LRSAM1 ORF clone FXC01730

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Flexi ORF Clone FXC01730

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Clone info.

Species

human

Clone Name

pF1KB3300 Sequence (with vector) Restriction Map

Product ID

FXC01730

HaloTag Clone PID

FHC01730

Original Clone PID

ORK01730

ORF Sequence

DNA sequence (2169 bp)
Protein sequence (723 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB384779]

Gene

KIBB3300

Symbol

LRSAM1

Alias : CMT2P, RIFLE, TAL

Description

leucine rich repeat and sterile alpha motif containing 1, transcript variant 1

Original Clone ID

fk00416

Features of the cloned ORF sequence

Description

Length: 2169 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 723 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS6873.1 5e-115 99.7 LRSAM1 CCDS55347.1 7.5e-74 96.0 LRSAM1 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR001611 83 103 PF00560 Leucine-rich repeat IPR001611 151 167 PF00560 Leucine-rich repeat IPR011510 575 629 PF07647 Sterile alpha motif HMMSmart IPR003591 80 102 SM00369 Leucine-rich repeat NULL 80 99 SM00364 NULL IPR003591 103 125 SM00369 Leucine-rich repeat NULL 103 122 SM00364 NULL IPR003591 126 147 SM00369 Leucine-rich repeat NULL 126 145 SM00364 NULL IPR003591 149 171 SM00369 Leucine-rich repeat NULL 149 168 SM00364 NULL IPR001660 566 632 SM00454 Sterile alpha motif domain ProfileScan IPR001611 82 103 PS51450 Leucine-rich repeat IPR001611 105 127 PS51450 Leucine-rich repeat IPR001611 128 149 PS51450 Leucine-rich repeat IPR001611 151 172 PS51450 Leucine-rich repeat IPR001660 578 632 PS50105 Sterile alpha motif domain IPR001841 675 710 PS50089 Zinc finger
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) XP_016870772 723 610933,614436 99.7 100.0 NP_001005373 723 610933,614436 99.7 100.0 NP_001005374 723 610933,614436 99.7 100.0 NP_612370 723 610933,614436 99.7 100.0 XP_006717379 690 610933,614436 95.2 100.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB3300 Download

>KIBB3300  2169 bp
ATGCCGCTCTTCTTCCGGAAGCGGAAACCCAGTGAGGAGGCTCGGAAACGCCTGGAGTAC
CAGATGTGTTTGGCAAAAGAAGCTGGGGCAGATGACATTCTCGACATCTCTAAATGTGAG
CTCTCAGAGATTCCATTTGGAGCTTTTGCAACATGCAAAGTTCTGCAGAAGAAGGTGCTG
ATCGTCCACACGAATCACCTCACTTCCCTGCTTCCCAAATCCTGCAGCCTCCTGAGTCTG
GCAACCATCAAGGTTCTAGATCTCCACGATAATCAGCTGACAGCCCTTCCTGACGATCTG
GGGCAGCTGACTGCCCTCCAGGTCTTAAACGTGGAAAGGAATCAACTGATGCAGCTCCCA
CGTTCCATTGGGAACCTGACCCAGCTCCAGACTCTCAATGTTAAAGACAACAAGCTGAAG
GAGCTTCCAGACACCGTGGGGGAGCTTCGAAGCCTGCGTACCCTCAACATCAGTGGAAAC
GAGATCCAGAGATTGCCGCAGATGCTGGCTCACGTTCGAACCCTGGAGATGCTGAGCCTT
GACGCCTCGGCCATGGTCTACCCGCCGCGGGAGGTGTGTGGTGCCGGCACTGCGGCCATC
TTGCAGTTCCTCTGCAAAGAGTCAGGGCTGGAATACTACCCCCCTTCTCAGTACTTGCTG
CCAATTCTGGAGCAAGATGGAATCGAGAACTCTCGGGACAGCCCTGATGGGCCCACGGAC
AGATTCTCAAGGGAGGAGTTAGAGTGGCAGAACAGGTTCTCAGACTATGAGAAGAGGAAG
GAACAGAAGATGCTGGAGAAACTCGAGTTTGAACGGCGCCTGGAACTGGGGCAGCGGGAG
CACACCCAGCTCCTTCAGCAGAGCAGCAGCCAGAAGGATGAGATCCTTCAGACGGTCAAG
GAGGAGCAGTCCCGGCTGGAGCAGGGCCTGAGTGAGCACCAGCGCCACCTCGACGCAGAG
CGGCGGCGGCTGCAGGAGCAGCTGAAGCAGACGGAACAGAACATTTCCAGCCGGATCCAG
AAGCTGCTGCAGGACAATCAGAGACAAAAGAAAAGCTCCGAGATTTTGAAATCGCTGGAA
AATGAAAGAATAAGAATGGAACAGTTGATGTCCATAACCCAGGAGGAGACTGAGAGCCTG
CGGCGACGTGACGTTGCCTCCGCCATGCAGCAGATGCTGACTGAGAGCTGTAAGAACCGG
CTCATCCAGATGGCCTACGAATCTCAGAGGCAGAACTTGGTCCAGCAGGCCTGTTCCAGC
ATGGCCGAAATGGATGAACGATTCCAGCAGATTCTGTCGTGGCAGCAAATGGATCAGAAC
AAAGCCATCAGCCAGATCCTGCAGGAGAGCGCGATGCAGAAGGCTGCGTTCGAGGCACTC
CAGGTGAAGAAAGACCTGATGCATCGGCAGATCAGGAGCCAGATTAAGTTAATAGAAACT
GAGTTATTGCAGCTGACACAGCTGGAGTTAAAGAGGAAGTCCCTGGACACAGAGTCACTC
CAGGAGATGATCTCGGAGCAGCGCTGGGCCCTCAGCTCCCTGCTCCAGCAGCTGCTCAAA
GAGAAGCAGCAGCGAGAGGAAGAGCTCCGGGAAATCCTGACGGAGTTAGAAGCCAAAAGT
GAAACCAGGCAGGAAAATTACTGGCTGATTCAGTATCAACGGCTTTTGAACCAGAAGCCC
TTGTCCTTGAAGCTGCAAGAAGAGGGGATGGAGCGCCAGCTGGTGGCCCTCCTGGAGGAG
CTGTCGGCTGAGCACTACCTGCCCATCTTTGCGCACCACCGCCTCTCACTGGACCTGCTG
AGCCAAATGAGCCCAGGGGACCTGGCCAAGGTGGGCGTCTCAGAAGCTGGCCTGCAGCAC
GAGATCCTCCGGAGAGTCCAGGAACTGCTGGATGCAGCCAGGATCCAGCCAGAGCTGAAA
CCACCAATGGGTGAGGTCGTCACCCCTACGGCCCCCCAGGAGCCTCCTGAGTCTGTGAGG
CCATCCGCTCCCCCTGCAGAGCTGGAGGTGCAGGCCTCAGAGTGTGTCGTGTGCCTGGAA
CGGGAGGCCCAGATGATCTTCCTCAACTGTGGCCACGTCTGCTGCTGCCAGCAGTGCTGC
CAGCCACTGCGCACCTGCCCGCTGTGCCGCCAGGACATCGCCCAGCGCCTCCGCATCTAC
CACAGCAGC

