SARNP ORF clone FXC02523

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KOP Flexi HaloTag ORF List search

Flexi ORF Clone FXC02523

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Clone info.

Species

human

Clone Name

pF1KB7567 Sequence (with vector) Restriction Map

Product ID

FXC02523

HaloTag Clone PID

FHC02523

ORF Sequence

DNA sequence (630 bp)
Protein sequence (210 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB463939]

Gene

KIBB7567

Symbol

SARNP

Alias : CIP29, HCC1, HSPC316, THO1

Description

SAP domain containing ribonucleoprotein, transcript variant 1

Original Clone ID

cs00067

Features of the cloned ORF sequence

Description

Length: 630 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 210 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS8892.1 9.3e-58 100.0 SARNP The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR003034 8 42 PF02037 DNA-binding SAP HMMSmart IPR003034 8 42 SM00513 DNA-binding SAP ProfileScan IPR003034 8 42 PS50800 DNA-binding SAP
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_149073 210 610049 100.0 100.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB7567 Download

>KIBB7567  630 bp
ATGGCGACCGAGACGGTGGAGCTCCATAAGCTAAAGCTTGCCGAACTAAAGCAAGAATGT
CTTGCTCGTGGTTTGGAGACCAAGGGAATAAAGCAAGATCTTATCCACAGACTCCAGGCA
TATCTTGAAGAACATGCTGAAGAGGAGGCAAATGAAGAAGATGTACTGGGAGATGAAACA
GAGGAAGAAGAAACAAAGCCCATTGAGCTCCCTGTCAAAGAGGAAGAACCCCCTGAAAAA
ACTGTTGATGTGGCAGCAGAGAAGAAAGTGGTGAAAATTACATCTGAAATACCACAGACT
GAGAGAATGCAGAAGAGGGCTGAACGATTCAATGTACCTGTGAGCTTGGAGAGTAAGAAA
GCTGCTCGGGCAGCTAGGTTTGGGATTTCTTCAGTTCCAACAAAAGGTCTGTCATCTGAT
AACAAACCTATGGTTAACTTGGATAAGCTGAAGGAAAGAGCTCAAAGATTTGGTTTGAAT
GTCTCTTCAATCTCCAGAAAGTCTGAAGATGATGAGAAACTGAAAAAGAGGAAGGAGCGA
TTTGGGATTGTCACAAGTTCAGCTGGAACTGGAACCACAGAGGATACAGAGGCAAAGAAG
AGGAAAAGAGCAGAGCGCTTTGGGATTGCC

ORF Protein

Cloned ORF protein sequence for pF1KB7567 Download

>KIBB7567  210 aa
MATETVELHKLKLAELKQECLARGLETKGIKQDLIHRLQAYLEEHAEEEANEEDVLGDET
EEEETKPIELPVKEEEPPEKTVDVAAEKKVVKITSEIPQTERMQKRAERFNVPVSLESKK
AARAARFGISSVPTKGLSSDNKPMVNLDKLKERAQRFGLNVSSISRKSEDDEKLKKRKER
FGIVTSSAGTGTTEDTEAKKRKRAERFGIA

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB7567 Download

>pF1KB7567  3743 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGGCGACCGAG
ACGGTGGAGCTCCATAAGCTAAAGCTTGCCGAACTAAAGCAAGAATGTCTTGCTCGTGGT
TTGGAGACCAAGGGAATAAAGCAAGATCTTATCCACAGACTCCAGGCATATCTTGAAGAA
CATGCTGAAGAGGAGGCAAATGAAGAAGATGTACTGGGAGATGAAACAGAGGAAGAAGAA
ACAAAGCCCATTGAGCTCCCTGTCAAAGAGGAAGAACCCCCTGAAAAAACTGTTGATGTG
GCAGCAGAGAAGAAAGTGGTGAAAATTACATCTGAAATACCACAGACTGAGAGAATGCAG
AAGAGGGCTGAACGATTCAATGTACCTGTGAGCTTGGAGAGTAAGAAAGCTGCTCGGGCA
GCTAGGTTTGGGATTTCTTCAGTTCCAACAAAAGGTCTGTCATCTGATAACAAACCTATG
GTTAACTTGGATAAGCTGAAGGAAAGAGCTCAAAGATTTGGTTTGAATGTCTCTTCAATC
TCCAGAAAGTCTGAAGATGATGAGAAACTGAAAAAGAGGAAGGAGCGATTTGGGATTGTC
ACAAGTTCAGCTGGAACTGGAACCACAGAGGATACAGAGGCAAAGAAGAGGAAAAGAGCA
GAGCGCTTTGGGATTGCCGTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAG
TCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTT
GGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTT
GAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAAAACCGC
CCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGC
GTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTG
CGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCG
GCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCC
TGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGATCAAGA
TCTGATCAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAACAAGATGGATTGCACGCA
GGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAACAGACAATC
GGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTC
AAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTATCGTGG
CTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCGGGAAGG
GACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTTGCTCCT
GCCGAGAAAGTATCCATCATGGCTGATGCAATGCGGCGGCTGCATACGCTTGATCCGGCT
ACCTGCCCATTCGACCACCAAGCGAAACATCGCATCGAGCGAGCACGCACTCGGATGGAA
GCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCAGCCGAA
CTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACTCATGGC
GATGCCTGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATCGACTGT
GGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTGGCTACCCGTGATATTGCT
GAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCCGCTCCC
GATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGACTCTGG
GGTTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAAT
ACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCA
AAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCC
TGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATA
AAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCC
GCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTC
ACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGA
ACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCC
GGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAG
GTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAG
GACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAG
CTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCA
GATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGA
CGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGAT
CTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGC
TGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCC
TGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCA
GTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCG
TTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAG
CCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCT
TTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCC
TGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCG
TAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAA
TAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGA
ACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGC
CCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGG
CCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTTTTCTAAATA
CATTCAAATATGTATCCGCTCAT