PSD3 ORF clone FXC02005

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Flexi ORF Clone FXC02005

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Clone info.

Species

human

Clone Name

pF1KA0942 Sequence (with vector) Restriction Map

Product ID

FXC02005

HaloTag Clone PID

FHC02005

ORF Sequence

DNA sequence (1539 bp)
Protein sequence (513 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1KOF Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB463178]

Gene

KIAA0942

Symbol

PSD3

Alias : EFA6D, EFA6R, HCA67

Description

pleckstrin and Sec7 domain containing 3, transcript variant 2

Original Clone ID

hh04979m1

Features of the cloned ORF sequence

Description

Length: 1539 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 513 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS34854.1 3.7e-193 100.0 PSD3 CCDS43720.1 5.5e-187 100.0 PSD3 CCDS4216.1 2e-108 62.8 PSD2 CCDS73187.1 4.5e-106 59.0 PSD CCDS31272.1 6.7e-106 59.0 PSD The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR001605 253 272 PR00683 Spectrin/pleckstrin-like IPR001605 318 335 PR00683 Spectrin/pleckstrin-like IPR001605 338 356 PR00683 Spectrin/pleckstrin-like HMMPfam IPR000904 29 200 PF01369 SEC7-like IPR001849 252 359 PF00169 Pleckstrin homology domain HMMSmart IPR000904 14 201 SM00222 SEC7-like IPR001849 251 365 SM00233 Pleckstrin homology domain ProfileScan IPR000904 14 199 PS50190 SEC7-like IPR001849 250 363 PS50003 Pleckstrin homology domain
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_996792 513 614440 100.0 100.0 XP_016868754 511 614440 100.0 97.9 XP_016868750 1014 614440 100.0 97.9 XP_016868749 1046 614440 100.0 97.9 NP_056125 1047 614440 100.0 97.9 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KA0942 Download

>KIAA0942  1539 bp
ATGGGCTCTTCTTGGTGTCTGTATGGTTGCTGCAATGCTGGGGTGAAAACAACACGGCTA
GAAGCTCATTCTGAAATGGGGAGCACTGAAATTTTGGAAAAGGAGACCCCAGAAAATCTC
AGTAATGGTACCAGCAGCAATGTGGAAGCAGCCAAAAGGTTGGCCAAACGCCTTTATCAG
CTGGACAGATTCAAAAGATCAGATGTTGCAAAACACCTTGGCAAGAACAACGAATTTAGC
AAACTAGTTGCAGAAGAATATCTGAAGTTTTTTGATTTTACAGGAATGACGCTGGATCAG
TCACTCAGGTATTTCTTTAAAGCATTCTCTCTTGTGGGAGAAACTCAAGAACGAGAGAGA
GTTTTAATACACTTCTCCAATAGATATTTTTATTGTAACCCAGATACCATTGCTTCACAA
GATGGAGTCCATTGCCTTACCTGTGCAATAATGCTTCTTAATACCGATCTACATGGCCAC
AATATTGGAAAGAAGATGACCTGTCAGGAGTTCATTGCAAATCTGCAAGGGGTAAATGAG
GGTGTTGATTTCTCCAAGGATCTGCTGAAAGCTCTGTACAACTCAATCAAGAATGAGAAG
CTTGAATGGGCAGTAGATGATGAAGAGAAAAAAAAGTCTCCCTCAGAAAGTACTGAGGAG
AAAGCTAACGGAACACATCCAAAGACCATCAGTCGTATTGGAAGTACTACTAACCCATTT
TTGGACATTCCTCATGATCCAAATGCTGCTGTGTACAAAAGTGGATTCTTGGCTCGGAAA
ATTCATGCAGATATGGATGGAAAGAAGACTCCAAGAGGAAAACGAGGATGGAAAACCTTT
TATGCTGTACTGAAGGGAACAGTTCTTTACTTGCAAAAGGATGAATACAAGCCAGAAAAG
GCCTTGTCTGAAGAGGACTTGAAAAACGCTGTGAGTGTGCACCACGCATTGGCATCCAAG
GCCACGGACTATGAGAAGAAACCAAACGTGTTCAAACTTAAAACTGCCGACTGGAGGGTC
TTGCTTTTTCAAACTCAGAGCCCAGAGGAAATGCAAGGGTGGATAAACAAAATCAATTGT
GTGGCAGCTGTATTTTCTGCACCACCATTTCCAGCAGCAATCGGCTCTCAGAAGAAGTTT
AGCCGCCCACTTCTGCCTGCCACTACAACAAAACTGTCTCAGGAGGAGCAACTGAAGTCA
CATGAAAGTAAGCTGAAGCAGATCACCACCGAGCTGGCCGAGCACCGCTCATATCCCCCC
GACAAGAAGGTCAAAGCCAAGGACGTCGATGAGTACAAACTGAAAGACCACTATCTGGAG
TTTGAGAAAACCCGCTATGAAATGTATGTCAGCATTCTCAAGGAAGGAGGCAAAGAGCTA
CTGAGTAACGATGAAAGCGAGGCTGCAGGACTGAAGAAGTCGCACTCGAGTCCTTCGCTG
AACCCGGATACTTCTCCAATCACTGCCAAAGTCAAGCGTAACGTGTCAGAGAGGAAGGAT
CACCGACCTGAAACACCAAGCATTAAGCAAAAAGTTACT