ORF Protein

Cloned ORF protein sequence for pF1KB3300 Download

>KIBB3300  723 aa
MPLFFRKRKPSEEARKRLEYQMCLAKEAGADDILDISKCELSEIPFGAFATCKVLQKKVL
IVHTNHLTSLLPKSCSLLSLATIKVLDLHDNQLTALPDDLGQLTALQVLNVERNQLMQLP
RSIGNLTQLQTLNVKDNKLKELPDTVGELRSLRTLNISGNEIQRLPQMLAHVRTLEMLSL
DASAMVYPPREVCGAGTAAILQFLCKESGLEYYPPSQYLLPILEQDGIENSRDSPDGPTD
RFSREELEWQNRFSDYEKRKEQKMLEKLEFERRLELGQREHTQLLQQSSSQKDEILQTVK
EEQSRLEQGLSEHQRHLDAERRRLQEQLKQTEQNISSRIQKLLQDNQRQKKSSEILKSLE
NERIRMEQLMSITQEETESLRRRDVASAMQQMLTESCKNRLIQMAYESQRQNLVQQACSS
MAEMDERFQQILSWQQMDQNKAISQILQESAMQKAAFEALQVKKDLMHRQIRSQIKLIET
ELLQLTQLELKRKSLDTESLQEMISEQRWALSSLLQQLLKEKQQREEELREILTELEAKS
ETRQENYWLIQYQRLLNQKPLSLKLQEEGMERQLVALLEELSAEHYLPIFAHHRLSLDLL
SQMSPGDLAKVGVSEAGLQHEILRRVQELLDAARIQPELKPPMGEVVTPTAPQEPPESVR
PSAPPAELEVQASECVVCLEREAQMIFLNCGHVCCCQQCCQPLRTCPLCRQDIAQRLRIY
HSS

