PATZ1 ORF clone FXC01717

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Flexi ORF Clone FXC01717

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Clone info.

Species

human

Clone Name

pF1KB3020 Sequence (with vector) Restriction Map

Product ID

FXC01717

HaloTag Clone PID

FHC01717

ORF Sequence

DNA sequence (1923 bp)
Protein sequence (641 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB384725]

Gene

KIBB3020

Symbol

PATZ1

Alias : MAZR, PATZ, RIAZ, ZBTB19, ZNF278, ZSG, dJ400N23

Description

POZ (BTB) and AT hook containing zinc finger 1, transcript variant 2

Original Clone ID

ha03335

Features of the cloned ORF sequence

Description

Length: 1923 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 641 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS13895.1 1.5e-137 99.8 PATZ1 CCDS46691.1 9.9e-107 95.5 PATZ1 CCDS13894.1 1.2e-106 93.0 PATZ1 CCDS13896.1 3.2e-93 99.8 PATZ1 CCDS61902.1 4e-23 40.7 MAZ The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR013069 30 159 PF00651 BTB/POZ IPR007087 413 436 PF00096 Zinc finger IPR007087 559 582 PF00096 Zinc finger HMMSmart IPR000210 41 160 SM00225 BTB/POZ-like IPR015880 292 314 SM00355 Zinc finger IPR015880 355 377 SM00355 Zinc finger IPR015880 383 405 SM00355 Zinc finger IPR015880 413 436 SM00355 Zinc finger IPR015880 442 464 SM00355 Zinc finger IPR015880 468 489 SM00355 Zinc finger IPR015880 559 582 SM00355 Zinc finger ProfileScan IPR000210 41 130 PS50097 BTB/POZ-like IPR007087 292 314 PS50157 Zinc finger IPR007087 355 382 PS50157 Zinc finger IPR007087 383 410 PS50157 Zinc finger IPR007087 413 441 PS50157 Zinc finger IPR007087 442 469 PS50157 Zinc finger IPR007087 559 582 PS50157 Zinc finger
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_114439 641 605165 99.8 100.0 NP_114441 537 605165 95.5 83.0 NP_055138 687 605165 93.0 97.8 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB3020 Download

>KIBB3020  1923 bp
ATGGAGCGGGTGAACGACGCTTCGTGCGGCCCGTCTGGCTGCTACACATACCAGGTGAGC
AGACACAGCACGGAGATGCTGCACAACCTGAACCAGCAGCGCAAAAACGGCGGGCGCTTC
TGCGACGTGCTCTTGCGGGTAGGCGACGAGAGCTTCCCAGCGCACCGCGCCGTGCTGGCC
GCCTGCAGCGAGTACTTTGAGTCGGTGTTCAGCGCCCAGTTGGGCGACGGCGGAGCTGCG
GACGGGGGTCCGGCTGATGTAGGGGGCGCGACGGCAGCACCAGGCGGCGGGGCCGGGGGC
AGCCGGGAGCTGGAGATGCACACTATCAGCTCCAAGGTATTTGGGGACATTCTGGACTTC
GCCTACACTTCCCGCATCGTGGTGCGCTTGGAGAGCTTTCCCGAACTCATGACGGCCGCC
AAGTTCCTGCTGATGAGGTCGGTTATCGAGATCTGCCAGGAAGTCATCAAACAGTCCAAC
GTACAGATCCTGGTACCCCCTGCCCGCGCCGATATAATGCTCTTTCGCCCCCCTGGGACC
TCGGACTTGGGCTTCCCTTTGGACATGACCAACGGGGCAGCCTTGGCAGCCAACAGCAAT
GGCATCGCCGGCAGCATGCAGCCAGAGGAGGAGGCAGCTCGGGCGGCTGGTGCAGCCATT
GCAGGCCAAGCCTCTTTGCCTGTGTTACCTGGGGTGGACCGCTTGCCCATGGTGGCTGGA
CCCCTATCCCCCCAACTGCTGACTTCCCCATTCCCCAGTGTGGCATCCAGTGCCCCTCCC
CTGACTGGCAAGCGAGGCCGGGGCCGCCCAAGGAAGGCCAACCTGCTGGACTCAATGTTT
GGGTCCCCAGGGGGCCTGAGGGAGGCAGGCACCCTTCCATGCGGTCTATGTGGTAAGGTG
TTCACTGATGCCAACCGGCTCCGGCAGCACGAGGCCCAGCACGGTGTCACCAGCCTCCAG
CTGGGCTACATCGACCTTCCTCCTCCGAGGCTGGGTGAGAATGGGCTACCCATCTCTGAA
GACCCCGACGGCCCCCGAAAGAGGAGCCGGACCAGGAAGCAGGTGGCTTGTGAGATCTGC
GGCAAGATCTTCCGTGATGTGTATCATCTTAACCGGCACAAGCTGTCCCACTCTGGGGAG
AAGCCCTACTCCTGCCCTGTGTGTGGGTTGCGGTTCAAGAGAAAAGACCGCATGTCCTAC
CATGTGCGGTCCCATGATGGGTCCGTGGGCAAGCCTTACATCTGCCAGAGCTGTGGGAAA
GGCTTCTCCAGGCCTGATCACTTGAACGGACATATCAAGCAGGTGCACACTTCTGAGCGG
CCTCACAAGTGTCAGACCTGCAATGCTTCTTTTGCCACCCGAGACCGTCTGCGCTCCCAC
CTGGCCTGTCATGAAGACAAGGTGCCCTGCCAGGTGTGTGGGAAGTACTTGCGGGCAGCA
TACATGGCAGACCACCTGAAGAAGCACAGCGAGGGGCCCAGCAACTTCTGCAGTATCTGT
AACCGAGAAGGCCAGAAATGCTCACATCAGGATCCGATTGAGAGCTCTGACTCCTATGGT
GACCTCTCAGATGCCAGCGACCTGAAGACGCCAGAGAAGCAGAGTGCCAATGGCTCTTTC
TCCTGCGACATGGCAGTCCCCAAAAACAAAATGGAGTCTGATGGGGAGAAGAAGTACCCA
TGCCCTGAATGTGGGAGCTTCTTCCGCTCTAAGTCCTACTTGAACAAACACATCCAGAAG
GTGCATGTCCGGGCTCTCGGGGGCCCCCTGGGGGACCTGGGCCCTGCCCTTGGCTCACCT
TTCTCTCCTCAGCAGAACATGTCTCTCCTCGAGTCCTTTGGGTTTCAGATTGTTCAGTCG
GCATTTGCGTCATCTTTAGTAGATCCTGAGGTTGACCAGCAGCCCATGGGGCCTGAAGGG
AAA

ORF Protein

Cloned ORF protein sequence for pF1KB3020 Download

>KIBB3020  641 aa
MERVNDASCGPSGCYTYQVSRHSTEMLHNLNQQRKNGGRFCDVLLRVGDESFPAHRAVLA
ACSEYFESVFSAQLGDGGAADGGPADVGGATAAPGGGAGGSRELEMHTISSKVFGDILDF
AYTSRIVVRLESFPELMTAAKFLLMRSVIEICQEVIKQSNVQILVPPARADIMLFRPPGT
SDLGFPLDMTNGAALAANSNGIAGSMQPEEEAARAAGAAIAGQASLPVLPGVDRLPMVAG
PLSPQLLTSPFPSVASSAPPLTGKRGRGRPRKANLLDSMFGSPGGLREAGTLPCGLCGKV
FTDANRLRQHEAQHGVTSLQLGYIDLPPPRLGENGLPISEDPDGPRKRSRTRKQVACEIC
GKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGK
GFSRPDHLNGHIKQVHTSERPHKCQTCNASFATRDRLRSHLACHEDKVPCQVCGKYLRAA
YMADHLKKHSEGPSNFCSICNREGQKCSHQDPIESSDSYGDLSDASDLKTPEKQSANGSF
SCDMAVPKNKMESDGEKKYPCPECGSFFRSKSYLNKHIQKVHVRALGGPLGDLGPALGSP
FSPQQNMSLLESFGFQIVQSAFASSLVDPEVDQQPMGPEGK