ORF Protein

Cloned ORF protein sequence for pF1KA0942 Download

>KIAA0942  513 aa
MGSSWCLYGCCNAGVKTTRLEAHSEMGSTEILEKETPENLSNGTSSNVEAAKRLAKRLYQ
LDRFKRSDVAKHLGKNNEFSKLVAEEYLKFFDFTGMTLDQSLRYFFKAFSLVGETQERER
VLIHFSNRYFYCNPDTIASQDGVHCLTCAIMLLNTDLHGHNIGKKMTCQEFIANLQGVNE
GVDFSKDLLKALYNSIKNEKLEWAVDDEEKKKSPSESTEEKANGTHPKTISRIGSTTNPF
LDIPHDPNAAVYKSGFLARKIHADMDGKKTPRGKRGWKTFYAVLKGTVLYLQKDEYKPEK
ALSEEDLKNAVSVHHALASKATDYEKKPNVFKLKTADWRVLLFQTQSPEEMQGWINKINC
VAAVFSAPPFPAAIGSQKKFSRPLLPATTTKLSQEEQLKSHESKLKQITTELAEHRSYPP
DKKVKAKDVDEYKLKDHYLEFEKTRYEMYVSILKEGGKELLSNDESEAAGLKKSHSSPSL
NPDTSPITAKVKRNVSERKDHRPETPSIKQKVT

