SEMA3C ORF clone FXC01840

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Flexi ORF Clone FXC01840

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Clone info.

Species

human

Clone Name

pF1KB7019 Sequence (with vector) Restriction Map

Product ID

FXC01840

HaloTag Clone PID

FHC01840

Original Clone PID

ORK01840

ORF Sequence

DNA sequence (2253 bp)
Protein sequence (751 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1KOF Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB385180]

Gene

KIBB7019

Symbol

SEMA3C

Alias : SEMAE, SemE

Description

sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C

Original Clone ID

hj05106

Features of the cloned ORF sequence

Description

Length: 2253 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 751 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS5596.1 0 100.0 SEMA3C CCDS82779.1 4.1e-169 54.7 SEMA3F CCDS82780.1 2.7e-161 54.9 SEMA3F CCDS5599.1 1.6e-140 44.9 SEMA3A CCDS2811.1 3.4e-138 52.4 SEMA3F The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR001627 54 495 PF01403 Semaphorin/CD100 antigen IPR013098 589 661 PF07679 Immunoglobulin I-set HMMSmart IPR001627 54 495 SM00630 Semaphorin/CD100 antigen IPR003659 513 565 SM00423 Plexin/semaphorin/integrin IPR003599 577 662 SM00409 Immunoglobulin subtype ProfileScan IPR001627 28 511 PS51004 Semaphorin/CD100 antigen IPR007110 590 655 PS50835 Immunoglobulin-like
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 2 AFRTICVLVGVFICSICVKGSS 23 PRIMARY 22
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_006370 751 602645 100.0 100.0 XP_005250170 693 602645 100.0 92.3 XP_005265439 754 601124 54.7 96.4 NP_001305729 754 601124 54.7 96.4 NP_001305727 686 601124 54.9 91.3 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB7019 Download

>KIBB7019  2253 bp
ATGGCATTCCGGACAATTTGCGTGTTGGTTGGAGTATTTATTTGTTCTATCTGTGTGAAA
GGATCTTCCCAGCCCCAAGCAAGAGTTTATTTAACATTTGATGAACTTCGAGAAACCAAG
ACCTCTGAATACTTCAGCCTTTCCCACCATCCTTTAGACTACAGGATTTTATTAATGGAT
GAAGATCAGGACCGGATATATGTGGGAAGCAAAGATCACATTCTTTCCCTGAATATTAAC
AATATAAGTCAAGAAGCTTTGAGTGTTTTCTGGCCAGCATCTACAATCAAAGTTGAAGAA
TGCAAAATGGCTGGCAAAGATCCCACACACGGCTGTGGGAACTTTGTCCGTGTAATTCAG
ACTTTCAATCGCACACATTTGTATGTCTGTGGGAGTGGCGCTTTCAGTCCTGTCTGTACT
TACTTGAACAGAGGGAGGAGATCAGAGGACCAAGTTTTCATGATTGACTCCAAGTGTGAA
TCTGGAAAAGGACGCTGCTCTTTCAACCCCAACGTGAACACGGTGTCTGTTATGATCAAT
GAGGAGCTTTTCTCTGGAATGTATATAGATTTCATGGGGACAGATGCTGCTATTTTTCGA
AGTTTAACCAAGAGGAATGCGGTCAGAACTGATCAACATAATTCCAAATGGCTAAGTGAA
CCTATGTTTGTAGATGCACATGTCATCCCAGATGGTACTGATCCAAATGATGCTAAGGTG
TACTTCTTCTTCAAAGAAAAACTGACTGACAATAACAGGAGCACGAAACAGATTCATTCC
ATGATTGCTCGAATATGTCCTAATGACACTGGTGGACTGCGTAGCCTTGTCAACAAGTGG
ACCACTTTCTTAAAGGCGAGGCTGGTGTGCTCGGTAACAGATGAAGACGGCCCAGAAACA
CACTTTGATGAATTAGAGGATGTGTTTCTGCTGGAAACTGATAACCCGAGGACAACACTA
GTGTATGGCATTTTTACAACATCAAGCTCAGTTTTCAAAGGATCAGCCGTGTGTGTGTAT
CATTTATCTGATATACAGACTGTTTTTAATGGGCCTTTTGCCCACAAAGAAGGGCCCAAT
CATCAGCTGATTTCCTATCAGGGCAGAATTCCATATCCTCGCCCTGGAACTTGTCCAGGA
GGAGCATTTACACCCAATATGCGAACCACCAAGGAGTTCCCAGATGATGTTGTCACTTTT
ATTCGGAACCATCCTCTCATGTACAATTCCATCTACCCAATCCACAAAAGGCCTTTGATT
GTTCGTATTGGCACTGACTACAAGTATACAAAGATAGCTGTGGATCGAGTGAACGCTGCT
GATGGGAGATACCATGTCCTGTTTCTCGGAACAGATCGGGGTACTGTGCAAAAAGTGGTT
GTTCTTCCTACTAACAACTCTGTCAGTGGCGAGCTCATTCTGGAGGAGCTGGAAGTCTTT
AAGAATCATGCTCCTATAACAACAATGAAAATTTCATCTAAAAAGCAACAGTTGTATGTG
AGTTCCAATGAAGGGGTTTCCCAGGTATCTCTGCACCGCTGCCACATCTATGGTACAGCC
TGTGCTGACTGCTGCCTGGCGCGGGACCCTTATTGCGCCTGGGATGGCCATTCCTGTTCC
AGATTCTACCCAACTGGGAAACGGAGGAGCCGAAGACAAGATGTGAGACATGGAAACCCA
CTGACTCAATGCAGAGGATTTAATCTAAAAGCATACAGAAATGCAGCTGAAATTGTGCAG
TATGGAGTAAAAAATAACACCACTTTTCTGGAGTGTGCCCCCAAGTCTCCGCAGGCATCT
ATCAAGTGGCTGTTACAGAAAGACAAAGACAGGAGGAAAGAGGTTAAGCTGAATGAACGA
ATAATAGCCACTTCACAGGGACTCCTGATCCGCTCTGTTCAGGGTTCTGACCAAGGACTT
TATCACTGCATTGCTACAGAAAATAGTTTCAAGCAGACCATAGCCAAGATCAACTTCAAA
GTTTTAGATTCAGAAATGGTGGCTGTTGTGACGGACAAATGGTCCCCGTGGACCTGGGCC
AGCTCTGTGAGGGCTTTACCCTTCCACCCGAAGGACATCATGGGGGCATTCAGCCACTCA
GAAATGCAGATGATTAACCAATACTGCAAAGACACTCGGCAGCAACATCAGCAGGGAGAT
GAATCACAGAAAATGAGAGGGGACTATGGCAAGTTAAAGGCCCTCATCAATAGTCGGAAA
AGTAGAAACAGGAGGAATCAGTTGCCAGAGTCA

ORF Protein

Cloned ORF protein sequence for pF1KB7019 Download

>KIBB7019  751 aa
MAFRTICVLVGVFICSICVKGSSQPQARVYLTFDELRETKTSEYFSLSHHPLDYRILLMD
EDQDRIYVGSKDHILSLNINNISQEALSVFWPASTIKVEECKMAGKDPTHGCGNFVRVIQ
TFNRTHLYVCGSGAFSPVCTYLNRGRRSEDQVFMIDSKCESGKGRCSFNPNVNTVSVMIN
EELFSGMYIDFMGTDAAIFRSLTKRNAVRTDQHNSKWLSEPMFVDAHVIPDGTDPNDAKV
YFFFKEKLTDNNRSTKQIHSMIARICPNDTGGLRSLVNKWTTFLKARLVCSVTDEDGPET
HFDELEDVFLLETDNPRTTLVYGIFTTSSSVFKGSAVCVYHLSDIQTVFNGPFAHKEGPN
HQLISYQGRIPYPRPGTCPGGAFTPNMRTTKEFPDDVVTFIRNHPLMYNSIYPIHKRPLI
VRIGTDYKYTKIAVDRVNAADGRYHVLFLGTDRGTVQKVVVLPTNNSVSGELILEELEVF
KNHAPITTMKISSKKQQLYVSSNEGVSQVSLHRCHIYGTACADCCLARDPYCAWDGHSCS
RFYPTGKRRSRRQDVRHGNPLTQCRGFNLKAYRNAAEIVQYGVKNNTTFLECAPKSPQAS
IKWLLQKDKDRRKEVKLNERIIATSQGLLIRSVQGSDQGLYHCIATENSFKQTIAKINFK
VLDSEMVAVVTDKWSPWTWASSVRALPFHPKDIMGAFSHSEMQMINQYCKDTRQQHQQGD
ESQKMRGDYGKLKALINSRKSRNRRNQLPES

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB7019 Download

>pF1KB7019  5366 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGGCATTCCGG
ACAATTTGCGTGTTGGTTGGAGTATTTATTTGTTCTATCTGTGTGAAAGGATCTTCCCAG
CCCCAAGCAAGAGTTTATTTAACATTTGATGAACTTCGAGAAACCAAGACCTCTGAATAC
TTCAGCCTTTCCCACCATCCTTTAGACTACAGGATTTTATTAATGGATGAAGATCAGGAC
CGGATATATGTGGGAAGCAAAGATCACATTCTTTCCCTGAATATTAACAATATAAGTCAA
GAAGCTTTGAGTGTTTTCTGGCCAGCATCTACAATCAAAGTTGAAGAATGCAAAATGGCT
GGCAAAGATCCCACACACGGCTGTGGGAACTTTGTCCGTGTAATTCAGACTTTCAATCGC
ACACATTTGTATGTCTGTGGGAGTGGCGCTTTCAGTCCTGTCTGTACTTACTTGAACAGA
GGGAGGAGATCAGAGGACCAAGTTTTCATGATTGACTCCAAGTGTGAATCTGGAAAAGGA
CGCTGCTCTTTCAACCCCAACGTGAACACGGTGTCTGTTATGATCAATGAGGAGCTTTTC
TCTGGAATGTATATAGATTTCATGGGGACAGATGCTGCTATTTTTCGAAGTTTAACCAAG
AGGAATGCGGTCAGAACTGATCAACATAATTCCAAATGGCTAAGTGAACCTATGTTTGTA
GATGCACATGTCATCCCAGATGGTACTGATCCAAATGATGCTAAGGTGTACTTCTTCTTC
AAAGAAAAACTGACTGACAATAACAGGAGCACGAAACAGATTCATTCCATGATTGCTCGA
ATATGTCCTAATGACACTGGTGGACTGCGTAGCCTTGTCAACAAGTGGACCACTTTCTTA
AAGGCGAGGCTGGTGTGCTCGGTAACAGATGAAGACGGCCCAGAAACACACTTTGATGAA
TTAGAGGATGTGTTTCTGCTGGAAACTGATAACCCGAGGACAACACTAGTGTATGGCATT
TTTACAACATCAAGCTCAGTTTTCAAAGGATCAGCCGTGTGTGTGTATCATTTATCTGAT
ATACAGACTGTTTTTAATGGGCCTTTTGCCCACAAAGAAGGGCCCAATCATCAGCTGATT
TCCTATCAGGGCAGAATTCCATATCCTCGCCCTGGAACTTGTCCAGGAGGAGCATTTACA
CCCAATATGCGAACCACCAAGGAGTTCCCAGATGATGTTGTCACTTTTATTCGGAACCAT
CCTCTCATGTACAATTCCATCTACCCAATCCACAAAAGGCCTTTGATTGTTCGTATTGGC
ACTGACTACAAGTATACAAAGATAGCTGTGGATCGAGTGAACGCTGCTGATGGGAGATAC
CATGTCCTGTTTCTCGGAACAGATCGGGGTACTGTGCAAAAAGTGGTTGTTCTTCCTACT
AACAACTCTGTCAGTGGCGAGCTCATTCTGGAGGAGCTGGAAGTCTTTAAGAATCATGCT
CCTATAACAACAATGAAAATTTCATCTAAAAAGCAACAGTTGTATGTGAGTTCCAATGAA
GGGGTTTCCCAGGTATCTCTGCACCGCTGCCACATCTATGGTACAGCCTGTGCTGACTGC
TGCCTGGCGCGGGACCCTTATTGCGCCTGGGATGGCCATTCCTGTTCCAGATTCTACCCA
ACTGGGAAACGGAGGAGCCGAAGACAAGATGTGAGACATGGAAACCCACTGACTCAATGC
AGAGGATTTAATCTAAAAGCATACAGAAATGCAGCTGAAATTGTGCAGTATGGAGTAAAA
AATAACACCACTTTTCTGGAGTGTGCCCCCAAGTCTCCGCAGGCATCTATCAAGTGGCTG
TTACAGAAAGACAAAGACAGGAGGAAAGAGGTTAAGCTGAATGAACGAATAATAGCCACT
TCACAGGGACTCCTGATCCGCTCTGTTCAGGGTTCTGACCAAGGACTTTATCACTGCATT
GCTACAGAAAATAGTTTCAAGCAGACCATAGCCAAGATCAACTTCAAAGTTTTAGATTCA
GAAATGGTGGCTGTTGTGACGGACAAATGGTCCCCGTGGACCTGGGCCAGCTCTGTGAGG
GCTTTACCCTTCCACCCGAAGGACATCATGGGGGCATTCAGCCACTCAGAAATGCAGATG
ATTAACCAATACTGCAAAGACACTCGGCAGCAACATCAGCAGGGAGATGAATCACAGAAA
ATGAGAGGGGACTATGGCAAGTTAAAGGCCCTCATCAATAGTCGGAAAAGTAGAAACAGG
AGGAATCAGTTGCCAGAGTCAGTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCTCTA
GAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGA
GTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAAACGGGT
CTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAAAAC
CGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGCGCT
TGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTT
CTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTT
GCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAG
CCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGATCA
AGATCTGATCAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAACAAGATGGATTGCAC
GCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAACAGACA
ATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTT
GTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTATCG
TGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCGGGA
AGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTTGCT
CCTGCCGAGAAAGTATCCATCATGGCTGATGCAATGCGGCGGCTGCATACGCTTGATCCG
GCTACCTGCCCATTCGACCACCAAGCGAAACATCGCATCGAGCGAGCACGCACTCGGATG
GAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCAGCC
GAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACTCAT
GGCGATGCCTGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATCGAC
TGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTGGCTACCCGTGATATT
GCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCCGCT
CCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGACTC
TGGGGTTCGAAATGACCGACCAAGCGACGCCCAACCGGACTATAAAAGGATCTAGGTGAA
GATCCTTTTTGATAATCTCATGACCAAAATCCCTTAACGTGAGTTTTCGTTCCACTGAGC
GTCAGACCCCGTAGAAAAGATCAAAGGATCTTCTTGAAATCCTTTTTTTCTGCGCGTAAT
CTGCTGCTTGCAAACAAAAAAACCACCGCTACCAGCGGTGGTTTGTTTGCCGGATCAAGA
GCTACCAACTCTTTTTCCGAAGGTAACTGGCTTCAGCAGAGCGCAGATACCAAATACTGT
CCTTCTAGTGTAGCCGTAGTTAGGCCACCACTTCAAGAACTCTGTAGCACCGCCTACATA
CCTCGCTCTGCTAATCCTGTTACCAGTGGCTGCTGCCAGTGGCGATAAGTCGTGTCTTAC
CGGGTTGGACTCAAGACGATAGTTACCGGATAAGGCGCAGCGGTCGGGCTGAACGGGGGG
TTCGTGCACACAGCCCAGCTTGGAGCGAACGACCTACACCGAACTGAGATACCTACAGCG
TGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAG
CGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCTGGTATCT
TTATAGTCCTGTCGGGTTTCGCCACCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTC
AGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTT
TTGCTGGCCTTTTGCTCACATGTTCTTTCCTGCGTTATCCCCTGATTCTGTGGATAACCG
TATTACCGCCTTTGAGTGAGCTGATACCGGAAATACAGGAACGCACGCTGGATGGCCCTT
CGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTG
GCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCG
GCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAAC
GCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCG
TAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGA
TCTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTT
GCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACG
CCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATC
AAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGG
TGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAAC
GGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGA
AGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTTTTCTAA
ATACATTCAAATATGTATCCGCTCAT