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB3020 Download

>pF1KB3020  5036 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGGAGCGGGTG
AACGACGCTTCGTGCGGCCCGTCTGGCTGCTACACATACCAGGTGAGCAGACACAGCACG
GAGATGCTGCACAACCTGAACCAGCAGCGCAAAAACGGCGGGCGCTTCTGCGACGTGCTC
TTGCGGGTAGGCGACGAGAGCTTCCCAGCGCACCGCGCCGTGCTGGCCGCCTGCAGCGAG
TACTTTGAGTCGGTGTTCAGCGCCCAGTTGGGCGACGGCGGAGCTGCGGACGGGGGTCCG
GCTGATGTAGGGGGCGCGACGGCAGCACCAGGCGGCGGGGCCGGGGGCAGCCGGGAGCTG
GAGATGCACACTATCAGCTCCAAGGTATTTGGGGACATTCTGGACTTCGCCTACACTTCC
CGCATCGTGGTGCGCTTGGAGAGCTTTCCCGAACTCATGACGGCCGCCAAGTTCCTGCTG
ATGAGGTCGGTTATCGAGATCTGCCAGGAAGTCATCAAACAGTCCAACGTACAGATCCTG
GTACCCCCTGCCCGCGCCGATATAATGCTCTTTCGCCCCCCTGGGACCTCGGACTTGGGC
TTCCCTTTGGACATGACCAACGGGGCAGCCTTGGCAGCCAACAGCAATGGCATCGCCGGC
AGCATGCAGCCAGAGGAGGAGGCAGCTCGGGCGGCTGGTGCAGCCATTGCAGGCCAAGCC
TCTTTGCCTGTGTTACCTGGGGTGGACCGCTTGCCCATGGTGGCTGGACCCCTATCCCCC
CAACTGCTGACTTCCCCATTCCCCAGTGTGGCATCCAGTGCCCCTCCCCTGACTGGCAAG
CGAGGCCGGGGCCGCCCAAGGAAGGCCAACCTGCTGGACTCAATGTTTGGGTCCCCAGGG
GGCCTGAGGGAGGCAGGCACCCTTCCATGCGGTCTATGTGGTAAGGTGTTCACTGATGCC
AACCGGCTCCGGCAGCACGAGGCCCAGCACGGTGTCACCAGCCTCCAGCTGGGCTACATC
GACCTTCCTCCTCCGAGGCTGGGTGAGAATGGGCTACCCATCTCTGAAGACCCCGACGGC
CCCCGAAAGAGGAGCCGGACCAGGAAGCAGGTGGCTTGTGAGATCTGCGGCAAGATCTTC
CGTGATGTGTATCATCTTAACCGGCACAAGCTGTCCCACTCTGGGGAGAAGCCCTACTCC
TGCCCTGTGTGTGGGTTGCGGTTCAAGAGAAAAGACCGCATGTCCTACCATGTGCGGTCC
CATGATGGGTCCGTGGGCAAGCCTTACATCTGCCAGAGCTGTGGGAAAGGCTTCTCCAGG
CCTGATCACTTGAACGGACATATCAAGCAGGTGCACACTTCTGAGCGGCCTCACAAGTGT
CAGACCTGCAATGCTTCTTTTGCCACCCGAGACCGTCTGCGCTCCCACCTGGCCTGTCAT
GAAGACAAGGTGCCCTGCCAGGTGTGTGGGAAGTACTTGCGGGCAGCATACATGGCAGAC
CACCTGAAGAAGCACAGCGAGGGGCCCAGCAACTTCTGCAGTATCTGTAACCGAGAAGGC
CAGAAATGCTCACATCAGGATCCGATTGAGAGCTCTGACTCCTATGGTGACCTCTCAGAT
GCCAGCGACCTGAAGACGCCAGAGAAGCAGAGTGCCAATGGCTCTTTCTCCTGCGACATG
GCAGTCCCCAAAAACAAAATGGAGTCTGATGGGGAGAAGAAGTACCCATGCCCTGAATGT
GGGAGCTTCTTCCGCTCTAAGTCCTACTTGAACAAACACATCCAGAAGGTGCATGTCCGG
GCTCTCGGGGGCCCCCTGGGGGACCTGGGCCCTGCCCTTGGCTCACCTTTCTCTCCTCAG
CAGAACATGTCTCTCCTCGAGTCCTTTGGGTTTCAGATTGTTCAGTCGGCATTTGCGTCA
TCTTTAGTAGATCCTGAGGTTGACCAGCAGCCCATGGGGCCTGAAGGGAAAGTTTAAACG
AATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCC
GGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACT
AGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAAC
TATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCC
ACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTA
GCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTT
CCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCA
GCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTG
CCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGGTCG
TTTCGCATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGG
CTATTCGGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGG
CTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAAT
GAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCA
GCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCG
GGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGAT
GCAATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCGAAA
CATCGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTG
GACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATG
CCGGATGGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATGGTG
GAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTAT
CAGGACATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGAC
CGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGC
CTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGACGC
CCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAA
CGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGC
GTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTC
AAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAG
CTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCT
CCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTA
GGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGC
CTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGC
AGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTT
GAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCT
GAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGC
TGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCA
AGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTA
AGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGG
AAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGC
AGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCA
TACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTT
TACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGAT
TATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGG
CCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAATCAGA
ACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACC
TGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCC
CCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACT
GGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGC
CGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGC
CATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGT
TTCTACAAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCAT