TRIM23 ORF clone FXC01430

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Flexi ORF Clone FXC01430

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Clone info.

Species

human

Clone Name

pF1KB4702 Sequence (with vector) Restriction Map

Product ID

FXC01430

HaloTag Clone PID

FHC01430

ORF Sequence

DNA sequence (1722 bp)
Protein sequence (574 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1KOF Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB384982]

Gene

KIBB4702

Symbol

TRIM23

Alias : ARD1, ARFD1, RNF46

Description

tripartite motif containing 23, transcript variant alpha

Original Clone ID

fk14923

Features of the cloned ORF sequence

Description

Length: 1722 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 574 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS3987.1 5.9e-111 100.0 TRIM23 CCDS43322.1 3.1e-106 100.0 TRIM23 CCDS3986.1 7.9e-104 100.0 TRIM23 CCDS1565.1 1.9e-16 62.8 ARF1 CCDS8774.1 2.2e-16 62.3 ARF3 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR006689 406 429 PR00328 ARF/SAR superfamily IPR006689 434 458 PR00328 ARF/SAR superfamily IPR006689 461 486 PR00328 ARF/SAR superfamily IPR006689 506 527 PR00328 ARF/SAR superfamily HMMPfam IPR000315 125 168 PF00643 Zinc finger IPR006689 395 564 PF00025 ARF/SAR superfamily HMMSmart IPR001841 31 75 SM00184 Zinc finger IPR000315 122 168 SM00336 Zinc finger IPR000315 173 219 SM00336 Zinc finger IPR003649 226 370 SM00502 B-box IPR006688 387 569 SM00177 ADP-ribosylation factor IPR006687 389 565 SM00178 Small GTPase SAR1-type IPR003579 405 572 SM00175 Ras small GTPase HMMTigr IPR005225 404 531 TIGR00231 Small GTP-binding protein domain ProfileScan IPR001841 31 76 PS50089 Zinc finger IPR000315 122 168 PS50119 Zinc finger IPR007087 145 172 PS50157 Zinc finger IPR006689 398 565 PS51417 ARF/SAR superfamily
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_001647 574 601747 100.0 100.0 XP_016864933 569 601747 100.0 95.8 NP_150230 569 601747 100.0 95.8 NP_150231 546 601747 100.0 94.1 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB4702 Download

>KIBB4702  1722 bp
ATGGCTACCCTGGTTGTAAACAAGCTCGGAGCGGGAGTAGACAGTGGCCGGCAGGGCAGC
CGGGGGACAGCTGTAGTGAAGGTGCTAGAGTGTGGAGTTTGTGAAGATGTCTTTTCTTTG
CAAGGAGACAAAGTTCCCCGTCTTTTGCTTTGTGGCCATACCGTCTGTCATGACTGTCTC
ACTCGCCTACCTCTTCATGGAAGAGCAATCCGTTGCCCATTTGATCGACAAGTAACAGAC
CTAGGTGATTCAGGTGTCTGGGGATTGAAAAAAAATTTTGCTTTATTGGAGCTTTTGGAA
CGACTGCAGAATGGGCCTATTGGTCAGTATGGAGCTGCAGAAGAATCCATTGGGATATCT
GGAGAGAGCATCATTCGTTGTGATGAAGATGAAGCTCACCTTGCCTCTGTATATTGCACT
GTGTGTGCAACTCATTTGTGCTCTGAGTGTTCTCAAGTTACTCATTCTACAAAGACATTA
GCAAAGCACAGGCGAGTTCCTCTAGCTGATAAACCTCATGAGAAAACTATGTGCTCTCAG
CACCAGGTGCATGCCATTGAGTTTGTTTGCTTGGAAGAAGGTTGTCAAACTAGCCCACTC
ATGTGCTGTGTCTGCAAAGAATATGGAAAACACCAGGGTCACAAGCATTCAGTATTGGAA
CCAGAAGCTAATCAGATCCGAGCATCAATTTTAGATATGGCTCACTGCATACGGACCTTC
ACAGAGGAAATCTCAGATTATTCCAGAAAATTAGTTGGAATTGTGCAGCACATTGAAGGA
GGAGAACAAATCGTGGAAGATGGAATTGGAATGGCTCACACAGAACATGTACCAGGGACT
GCAGAGAATGCCCGGTCATGTATTCGAGCTTATTTTTATGATCTACATGAAACTCTGTGT
CGTCAAGAAGAAATGGCTCTAAGTGTTGTTGATGCTCATGTTCGTGAAAAATTGATTTGG
CTCAGGCAGCAACAAGAAGATATGACTATTTTGTTGTCAGAGGTTTCTGCAGCCTGCCTC
CACTGTGAAAAGACTTTGCAGCAGGATGATTGTAGAGTTGTCTTGGCAAAACAGGAAATT
ACAAGGTTACTGGAAACATTGCAGAAACAGCAGCAGCAGTTTACAGAAGTTGCAGATCAC
ATTCAGTTGGATGCCAGCATCCCTGTCACTTTTACAAAGGATAATCGAGTTCACATTGGA
CCAAAAATGGAAATTCGGGTCGTTACGTTAGGATTGGATGGTGCTGGAAAAACTACTATC
TTGTTTAAGTTAAAACAGGATGAATTCATGCAGCCCATTCCAACAATTGGTTTTAACGTG
GAAACTGTAGAATATAAAAATCTAAAATTCACTATTTGGGATGTAGGTGGAAAACACAAA
TTAAGACCATTGTGGAAACATTATTACCTCAATACTCAAGCTGTTGTGTTTGTTGTAGAT
AGCAGTCATAGAGACAGAATTAGTGAAGCACACAGCGAACTTGCAAAGTTGTTAACGGAA
AAAGAACTCCGAGATGCTCTGCTCCTGATTTTTGCTAACAAACAGGATGTTGCTGGAGCA
CTGTCAGTAGAAGAAATCACTGAACTACTCAGTCTCCATAAATTATGCTGTGGCCGTAGC
TGGTATATTCAGGGCTGTGATGCTCGAAGTGGTATGGGACTGTATGAAGGGTTGGACTGG
CTCTCACGGCAACTTGTAGCTGCTGGAGTATTGGATGTTGCT

ORF Protein

Cloned ORF protein sequence for pF1KB4702 Download

>KIBB4702  574 aa
MATLVVNKLGAGVDSGRQGSRGTAVVKVLECGVCEDVFSLQGDKVPRLLLCGHTVCHDCL
TRLPLHGRAIRCPFDRQVTDLGDSGVWGLKKNFALLELLERLQNGPIGQYGAAEESIGIS
GESIIRCDEDEAHLASVYCTVCATHLCSECSQVTHSTKTLAKHRRVPLADKPHEKTMCSQ
HQVHAIEFVCLEEGCQTSPLMCCVCKEYGKHQGHKHSVLEPEANQIRASILDMAHCIRTF
TEEISDYSRKLVGIVQHIEGGEQIVEDGIGMAHTEHVPGTAENARSCIRAYFYDLHETLC
RQEEMALSVVDAHVREKLIWLRQQQEDMTILLSEVSAACLHCEKTLQQDDCRVVLAKQEI
TRLLETLQKQQQQFTEVADHIQLDASIPVTFTKDNRVHIGPKMEIRVVTLGLDGAGKTTI
LFKLKQDEFMQPIPTIGFNVETVEYKNLKFTIWDVGGKHKLRPLWKHYYLNTQAVVFVVD
SSHRDRISEAHSELAKLLTEKELRDALLLIFANKQDVAGALSVEEITELLSLHKLCCGRS
WYIQGCDARSGMGLYEGLDWLSRQLVAAGVLDVA

