CLCA3P ORF clone FXC02336

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Flexi ORF Clone FXC02336

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Clone info.

Species

human

Clone Name

pF1KB7225 Sequence (with vector) Restriction Map

Product ID

FXC02336

HaloTag Clone PID

FHC02336

ORF Sequence

DNA sequence (786 bp)
Protein sequence (262 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB463492]

Gene

KIBB7225

Symbol

CLCA3P

Alias : CLCA3

Description

chloride channel accessory 3, pseudogene

Original Clone ID

oc00441

Features of the cloned ORF sequence

Description

Length: 786 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 262 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS41355.1 7.8e-67 55.7 CLCA4 CCDS709.1 1.1e-66 54.8 CLCA1 CCDS708.1 6.2e-65 56.8 CLCA2 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR013642 1 262 PF08434 Chloride channel calcium-activated
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 3 FSLKVILFLSLLLSPVLKSSLVT 25 PRIMARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_001276 914 603906 55.2 98.9 NP_036260 919 616857 55.7 97.3 XP_011540750 616 604003 56.8 99.6 NP_006527 943 604003 56.8 99.6 XP_011539317 868 616857 56.4 80.5 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB7225 Download

>KIBB7225  786 bp
ATGGTGTTCAGTCTGAAGGTGATTCTCTTCCTATCCTTGCTTCTCTCGCCTGTATTGAAA
AGCTCACTGGTAACTTTGAATAACAATGGATATGATGGCATTGTCATTGCAATTAATCCC
AGTGTACCAGAAGATGAAAAACTCATTCAAAACATAAAGGAAATGGTAACTGAAGCATCT
ACTTACCTGTTTCATGCCACCAAACAAAGAGCTTATTTCAGGAATGTAAGCATTTTAATT
CCAATGACCTACAAATCAAAATCTGAGTACTTAATCCCAAAACAAGAATCATATGACCAG
GCAGATGTCATAGTTGCTGATCTTTACCTGAAATACGGAGATGATCCCTATACACTTCAA
TATGGACAATGTGGAGATAAAGGACAATATATACATTTTACTCCAAACTTCTTGTTGACT
AATAACTTGGCTACCTATGGGCCTCGAGGTAGAGTATTTGTCCATGAGTGGGCCCATCTC
CGGTGGGGAGTATTTGATGAGTATAATGTGGACCAGCCATTCTATATTTCCAGAAGAAAC
ACTACTGAAGCAACAAGATGTTCCACTCGTATTACTGTTTACATGGTTTTGAACGAATGC
AAGGGGGCCAGCTGTATAGCACGACCATTCAGACGTGACTCAAAGACAGGGCTGTATGAA
GCAAAATGTACATTTATCCCAAAGAGATCCCAGACTGCCAAGGAATCCATTGTGTTTATG
CAAAATCTTGATTCTGTGACTGAATTTTGTACTGAAAAAACACACAATAAAGAAGCTCCA
AACCTA

ORF Protein

Cloned ORF protein sequence for pF1KB7225 Download

>KIBB7225  262 aa
MVFSLKVILFLSLLLSPVLKSSLVTLNNNGYDGIVIAINPSVPEDEKLIQNIKEMVTEAS
TYLFHATKQRAYFRNVSILIPMTYKSKSEYLIPKQESYDQADVIVADLYLKYGDDPYTLQ
YGQCGDKGQYIHFTPNFLLTNNLATYGPRGRVFVHEWAHLRWGVFDEYNVDQPFYISRRN
TTEATRCSTRITVYMVLNECKGASCIARPFRRDSKTGLYEAKCTFIPKRSQTAKESIVFM
QNLDSVTEFCTEKTHNKEAPNL

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB7225 Download

>pF1KB7225  3899 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGGTGTTCAGT
CTGAAGGTGATTCTCTTCCTATCCTTGCTTCTCTCGCCTGTATTGAAAAGCTCACTGGTA
ACTTTGAATAACAATGGATATGATGGCATTGTCATTGCAATTAATCCCAGTGTACCAGAA
GATGAAAAACTCATTCAAAACATAAAGGAAATGGTAACTGAAGCATCTACTTACCTGTTT
CATGCCACCAAACAAAGAGCTTATTTCAGGAATGTAAGCATTTTAATTCCAATGACCTAC
AAATCAAAATCTGAGTACTTAATCCCAAAACAAGAATCATATGACCAGGCAGATGTCATA
GTTGCTGATCTTTACCTGAAATACGGAGATGATCCCTATACACTTCAATATGGACAATGT
GGAGATAAAGGACAATATATACATTTTACTCCAAACTTCTTGTTGACTAATAACTTGGCT
ACCTATGGGCCTCGAGGTAGAGTATTTGTCCATGAGTGGGCCCATCTCCGGTGGGGAGTA
TTTGATGAGTATAATGTGGACCAGCCATTCTATATTTCCAGAAGAAACACTACTGAAGCA
ACAAGATGTTCCACTCGTATTACTGTTTACATGGTTTTGAACGAATGCAAGGGGGCCAGC
TGTATAGCACGACCATTCAGACGTGACTCAAAGACAGGGCTGTATGAAGCAAAATGTACA
TTTATCCCAAAGAGATCCCAGACTGCCAAGGAATCCATTGTGTTTATGCAAAATCTTGAT
TCTGTGACTGAATTTTGTACTGAAAAAACACACAATAAAGAAGCTCCAAACCTAGTTTAA
ACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGA
TCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATA
ACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGG
AACTATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAG
CCCACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCA
GTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCG
CTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTG
CCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTC
TTGCCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGG
TCGTTTCGCATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAG
AGGCTATTCGGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTC
CGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTG
AATGAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGC
GCAGCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTG
CCGGGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCT
GATGCAATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCG
AAACATCGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGAT
CTGGACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGT
ATGCCGGATGGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATG
GTGGAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGC
TATCAGGACATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCT
GACCGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTAT
CGCCTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGA
CGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGA
TAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGC
CGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACG
CTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGG
AAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTT
TCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGT
GTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTG
CGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACT
GGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTT
CTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCT
GCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCAC
CGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATT
TCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACG
TTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTC
CGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAAT
GGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTAT
TCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCAT
TTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGG
GATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTC
CGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAATC
AGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCC
ACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTC
TCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAG
ACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATC
CGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCC
CGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTG
CGTTTCTACAAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCAT