LRIT1 ORF clone FXC02321

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Flexi ORF Clone FXC02321

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Clone info.

Species

human

Clone Name

pF1KB7203 Sequence (with vector) Restriction Map

Product ID

FXC02321

HaloTag Clone PID

FHC02321

ORF Sequence

DNA sequence (1869 bp)
Protein sequence (623 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB463829]

Gene

KIBB7203

Symbol

LRIT1

Alias : FIGLER9, LRRC21, PAL

Description

leucine-rich repeat, immunoglobulin-like and transmembrane domains 1

Original Clone ID

oc00419

Features of the cloned ORF sequence

Description

Length: 1869 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 623 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS7373.1 3.4e-186 100.0 LRIT1 CCDS3688.3 1.9e-42 35.8 LRIT3 CCDS31234.1 3.7e-25 29.1 LRIT2 CCDS60581.1 6.1e-21 29.3 LRIT2 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR001611 156 173 PF00560 Leucine-rich repeat IPR013098 267 345 PF07679 Immunoglobulin I-set IPR003961 432 499 PF00041 Fibronectin HMMSmart IPR003591 82 105 SM00369 Leucine-rich repeat IPR003591 106 129 SM00369 Leucine-rich repeat IPR003591 131 153 SM00369 Leucine-rich repeat IPR003591 154 177 SM00369 Leucine-rich repeat IPR000483 201 252 SM00082 Cysteine-rich flanking region IPR003599 260 346 SM00409 Immunoglobulin subtype IPR003598 266 335 SM00408 Immunoglobulin subtype 2 ProfileScan IPR001611 84 105 PS51450 Leucine-rich repeat IPR001611 132 153 PS51450 Leucine-rich repeat IPR001611 156 177 PS51450 Leucine-rich repeat IPR007110 254 346 PS50835 Immunoglobulin-like IPR003961 427 519 PS50853 Fibronectin
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 1 MRVALGMLWLLALAWPPQARGF 22 SECONDARY 22 2 493 KYVACVCVQGLVPR 506 SECONDARY 14 3 529 NVVVISVAIVIALPLTLLVCCSA 551 PRIMARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_056428 623 616103 100.0 100.0 XP_011537925 574 616103 100.0 92.1 NP_940908 679 615004,615058 35.8 89.2 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB7203 Download

>KIBB7203  1869 bp
ATGAGGGTGGCATTAGGCATGCTCTGGCTCTTGGCCCTTGCGTGGCCCCCCCAGGCCCGG
GGCTTCTGCCCCTCTCAATGCAGCTGCAGCCTCCATATCATGGGTGATGGCAGCAAGGCC
AGGACAGTAGTGTGCAACGACCCCGACATGACCCTGCCCCCGGCGTCCATCCCCCCGGAC
ACCTCCAGACTGCGCCTGGAGCGGACGGCCATACGCAGGGTTCCTGGCGAGGCCTTCAGG
CCCCTGGGCCGCCTGGAGCAGCTGTGGCTGCCTTACAACGCCCTCAGCGAGCTCAACGCC
CTCATGCTGCGGGGCCTGCGACGCCTGCGGGAGCTGCGGCTGCCCGGGAACCGCCTGGCC
GCCTTCCCCTGGGCGGCGCTCAGGGACGCCCCCAAGCTGCGGCTGCTGGACCTGCAGGCC
AACCGCCTCTCGGCTGTGCCCGCTGAGGCCGCGCGCTTCCTGGAGAACCTCACCTTCCTC
GACCTCTCCAGCAACCAGCTGATGAGGCTCCCGCAGGAGCTCATCGTCTCCTGGGCTCAC
CTGGAGACCGGTATCTTTCCTCCCGGCCACCACCCCAGGCGGGTCCTAGGGCTACAGGAC
AACCCCTGGGCATGTGACTGCCGACTCTATGACCTGGTTCATCTTTTGGATGGCTGGGCC
CCAAACTTGGCCTTCATTGAGACTGAACTGAGATGTGCCAGCCCACGTAGCCTGGCCGGA
GTGGCCTTCAGCCAGCTTGAACTGAGGAAGTGCCAGGGCCCAGAGCTCCATCCAGGAGTG
GCCAGCATCAGGTCCCTTTTGGGTGGCACAGCACTGCTACGCTGTGGAGCTACTGGAGTC
CCTGGGCCCGAGATGAGCTGGAGGAGGGCCAATGGCAGGCCCCTTAATGGTACAGTGCAC
CAGGAAGTCTCCAGTGACGGCACGAGCTGGACTCTGCTGGGCCTGCCTGCAGTGTCCCAC
CTTGACTCCGGAGACTACATCTGCCAAGCCAAGAACTTCCTGGGAGCCTCTGAAACTGTT
ATCTCCTTGATTGTCACTGAGCCACCGACTTCCACAGAACACAGTGGGAGCCCAGGAGCA
CTATGGGCAAGGACAGGTGGCGGAGGGGAAGCTGCTGCTTACAACAACAAGCTGGTGGCC
AGGCATGTCCCCCAGATTCCCAAACCCGCTGTCCTGGCCACTGGACCCTCTGTGCCCAGC
ACAAAGGAGGAGCTGACCCTTGAGCACTTCCAGATGGATGCCCTGGGAGAGCTCTCTGAT
GGGCGGGCAGGACCCTCAGAGGCACGAATGGTGAGGTCTGTGAAGGTGGTGGGGGACACT
TACCACAGCGTGTCCTTGGTGTGGAAGGCACCCCAGGCTAAGAACACAACTGCCTTCAGT
GTCCTCTACGCGGTCTTTGGGCAGCACAGCATGCGGCGGGTGATTGTGCAGCCTGGGAAG
ACCAGAGTGACCATCACTGGGCTGTTGCCCAAGACCAAGTATGTGGCGTGTGTCTGTGTG
CAGGGCCTGGTGCCCCGGAAGGAGCAGTGTGTTATTTTCTCCACCAATGAAGTGGTGGAT
GCTGAGAACACTCAGCAGCTTATCAATGTGGTGGTGATCAGTGTGGCCATCGTCATTGCC
CTGCCTCTCACGCTGCTTGTCTGCTGCAGTGCTCTTCAGAAGCGCTGCCGAAAGTGCTTC
AACAAGGACTCCACTGAGGCCACAGTTACCTACGTCAACCTAGAGAGACTGGGCTACAGC
GAGGACGGCTTGGAGGAGCTGTCCCGGCACAGTGTCAGCGAGGCTGACAGGCTTCTCTCA
GCTCGTTCCAGTGTGGACTTTCAGGCCTTTGGAGTCAAAGGGGGCAGGAGAATCAATGAG
TACTTCTGC

