COPS7A ORF clone FXC02176

KOP
KOP Flexi HaloTag ORF List search

Flexi ORF Clone FXC02176

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Clone info.

Species

human

Clone Name

pF1KB5251 Sequence (with vector) Restriction Map

Product ID

FXC02176

HaloTag Clone PID

FHC02176

Original Clone PID

ORK02176

ORF Sequence

DNA sequence (825 bp)
Protein sequence (275 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB463540]

Gene

KIBB5251

Symbol

COPS7A

Alias : CSN7, CSN7A, SGN7a

Description

COP9 signalosome subunit 7A, transcript variant 4

Original Clone ID

bm04925

Features of the cloned ORF sequence

Description

Length: 825 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 275 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS8558.1 1.3e-98 100.0 COPS7A CCDS2488.1 3.2e-54 57.7 COPS7B CCDS77539.1 2.3e-46 58.3 COPS7B CCDS63153.1 1.4e-45 59.4 COPS7B CCDS63152.1 3.8e-42 56.8 COPS7B The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR000717 63 154 PF01399 Proteasome component (PCI) domain HMMSmart IPR000717 87 177 SM00088 Proteasome component (PCI) domain
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_057403 275 616009 100.0 100.0 NP_001157565 275 616009 100.0 100.0 NP_001157567 275 616009 100.0 100.0 NP_001157566 275 616009 100.0 100.0 XP_005253751 275 616009 100.0 100.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB5251 Download

>KIBB5251  825 bp
ATGAGTGCGGAAGTGAAGGTGACAGGGCAGAACCAGGAGCAATTTCTGCTCCTAGCCAAG
TCGGCCAAGGGGGCAGCGCTGGCCACACTCATCCATCAGGTGCTGGAGGCCCCTGGTGTC
TACGTGTTTGGAGAACTGCTGGACATGCCCAATGTTAGAGAGCTGGCTGAGAGTGACTTT
GCCTCTACCTTCCGGCTGCTCACAGTGTTTGCTTATGGGACATACGCTGACTACTTAGCT
GAAGCCCGGAATCTTCCTCCACTAACAGAGGCTCAGAAGAATAAGCTTCGACACCTCTCA
GTTGTCACCCTGGCTGCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTT
GCCCTGCGTAATGTGCGGCAGCTGGAAGACCTTGTGATTGAGGCTGTGTATGCTGACGTG
CTTCGTGGCTCCCTGGACCAGCGCAACCAGCGGCTCGAGGTTGACTACAGCATCGGGCGG
GACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAACCCTGCAGGAATGGTGTGTGGGC
TGTGAGGTCGTGCTGTCAGGCATTGAGGAGCAGGTGAGCCGTGCCAACCAACACAAGGAG
CAGCAGCTGGGCCTGAAGCAGCAGATTGAGAGTGAGGTTGCCAACCTTAAAAAAACCATT
AAAGTTACGACGGCAGCAGCAGCCGCAGCCACATCTCAGGACCCTGAGCAACACCTGACT
GAGCTGAGGGAACCAGCTCCTGGCACCAACCAGCGCCAGCCCAGCAAGAAAGCCTCAAAG
GGCAAGGGGCTCCGAGGGAGCGCCAAGATTTGGTCCAAGTCGAAT

ORF Protein

Cloned ORF protein sequence for pF1KB5251 Download

>KIBB5251  275 aa
MSAEVKVTGQNQEQFLLLAKSAKGAALATLIHQVLEAPGVYVFGELLDMPNVRELAESDF
ASTFRLLTVFAYGTYADYLAEARNLPPLTEAQKNKLRHLSVVTLAAKVKCIPYAVLLEAL
ALRNVRQLEDLVIEAVYADVLRGSLDQRNQRLEVDYSIGRDIQRQDLSAIARTLQEWCVG
CEVVLSGIEEQVSRANQHKEQQLGLKQQIESEVANLKKTIKVTTAAAAAATSQDPEQHLT
ELREPAPGTNQRQPSKKASKGKGLRGSAKIWSKSN

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB5251 Download

>pF1KB5251  3938 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGAGTGCGGAA
GTGAAGGTGACAGGGCAGAACCAGGAGCAATTTCTGCTCCTAGCCAAGTCGGCCAAGGGG
GCAGCGCTGGCCACACTCATCCATCAGGTGCTGGAGGCCCCTGGTGTCTACGTGTTTGGA
GAACTGCTGGACATGCCCAATGTTAGAGAGCTGGCTGAGAGTGACTTTGCCTCTACCTTC
CGGCTGCTCACAGTGTTTGCTTATGGGACATACGCTGACTACTTAGCTGAAGCCCGGAAT
CTTCCTCCACTAACAGAGGCTCAGAAGAATAAGCTTCGACACCTCTCAGTTGTCACCCTG
GCTGCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAAT
GTGCGGCAGCTGGAAGACCTTGTGATTGAGGCTGTGTATGCTGACGTGCTTCGTGGCTCC
CTGGACCAGCGCAACCAGCGGCTCGAGGTTGACTACAGCATCGGGCGGGACATCCAGCGC
CAGGACCTCAGTGCCATTGCCCGAACCCTGCAGGAATGGTGTGTGGGCTGTGAGGTCGTG
CTGTCAGGCATTGAGGAGCAGGTGAGCCGTGCCAACCAACACAAGGAGCAGCAGCTGGGC
CTGAAGCAGCAGATTGAGAGTGAGGTTGCCAACCTTAAAAAAACCATTAAAGTTACGACG
GCAGCAGCAGCCGCAGCCACATCTCAGGACCCTGAGCAACACCTGACTGAGCTGAGGGAA
CCAGCTCCTGGCACCAACCAGCGCCAGCCCAGCAAGAAAGCCTCAAAGGGCAAGGGGCTC
CGAGGGAGCGCCAAGATTTGGTCCAAGTCGAATGTTTAAACGAATTCGAGCTCGGTACCC
GGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCG
AAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGC
CTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCTTGC
TGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTGCTT
TCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGG
TCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCG
CCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGT
AAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGATGG
CGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAACAA
GATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGACTGG
GCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGC
CCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAGGCA
GCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTC
ACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCA
TCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCAATGCGGCGGCTGCAT
ACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCGAAACATCGCATCGAGCGAGCA
CGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAGCATCAGGGG
CTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGATCTC
GTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTTTCT
GGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTGGCT
ACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTTTAC
GGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTCTTC
TGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCA
CTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTG
AGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCA
TAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAA
CCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCC
TGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGC
GCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCT
GGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCG
TCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAG
GATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTA
CGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGG
AAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTT
TGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTT
TTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAG
ATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGC
TGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGT
GGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCA
GGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTG
ATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTAC
TGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGT
AGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGAT
AAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTC
AGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAA
CTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCT
GTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACG
TTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATC
AAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTTTGT
TTATTTTTCTAAATACATTCAAATATGTATCCGCTCAT