF Clone FXC02570

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Clone info.

Species

human

Clone Name

pF1KB7755 Sequence (with vector) Restriction Map

Product ID

FXC02570

HaloTag Clone PID

FHC02570

ORF Sequence

DNA sequence (1338 bp)
Protein sequence (446 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB464249]

Gene

KIBB7755

Symbol

SOX8

Description

SRY (sex determining region Y)-box 8

Original Clone ID

cs00255

Features of the cloned ORF sequence

Description

Length: 1338 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 446 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS10428.1 4.8e-107 100.0 SOX8 CCDS11689.1 1.3e-36 48.5 SOX9 CCDS13964.1 1.3e-25 50.3 SOX10 CCDS6159.1 7.1e-12 34.6 SOX17 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR022151 7 89 PF12444 Sox developmental protein N-terminal IPR000910 102 170 PF00505 High mobility group HMMSmart IPR000910 101 171 SM00398 High mobility group ProfileScan IPR000910 102 170 PS50118 High mobility group
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_055402 446 605923 100.0 100.0 NP_000337 509 114290,608160,616425 48.5 90.6 NP_008872 466 602229,609136,611584,613266 50.3 99.8 NP_060889 384 137940,601618,607823 31.7 84.5 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB7755 Download

>KIBB7755  1338 bp
ATGCTGGACATGAGCGAGGCCCGCTCCCAGCCGCCCTGCAGCCCGTCCGGCACCGCCAGC
TCCATGTCGCACGTGGAGGACTCGGACTCGGACGCGCCGCCGTCTCCCGCCGGCTCCGAG
GGCCTGGGCCGCGCGGGGGTCGCGGTGGGGGGCGCCCGGGGCGACCCGGCGGAGGCGGCG
GACGAGCGCTTCCCGGCCTGCATCCGCGACGCCGTGTCGCAGGTGCTCAAGGGCTACGAC
TGGAGTCTGGTGCCCATGCCGGTGCGCGGCGGCGGCGGCGGCGCGCTCAAAGCCAAGCCG
CATGTGAAGCGGCCCATGAACGCATTCATGGTGTGGGCGCAGGCGGCGCGCCGCAAGCTG
GCCGACCAGTACCCGCACCTGCACAACGCCGAGCTCAGCAAGACGCTGGGCAAGCTGTGG
CGCTTGCTGAGCGAGAGCGAGAAGCGGCCCTTCGTGGAGGAGGCAGAGCGCCTTCGCGTG
CAGCACAAGAAGGACCACCCCGACTACAAGTACCAGCCACGGCGCAGGAAGAGCGCCAAA
GCCGGCCACAGCGACTCCGACTCGGGCGCGGAGCTGGGACCCCACCCTGGCGGCGGTGCC
GTGTACAAGGCTGAAGCAGGGCTTGGAGATGGGCACCACCATGGCGACCACACAGGGCAG
ACCCACGGGCCGCCCACCCCGCCCACCACCCCCAAGACGGAGCTGCAGCAGGCGGGCGCC
AAGCCGGAGCTGAAGCTGGAGGGACGCCGGCCGGTGGACAGCGGGCGCCAGAACATCGAC
TTCAGCAACGTGGACATCTCGGAGCTCAGCAGCGAGGTCATGGGCACCATGGACGCCTTC
GACGTCCACGAGTTCGACCAGTACCTGCCCCTGGGCGGCCCCGCCCCACCCGAGCCGGGC
CAGGCCTACGGGGGCGCCTACTTCCACGCCGGGGCGTCCCCCGTGTGGGCCCACAAGAGT
GCCCCGTCGGCCTCCGCGTCGCCCACCGAGACGGGTCCCCCACGGCCGCACATCAAGACG
GAGCAGCCGAGCCCCGGCCACTACGGCGACCAGCCCCGAGGCTCGCCCGACTACGGTTCC
TGCAGCGGCCAGTCCAGCGCCACCCCGGCCGCCCCCGCCGGCCCCTTCGCCGGCTCACAG
GGCGACTATGGCGACCTGCAGGCCTCCAGCTACTATGGTGCCTACCCTGGCTACGCACCC
GGCCTCTACCAGTACCCCTGCTTCCACTCGCCGCGCCGGCCCTACGCCTCACCCCTGCTC
AACGGCCTGGCCCTGCCGCCCGCCCACAGCCCCACCAGTCACTGGGACCAGCCGGTGTAC
ACCACCCTGACCAGGCCC

ORF Protein

Cloned ORF protein sequence for pF1KB7755 Download

>KIBB7755  446 aa
MLDMSEARSQPPCSPSGTASSMSHVEDSDSDAPPSPAGSEGLGRAGVAVGGARGDPAEAA
DERFPACIRDAVSQVLKGYDWSLVPMPVRGGGGGALKAKPHVKRPMNAFMVWAQAARRKL
ADQYPHLHNAELSKTLGKLWRLLSESEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSAK
AGHSDSDSGAELGPHPGGGAVYKAEAGLGDGHHHGDHTGQTHGPPTPPTTPKTELQQAGA
KPELKLEGRRPVDSGRQNIDFSNVDISELSSEVMGTMDAFDVHEFDQYLPLGGPAPPEPG
QAYGGAYFHAGASPVWAHKSAPSASASPTETGPPRPHIKTEQPSPGHYGDQPRGSPDYGS
CSGQSSATPAAPAGPFAGSQGDYGDLQASSYYGAYPGYAPGLYQYPCFHSPRRPYASPLL
NGLALPPAHSPTSHWDQPVYTTLTRP

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB7755 Download

>pF1KB7755  4451 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGCTGGACATG
AGCGAGGCCCGCTCCCAGCCGCCCTGCAGCCCGTCCGGCACCGCCAGCTCCATGTCGCAC
GTGGAGGACTCGGACTCGGACGCGCCGCCGTCTCCCGCCGGCTCCGAGGGCCTGGGCCGC
GCGGGGGTCGCGGTGGGGGGCGCCCGGGGCGACCCGGCGGAGGCGGCGGACGAGCGCTTC
CCGGCCTGCATCCGCGACGCCGTGTCGCAGGTGCTCAAGGGCTACGACTGGAGTCTGGTG
CCCATGCCGGTGCGCGGCGGCGGCGGCGGCGCGCTCAAAGCCAAGCCGCATGTGAAGCGG
CCCATGAACGCATTCATGGTGTGGGCGCAGGCGGCGCGCCGCAAGCTGGCCGACCAGTAC
CCGCACCTGCACAACGCCGAGCTCAGCAAGACGCTGGGCAAGCTGTGGCGCTTGCTGAGC
GAGAGCGAGAAGCGGCCCTTCGTGGAGGAGGCAGAGCGCCTTCGCGTGCAGCACAAGAAG
GACCACCCCGACTACAAGTACCAGCCACGGCGCAGGAAGAGCGCCAAAGCCGGCCACAGC
GACTCCGACTCGGGCGCGGAGCTGGGACCCCACCCTGGCGGCGGTGCCGTGTACAAGGCT
GAAGCAGGGCTTGGAGATGGGCACCACCATGGCGACCACACAGGGCAGACCCACGGGCCG
CCCACCCCGCCCACCACCCCCAAGACGGAGCTGCAGCAGGCGGGCGCCAAGCCGGAGCTG
AAGCTGGAGGGACGCCGGCCGGTGGACAGCGGGCGCCAGAACATCGACTTCAGCAACGTG
GACATCTCGGAGCTCAGCAGCGAGGTCATGGGCACCATGGACGCCTTCGACGTCCACGAG
TTCGACCAGTACCTGCCCCTGGGCGGCCCCGCCCCACCCGAGCCGGGCCAGGCCTACGGG
GGCGCCTACTTCCACGCCGGGGCGTCCCCCGTGTGGGCCCACAAGAGTGCCCCGTCGGCC
TCCGCGTCGCCCACCGAGACGGGTCCCCCACGGCCGCACATCAAGACGGAGCAGCCGAGC
CCCGGCCACTACGGCGACCAGCCCCGAGGCTCGCCCGACTACGGTTCCTGCAGCGGCCAG
TCCAGCGCCACCCCGGCCGCCCCCGCCGGCCCCTTCGCCGGCTCACAGGGCGACTATGGC
GACCTGCAGGCCTCCAGCTACTATGGTGCCTACCCTGGCTACGCACCCGGCCTCTACCAG
TACCCCTGCTTCCACTCGCCGCGCCGGCCCTACGCCTCACCCCTGCTCAACGGCCTGGCC
CTGCCGCCCGCCCACAGCCCCACCAGTCACTGGGACCAGCCGGTGTACACCACCCTGACC
AGGCCCGTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGG
CATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCAC
CGCTGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTT
GCTGAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTA
TCGCCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGT
CCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTT
CTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCT
TCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAAC
TGGATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAG
ACAGGATGACGGTCGTTTCGCATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCC
GCTTGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGAT
GCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTG
TCCGGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACG
GGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTA
TTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTA
TCCATCATGGCTGATGCAATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTC
GACCACCAAGCGAAACATCGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTC
GATCAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGG
CTCAAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTG
CCGAATATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGT
GTGGCGGACCGCTATCAGGACATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGC
GGCGAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGC
ATCGCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGA
CCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCAC
AGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAA
CCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCA
CAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGC
GTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATA
CCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTA
TCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCA
GCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGA
CTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGG
TGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGG
TATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGG
CAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAG
AAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAA
CGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGAT
CCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAA
ACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGG
TTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTG
GTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGC
GTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAA
ACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGAT
ACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAG
CGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGG
TAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGG
CTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGA
GTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGC
GGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGG
ATGGCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATG
TATCCGCTCAT