ORF Protein

Cloned ORF protein sequence for pF1KB7203 Download

>KIBB7203  623 aa
MRVALGMLWLLALAWPPQARGFCPSQCSCSLHIMGDGSKARTVVCNDPDMTLPPASIPPD
TSRLRLERTAIRRVPGEAFRPLGRLEQLWLPYNALSELNALMLRGLRRLRELRLPGNRLA
AFPWAALRDAPKLRLLDLQANRLSAVPAEAARFLENLTFLDLSSNQLMRLPQELIVSWAH
LETGIFPPGHHPRRVLGLQDNPWACDCRLYDLVHLLDGWAPNLAFIETELRCASPRSLAG
VAFSQLELRKCQGPELHPGVASIRSLLGGTALLRCGATGVPGPEMSWRRANGRPLNGTVH
QEVSSDGTSWTLLGLPAVSHLDSGDYICQAKNFLGASETVISLIVTEPPTSTEHSGSPGA
LWARTGGGGEAAAYNNKLVARHVPQIPKPAVLATGPSVPSTKEELTLEHFQMDALGELSD
GRAGPSEARMVRSVKVVGDTYHSVSLVWKAPQAKNTTAFSVLYAVFGQHSMRRVIVQPGK
TRVTITGLLPKTKYVACVCVQGLVPRKEQCVIFSTNEVVDAENTQQLINVVVISVAIVIA
LPLTLLVCCSALQKRCRKCFNKDSTEATVTYVNLERLGYSEDGLEELSRHSVSEADRLLS
ARSSVDFQAFGVKGGRRINEYFC

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB7203 Download

>pF1KB7203  4982 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGAGGGTGGCA
TTAGGCATGCTCTGGCTCTTGGCCCTTGCGTGGCCCCCCCAGGCCCGGGGCTTCTGCCCC
TCTCAATGCAGCTGCAGCCTCCATATCATGGGTGATGGCAGCAAGGCCAGGACAGTAGTG
TGCAACGACCCCGACATGACCCTGCCCCCGGCGTCCATCCCCCCGGACACCTCCAGACTG
CGCCTGGAGCGGACGGCCATACGCAGGGTTCCTGGCGAGGCCTTCAGGCCCCTGGGCCGC
CTGGAGCAGCTGTGGCTGCCTTACAACGCCCTCAGCGAGCTCAACGCCCTCATGCTGCGG
GGCCTGCGACGCCTGCGGGAGCTGCGGCTGCCCGGGAACCGCCTGGCCGCCTTCCCCTGG
GCGGCGCTCAGGGACGCCCCCAAGCTGCGGCTGCTGGACCTGCAGGCCAACCGCCTCTCG
GCTGTGCCCGCTGAGGCCGCGCGCTTCCTGGAGAACCTCACCTTCCTCGACCTCTCCAGC
AACCAGCTGATGAGGCTCCCGCAGGAGCTCATCGTCTCCTGGGCTCACCTGGAGACCGGT
ATCTTTCCTCCCGGCCACCACCCCAGGCGGGTCCTAGGGCTACAGGACAACCCCTGGGCA
TGTGACTGCCGACTCTATGACCTGGTTCATCTTTTGGATGGCTGGGCCCCAAACTTGGCC
TTCATTGAGACTGAACTGAGATGTGCCAGCCCACGTAGCCTGGCCGGAGTGGCCTTCAGC
CAGCTTGAACTGAGGAAGTGCCAGGGCCCAGAGCTCCATCCAGGAGTGGCCAGCATCAGG
TCCCTTTTGGGTGGCACAGCACTGCTACGCTGTGGAGCTACTGGAGTCCCTGGGCCCGAG
ATGAGCTGGAGGAGGGCCAATGGCAGGCCCCTTAATGGTACAGTGCACCAGGAAGTCTCC
AGTGACGGCACGAGCTGGACTCTGCTGGGCCTGCCTGCAGTGTCCCACCTTGACTCCGGA
GACTACATCTGCCAAGCCAAGAACTTCCTGGGAGCCTCTGAAACTGTTATCTCCTTGATT
GTCACTGAGCCACCGACTTCCACAGAACACAGTGGGAGCCCAGGAGCACTATGGGCAAGG
ACAGGTGGCGGAGGGGAAGCTGCTGCTTACAACAACAAGCTGGTGGCCAGGCATGTCCCC
CAGATTCCCAAACCCGCTGTCCTGGCCACTGGACCCTCTGTGCCCAGCACAAAGGAGGAG
CTGACCCTTGAGCACTTCCAGATGGATGCCCTGGGAGAGCTCTCTGATGGGCGGGCAGGA
CCCTCAGAGGCACGAATGGTGAGGTCTGTGAAGGTGGTGGGGGACACTTACCACAGCGTG
TCCTTGGTGTGGAAGGCACCCCAGGCTAAGAACACAACTGCCTTCAGTGTCCTCTACGCG
GTCTTTGGGCAGCACAGCATGCGGCGGGTGATTGTGCAGCCTGGGAAGACCAGAGTGACC
ATCACTGGGCTGTTGCCCAAGACCAAGTATGTGGCGTGTGTCTGTGTGCAGGGCCTGGTG
CCCCGGAAGGAGCAGTGTGTTATTTTCTCCACCAATGAAGTGGTGGATGCTGAGAACACT
CAGCAGCTTATCAATGTGGTGGTGATCAGTGTGGCCATCGTCATTGCCCTGCCTCTCACG
CTGCTTGTCTGCTGCAGTGCTCTTCAGAAGCGCTGCCGAAAGTGCTTCAACAAGGACTCC
ACTGAGGCCACAGTTACCTACGTCAACCTAGAGAGACTGGGCTACAGCGAGGACGGCTTG
GAGGAGCTGTCCCGGCACAGTGTCAGCGAGGCTGACAGGCTTCTCTCAGCTCGTTCCAGT
GTGGACTTTCAGGCCTTTGGAGTCAAAGGGGGCAGGAGAATCAATGAGTACTTCTGCGTT
TAAACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGC
TGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCA
ATAACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGG
AGGAACTATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGT
AAGCCCACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGC
CCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTT
CCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAA
TTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCT
TTCTTGCCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGATGA
CGGTCGTTTCGCATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTG
GAGAGGCTATTCGGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCCGCCGTG
TTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCC
CTGAATGAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCT
TGCGCAGCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAA
GTGCCGGGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATG
GCTGATGCAATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGACCACCAA
GCGAAACATCGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGAT
GATCTGGACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCG
CGTATGCCGGATGGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAATATC
ATGGTGGAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGAC
CGCTATCAGGACATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGG
GCTGACCGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTC
TATCGCCTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAG
CGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGG
GGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAA
GGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCG
ACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCC
TGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGC
CTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTC
GGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCG
CTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCC
ACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGA
GTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGC
TCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAAC
CACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGG
ATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTC
ACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATA
GTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAA
AATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGG
TATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGC
CATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTA
AGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTA
CTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACAGATTAA
ATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGT
CCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGG
GTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGA
AAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAA
ATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGAC
GCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTT
TTGCGTTTCTACAAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTC
AT