ORF+Vector

Nucleotide Sequence (with vector) for pF1KA0942 Download

>pF1KA0942  4652 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGGGCTCTTCT
TGGTGTCTGTATGGTTGCTGCAATGCTGGGGTGAAAACAACACGGCTAGAAGCTCATTCT
GAAATGGGGAGCACTGAAATTTTGGAAAAGGAGACCCCAGAAAATCTCAGTAATGGTACC
AGCAGCAATGTGGAAGCAGCCAAAAGGTTGGCCAAACGCCTTTATCAGCTGGACAGATTC
AAAAGATCAGATGTTGCAAAACACCTTGGCAAGAACAACGAATTTAGCAAACTAGTTGCA
GAAGAATATCTGAAGTTTTTTGATTTTACAGGAATGACGCTGGATCAGTCACTCAGGTAT
TTCTTTAAAGCATTCTCTCTTGTGGGAGAAACTCAAGAACGAGAGAGAGTTTTAATACAC
TTCTCCAATAGATATTTTTATTGTAACCCAGATACCATTGCTTCACAAGATGGAGTCCAT
TGCCTTACCTGTGCAATAATGCTTCTTAATACCGATCTACATGGCCACAATATTGGAAAG
AAGATGACCTGTCAGGAGTTCATTGCAAATCTGCAAGGGGTAAATGAGGGTGTTGATTTC
TCCAAGGATCTGCTGAAAGCTCTGTACAACTCAATCAAGAATGAGAAGCTTGAATGGGCA
GTAGATGATGAAGAGAAAAAAAAGTCTCCCTCAGAAAGTACTGAGGAGAAAGCTAACGGA
ACACATCCAAAGACCATCAGTCGTATTGGAAGTACTACTAACCCATTTTTGGACATTCCT
CATGATCCAAATGCTGCTGTGTACAAAAGTGGATTCTTGGCTCGGAAAATTCATGCAGAT
ATGGATGGAAAGAAGACTCCAAGAGGAAAACGAGGATGGAAAACCTTTTATGCTGTACTG
AAGGGAACAGTTCTTTACTTGCAAAAGGATGAATACAAGCCAGAAAAGGCCTTGTCTGAA
GAGGACTTGAAAAACGCTGTGAGTGTGCACCACGCATTGGCATCCAAGGCCACGGACTAT
GAGAAGAAACCAAACGTGTTCAAACTTAAAACTGCCGACTGGAGGGTCTTGCTTTTTCAA
ACTCAGAGCCCAGAGGAAATGCAAGGGTGGATAAACAAAATCAATTGTGTGGCAGCTGTA
TTTTCTGCACCACCATTTCCAGCAGCAATCGGCTCTCAGAAGAAGTTTAGCCGCCCACTT
CTGCCTGCCACTACAACAAAACTGTCTCAGGAGGAGCAACTGAAGTCACATGAAAGTAAG
CTGAAGCAGATCACCACCGAGCTGGCCGAGCACCGCTCATATCCCCCCGACAAGAAGGTC
AAAGCCAAGGACGTCGATGAGTACAAACTGAAAGACCACTATCTGGAGTTTGAGAAAACC
CGCTATGAAATGTATGTCAGCATTCTCAAGGAAGGAGGCAAAGAGCTACTGAGTAACGAT
GAAAGCGAGGCTGCAGGACTGAAGAAGTCGCACTCGAGTCCTTCGCTGAACCCGGATACT
TCTCCAATCACTGCCAAAGTCAAGCGTAACGTGTCAGAGAGGAAGGATCACCGACCTGAA
ACACCAAGCATTAAGCAAAAAGTTACTGTTTAAACGAATTCGAGCTCGGTACCCGGGGAT
CCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGA
AGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAA
ACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCA
TAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTT
TGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCA
CCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGA
GTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTT
GGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGG
GGATCAAGATCTGATCAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAACAAGATGGA
TTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAA
CAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTT
CTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGG
CTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAA
GCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCAC
CTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCAATGCGGCGGCTGCATACGCTT
GATCCGGCTACCTGCCCATTCGACCACCAAGCGAAACATCGCATCGAGCGAGCACGCACT
CGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCG
CCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTG
ACTCATGGCGATGCCTGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTTTCTGGATTC
ATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTGGCTACCCGT
GATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATC
GCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCG
GGACTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCAACCGGACTATAAAAGGATCTA
GGTGAAGATCCTTTTTGATAATCTCATGACCAAAATCCCTTAACGTGAGTTTTCGTTCCA
CTGAGCGTCAGACCCCGTAGAAAAGATCAAAGGATCTTCTTGAAATCCTTTTTTTCTGCG
CGTAATCTGCTGCTTGCAAACAAAAAAACCACCGCTACCAGCGGTGGTTTGTTTGCCGGA
TCAAGAGCTACCAACTCTTTTTCCGAAGGTAACTGGCTTCAGCAGAGCGCAGATACCAAA
TACTGTCCTTCTAGTGTAGCCGTAGTTAGGCCACCACTTCAAGAACTCTGTAGCACCGCC
TACATACCTCGCTCTGCTAATCCTGTTACCAGTGGCTGCTGCCAGTGGCGATAAGTCGTG
TCTTACCGGGTTGGACTCAAGACGATAGTTACCGGATAAGGCGCAGCGGTCGGGCTGAAC
GGGGGGTTCGTGCACACAGCCCAGCTTGGAGCGAACGACCTACACCGAACTGAGATACCT
ACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCC
GGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCTG
GTATCTTTATAGTCCTGTCGGGTTTCGCCACCTCTGACTTGAGCGTCGATTTTTGTGATG
CTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCT
GGCCTTTTGCTGGCCTTTTGCTCACATGTTCTTTCCTGCGTTATCCCCTGATTCTGTGGA
TAACCGTATTACCGCCTTTGAGTGAGCTGATACCGGAAATACAGGAACGCACGCTGGATG
GCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGT
AATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCG
ATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCG
CTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTG
CCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGA
TCGAGATCTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACA
GAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGT
GAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCA
GGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTT
TGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGA
AGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTA
AGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTT
TTCTAAATACATTCAAATATGTATCCGCTCAT