RBBP7 ORF clone FXC02182

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Flexi ORF Clone FXC02182

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Clone info.

Species

human

Clone Name

pF1KB5318 Sequence (with vector) Restriction Map

Product ID

FXC02182

HaloTag Clone PID

FHC02182

Original Clone PID

ORK02182

ORF Sequence

DNA sequence (1275 bp)
Protein sequence (425 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1KOF Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB463219]

Gene

KIBB5318

Symbol

RBBP7

Alias : RbAp46

Description

retinoblastoma binding protein 7, transcript variant 2

Original Clone ID

bm03493

Features of the cloned ORF sequence

Description

Length: 1275 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 425 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS14179.1 3.7e-139 100.0 RBBP7 CCDS56598.1 1.7e-137 99.3 RBBP7 CCDS44105.1 2e-125 89.4 RBBP4 CCDS366.1 7.6e-125 89.2 RBBP4 CCDS44106.1 1.5e-115 89.5 RBBP4 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR020472 192 206 PR00320 G-protein beta WD-40 repeat IPR020472 288 302 PR00320 G-protein beta WD-40 repeat IPR020472 332 346 PR00320 G-protein beta WD-40 repeat HMMPfam IPR022052 17 87 PF12265 Histone-binding protein RBBP4 IPR019781 170 205 PF00400 WD40 repeat IPR019781 218 255 PF00400 WD40 repeat IPR019781 264 301 PF00400 WD40 repeat IPR019781 308 345 PF00400 WD40 repeat IPR019781 365 401 PF00400 WD40 repeat HMMSmart IPR001680 113 152 SM00320 WD40 repeat IPR001680 165 205 SM00320 WD40 repeat IPR001680 215 255 SM00320 WD40 repeat IPR001680 261 301 SM00320 WD40 repeat IPR001680 305 345 SM00320 WD40 repeat IPR001680 362 402 SM00320 WD40 repeat ProfileScan IPR019782 172 214 PS50082 WD40 repeat 2 IPR017986 172 411 PS50294 WD40-repeat-containing domain IPR019782 222 264 PS50082 WD40 repeat 2 IPR019782 268 304 PS50082 WD40 repeat 2 IPR019782 312 354 PS50082 WD40 repeat 2 IPR019782 369 403 PS50082 WD40 repeat 2
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_002884 425 300825 100.0 100.0 NP_001185648 469 300825 99.3 99.3 NP_001128727 424 602923 89.4 100.0 NP_005601 425 602923 89.2 100.0 NP_001128728 390 602923 89.5 92.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB5318 Download

>KIBB5318  1275 bp
ATGGCGAGTAAAGAGATGTTTGAAGATACTGTGGAGGAGCGTGTCATCAATGAAGAATAT
AAAATCTGGAAGAAGAATACACCGTTTCTATATGACCTGGTTATGACCCATGCTCTTCAG
TGGCCCAGTCTTACCGTTCAGTGGCTTCCTGAAGTGACTAAACCTGAAGGAAAAGATTAT
GCCCTTCATTGGCTAGTGCTGGGGACTCATACGTCTGATGAGCAGAATCATCTGGTGGTT
GCTCGAGTACATATTCCCAATGATGATGCACAGTTTGATGCTTCCCATTGTGACAGTGAC
AAGGGTGAATTTGGTGGCTTTGGTTCTGTAACAGGAAAAATTGAATGTGAAATTAAAATC
AATCACGAAGGAGAAGTAAACCGTGCTCGTTACATGCCGCAGAATCCTCACATCATTGCT
ACAAAAACACCATCTTCTGATGTGTTGGTTTTTGACTATACAAAACACCCTGCTAAACCA
GACCCAAGTGGAGAATGTAATCCTGATCTCAGATTAAGAGGTCACCAGAAGGAAGGCTAT
GGTCTCTCCTGGAATTCAAATTTGAGTGGACATCTCCTAAGTGCATCTGATGACCATACT
GTTTGTCTGTGGGATATAAACGCAGGACCAAAAGAAGGCAAAATTGTGGATGCTAAAGCC
ATCTTTACTGGCCACTCAGCTGTTGTAGAGGATGTGGCCTGGCACCTGCTGCACGAGTCA
TTGTTTGGATCTGTTGCTGATGATCAGAAACTTATGATATGGGACACCAGGTCCAATACC
ACCTCCAAGCCGAGTCACTTGGTGGATGCGCACACTGCCGAAGTCAACTGCCTCTCATTC
AATCCCTACAGCGAATTTATTCTAGCCACCGGCTCTGCGGATAAGACCGTAGCTTTATGG
GATCTGCGTAACTTAAAATTAAAACTCCATACCTTCGAATCTCATAAAGATGAAATTTTC
CAGGTCCACTGGTCTCCACATAATGAAACTATTCTGGCTTCAAGTGGTACTGACCGCCGC
CTGAATGTGTGGGATTTAAGTAAAATTGGGGAAGAACAATCAGCAGAAGATGCAGAAGAT
GGGCCTCCAGAACTCCTGTTTATTCATGGAGGACACACTGCTAAGATTTCAGATTTTAGC
TGGAACCCCAATGAGCCTTGGGTCATTTGCTCAGTGTCTGAGGATAACATCATGCAGATA
TGGCAAATGGCTGAAAATATTTACAATGATGAAGAGTCAGATGTCACGACATCCGAACTG
GAGGGACAAGGATCT

ORF Protein

Cloned ORF protein sequence for pF1KB5318 Download

>KIBB5318  425 aa
MASKEMFEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDY
ALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKI
NHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGY
GLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHES
LFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALW
DLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAED
GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEESDVTTSEL
EGQGS

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB5318 Download

>pF1KB5318  4388 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGGCGAGTAAA
GAGATGTTTGAAGATACTGTGGAGGAGCGTGTCATCAATGAAGAATATAAAATCTGGAAG
AAGAATACACCGTTTCTATATGACCTGGTTATGACCCATGCTCTTCAGTGGCCCAGTCTT
ACCGTTCAGTGGCTTCCTGAAGTGACTAAACCTGAAGGAAAAGATTATGCCCTTCATTGG
CTAGTGCTGGGGACTCATACGTCTGATGAGCAGAATCATCTGGTGGTTGCTCGAGTACAT
ATTCCCAATGATGATGCACAGTTTGATGCTTCCCATTGTGACAGTGACAAGGGTGAATTT
GGTGGCTTTGGTTCTGTAACAGGAAAAATTGAATGTGAAATTAAAATCAATCACGAAGGA
GAAGTAAACCGTGCTCGTTACATGCCGCAGAATCCTCACATCATTGCTACAAAAACACCA
TCTTCTGATGTGTTGGTTTTTGACTATACAAAACACCCTGCTAAACCAGACCCAAGTGGA
GAATGTAATCCTGATCTCAGATTAAGAGGTCACCAGAAGGAAGGCTATGGTCTCTCCTGG
AATTCAAATTTGAGTGGACATCTCCTAAGTGCATCTGATGACCATACTGTTTGTCTGTGG
GATATAAACGCAGGACCAAAAGAAGGCAAAATTGTGGATGCTAAAGCCATCTTTACTGGC
CACTCAGCTGTTGTAGAGGATGTGGCCTGGCACCTGCTGCACGAGTCATTGTTTGGATCT
GTTGCTGATGATCAGAAACTTATGATATGGGACACCAGGTCCAATACCACCTCCAAGCCG
AGTCACTTGGTGGATGCGCACACTGCCGAAGTCAACTGCCTCTCATTCAATCCCTACAGC
GAATTTATTCTAGCCACCGGCTCTGCGGATAAGACCGTAGCTTTATGGGATCTGCGTAAC
TTAAAATTAAAACTCCATACCTTCGAATCTCATAAAGATGAAATTTTCCAGGTCCACTGG
TCTCCACATAATGAAACTATTCTGGCTTCAAGTGGTACTGACCGCCGCCTGAATGTGTGG
GATTTAAGTAAAATTGGGGAAGAACAATCAGCAGAAGATGCAGAAGATGGGCCTCCAGAA
CTCCTGTTTATTCATGGAGGACACACTGCTAAGATTTCAGATTTTAGCTGGAACCCCAAT
GAGCCTTGGGTCATTTGCTCAGTGTCTGAGGATAACATCATGCAGATATGGCAAATGGCT
GAAAATATTTACAATGATGAAGAGTCAGATGTCACGACATCCGAACTGGAGGGACAAGGA
TCTGTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCAT
GCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGC
TGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCT
GAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCG
CCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCA
GATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTA
CGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCA
AAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGG
ATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACA
GGATGACGGTCGTTTCGCATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCT
TGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCC
GCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCC
GGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGC
GTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTG
GGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCC
ATCATGGCTGATGCAATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGAC
CACCAAGCGAAACATCGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGAT
CAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTC
AAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCG
AATATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTG
GCGGACCGCTATCAGGACATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGC
GAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATC
GCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCG
ACCAAGCGACGCCCAACCGGACTATAAAAGGATCTAGGTGAAGATCCTTTTTGATAATCT
CATGACCAAAATCCCTTAACGTGAGTTTTCGTTCCACTGAGCGTCAGACCCCGTAGAAAA
GATCAAAGGATCTTCTTGAAATCCTTTTTTTCTGCGCGTAATCTGCTGCTTGCAAACAAA
AAAACCACCGCTACCAGCGGTGGTTTGTTTGCCGGATCAAGAGCTACCAACTCTTTTTCC
GAAGGTAACTGGCTTCAGCAGAGCGCAGATACCAAATACTGTCCTTCTAGTGTAGCCGTA
GTTAGGCCACCACTTCAAGAACTCTGTAGCACCGCCTACATACCTCGCTCTGCTAATCCT
GTTACCAGTGGCTGCTGCCAGTGGCGATAAGTCGTGTCTTACCGGGTTGGACTCAAGACG
ATAGTTACCGGATAAGGCGCAGCGGTCGGGCTGAACGGGGGGTTCGTGCACACAGCCCAG
CTTGGAGCGAACGACCTACACCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGC
CACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGG
AGAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCTGGTATCTTTATAGTCCTGTCGGGTT
TCGCCACCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATG
GAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCA
CATGTTCTTTCCTGCGTTATCCCCTGATTCTGTGGATAACCGTATTACCGCCTTTGAGTG
AGCTGATACCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACC
ATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTG
CATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTT
TGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTA
CAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACC
GCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACA
GATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGC
GGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAG
TGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTC
AGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTA
GGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGG
CAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATG
GCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTAT
CCGCTCAT