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB3300 Download

>pF1KB3300  5282 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGCCGCTCTTC
TTCCGGAAGCGGAAACCCAGTGAGGAGGCTCGGAAACGCCTGGAGTACCAGATGTGTTTG
GCAAAAGAAGCTGGGGCAGATGACATTCTCGACATCTCTAAATGTGAGCTCTCAGAGATT
CCATTTGGAGCTTTTGCAACATGCAAAGTTCTGCAGAAGAAGGTGCTGATCGTCCACACG
AATCACCTCACTTCCCTGCTTCCCAAATCCTGCAGCCTCCTGAGTCTGGCAACCATCAAG
GTTCTAGATCTCCACGATAATCAGCTGACAGCCCTTCCTGACGATCTGGGGCAGCTGACT
GCCCTCCAGGTCTTAAACGTGGAAAGGAATCAACTGATGCAGCTCCCACGTTCCATTGGG
AACCTGACCCAGCTCCAGACTCTCAATGTTAAAGACAACAAGCTGAAGGAGCTTCCAGAC
ACCGTGGGGGAGCTTCGAAGCCTGCGTACCCTCAACATCAGTGGAAACGAGATCCAGAGA
TTGCCGCAGATGCTGGCTCACGTTCGAACCCTGGAGATGCTGAGCCTTGACGCCTCGGCC
ATGGTCTACCCGCCGCGGGAGGTGTGTGGTGCCGGCACTGCGGCCATCTTGCAGTTCCTC
TGCAAAGAGTCAGGGCTGGAATACTACCCCCCTTCTCAGTACTTGCTGCCAATTCTGGAG
CAAGATGGAATCGAGAACTCTCGGGACAGCCCTGATGGGCCCACGGACAGATTCTCAAGG
GAGGAGTTAGAGTGGCAGAACAGGTTCTCAGACTATGAGAAGAGGAAGGAACAGAAGATG
CTGGAGAAACTCGAGTTTGAACGGCGCCTGGAACTGGGGCAGCGGGAGCACACCCAGCTC
CTTCAGCAGAGCAGCAGCCAGAAGGATGAGATCCTTCAGACGGTCAAGGAGGAGCAGTCC
CGGCTGGAGCAGGGCCTGAGTGAGCACCAGCGCCACCTCGACGCAGAGCGGCGGCGGCTG
CAGGAGCAGCTGAAGCAGACGGAACAGAACATTTCCAGCCGGATCCAGAAGCTGCTGCAG
GACAATCAGAGACAAAAGAAAAGCTCCGAGATTTTGAAATCGCTGGAAAATGAAAGAATA
AGAATGGAACAGTTGATGTCCATAACCCAGGAGGAGACTGAGAGCCTGCGGCGACGTGAC
GTTGCCTCCGCCATGCAGCAGATGCTGACTGAGAGCTGTAAGAACCGGCTCATCCAGATG
GCCTACGAATCTCAGAGGCAGAACTTGGTCCAGCAGGCCTGTTCCAGCATGGCCGAAATG
GATGAACGATTCCAGCAGATTCTGTCGTGGCAGCAAATGGATCAGAACAAAGCCATCAGC
CAGATCCTGCAGGAGAGCGCGATGCAGAAGGCTGCGTTCGAGGCACTCCAGGTGAAGAAA
GACCTGATGCATCGGCAGATCAGGAGCCAGATTAAGTTAATAGAAACTGAGTTATTGCAG
CTGACACAGCTGGAGTTAAAGAGGAAGTCCCTGGACACAGAGTCACTCCAGGAGATGATC
TCGGAGCAGCGCTGGGCCCTCAGCTCCCTGCTCCAGCAGCTGCTCAAAGAGAAGCAGCAG
CGAGAGGAAGAGCTCCGGGAAATCCTGACGGAGTTAGAAGCCAAAAGTGAAACCAGGCAG
GAAAATTACTGGCTGATTCAGTATCAACGGCTTTTGAACCAGAAGCCCTTGTCCTTGAAG
CTGCAAGAAGAGGGGATGGAGCGCCAGCTGGTGGCCCTCCTGGAGGAGCTGTCGGCTGAG
CACTACCTGCCCATCTTTGCGCACCACCGCCTCTCACTGGACCTGCTGAGCCAAATGAGC
CCAGGGGACCTGGCCAAGGTGGGCGTCTCAGAAGCTGGCCTGCAGCACGAGATCCTCCGG
AGAGTCCAGGAACTGCTGGATGCAGCCAGGATCCAGCCAGAGCTGAAACCACCAATGGGT
GAGGTCGTCACCCCTACGGCCCCCCAGGAGCCTCCTGAGTCTGTGAGGCCATCCGCTCCC
CCTGCAGAGCTGGAGGTGCAGGCCTCAGAGTGTGTCGTGTGCCTGGAACGGGAGGCCCAG
ATGATCTTCCTCAACTGTGGCCACGTCTGCTGCTGCCAGCAGTGCTGCCAGCCACTGCGC
ACCTGCCCGCTGTGCCGCCAGGACATCGCCCAGCGCCTCCGCATCTACCACAGCAGCGTT
TAAACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGC
TGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCA
ATAACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGG
AGGAACTATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGT
AAGCCCACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGC
CCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTT
CCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAA
TTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCT
TTCTTGCCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGATGA
CGGTCGTTTCGCATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTG
GAGAGGCTATTCGGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCCGCCGTG
TTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCC
CTGAATGAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCT
TGCGCAGCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAA
GTGCCGGGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATG
GCTGATGCAATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGACCACCAA
GCGAAACATCGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGAT
GATCTGGACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCG
CGTATGCCGGATGGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAATATC
ATGGTGGAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGAC
CGCTATCAGGACATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGG
GCTGACCGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTC
TATCGCCTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAG
CGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGG
GGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAA
GGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCG
ACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCC
TGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGC
CTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTC
GGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCG
CTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCC
ACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGA
GTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGC
TCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAAC
CACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGG
ATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTC
ACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATA
GTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAA
AATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGG
TATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGC
CATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTA
AGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTA
CTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACAGATTAA
ATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGT
CCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGG
GTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGA
AAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAA
ATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGAC
GCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTT
TTGCGTTTCTACAAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTC
AT