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB4702 Download

>pF1KB4702  4835 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGGCTACCCTG
GTTGTAAACAAGCTCGGAGCGGGAGTAGACAGTGGCCGGCAGGGCAGCCGGGGGACAGCT
GTAGTGAAGGTGCTAGAGTGTGGAGTTTGTGAAGATGTCTTTTCTTTGCAAGGAGACAAA
GTTCCCCGTCTTTTGCTTTGTGGCCATACCGTCTGTCATGACTGTCTCACTCGCCTACCT
CTTCATGGAAGAGCAATCCGTTGCCCATTTGATCGACAAGTAACAGACCTAGGTGATTCA
GGTGTCTGGGGATTGAAAAAAAATTTTGCTTTATTGGAGCTTTTGGAACGACTGCAGAAT
GGGCCTATTGGTCAGTATGGAGCTGCAGAAGAATCCATTGGGATATCTGGAGAGAGCATC
ATTCGTTGTGATGAAGATGAAGCTCACCTTGCCTCTGTATATTGCACTGTGTGTGCAACT
CATTTGTGCTCTGAGTGTTCTCAAGTTACTCATTCTACAAAGACATTAGCAAAGCACAGG
CGAGTTCCTCTAGCTGATAAACCTCATGAGAAAACTATGTGCTCTCAGCACCAGGTGCAT
GCCATTGAGTTTGTTTGCTTGGAAGAAGGTTGTCAAACTAGCCCACTCATGTGCTGTGTC
TGCAAAGAATATGGAAAACACCAGGGTCACAAGCATTCAGTATTGGAACCAGAAGCTAAT
CAGATCCGAGCATCAATTTTAGATATGGCTCACTGCATACGGACCTTCACAGAGGAAATC
TCAGATTATTCCAGAAAATTAGTTGGAATTGTGCAGCACATTGAAGGAGGAGAACAAATC
GTGGAAGATGGAATTGGAATGGCTCACACAGAACATGTACCAGGGACTGCAGAGAATGCC
CGGTCATGTATTCGAGCTTATTTTTATGATCTACATGAAACTCTGTGTCGTCAAGAAGAA
ATGGCTCTAAGTGTTGTTGATGCTCATGTTCGTGAAAAATTGATTTGGCTCAGGCAGCAA
CAAGAAGATATGACTATTTTGTTGTCAGAGGTTTCTGCAGCCTGCCTCCACTGTGAAAAG
ACTTTGCAGCAGGATGATTGTAGAGTTGTCTTGGCAAAACAGGAAATTACAAGGTTACTG
GAAACATTGCAGAAACAGCAGCAGCAGTTTACAGAAGTTGCAGATCACATTCAGTTGGAT
GCCAGCATCCCTGTCACTTTTACAAAGGATAATCGAGTTCACATTGGACCAAAAATGGAA
ATTCGGGTCGTTACGTTAGGATTGGATGGTGCTGGAAAAACTACTATCTTGTTTAAGTTA
AAACAGGATGAATTCATGCAGCCCATTCCAACAATTGGTTTTAACGTGGAAACTGTAGAA
TATAAAAATCTAAAATTCACTATTTGGGATGTAGGTGGAAAACACAAATTAAGACCATTG
TGGAAACATTATTACCTCAATACTCAAGCTGTTGTGTTTGTTGTAGATAGCAGTCATAGA
GACAGAATTAGTGAAGCACACAGCGAACTTGCAAAGTTGTTAACGGAAAAAGAACTCCGA
GATGCTCTGCTCCTGATTTTTGCTAACAAACAGGATGTTGCTGGAGCACTGTCAGTAGAA
GAAATCACTGAACTACTCAGTCTCCATAAATTATGCTGTGGCCGTAGCTGGTATATTCAG
GGCTGTGATGCTCGAAGTGGTATGGGACTGTATGAAGGGTTGGACTGGCTCTCACGGCAA
CTTGTAGCTGCTGGAGTATTGGATGTTGCTGTTTAAACGAATTCGAGCTCGGTACCCGGG
GATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAA
GGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCCTC
TAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCTTGCTGT
CCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTGCTTTCT
CTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCA
GCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCC
TGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAG
GTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGATGGCGC
AGGGGATCAAGATCTGATCAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAACAAGAT
GGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGACTGGGCA
CAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCG
GTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAGGCAGCG
CGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTCACT
GAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCATCT
CACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCAATGCGGCGGCTGCATACG
CTTGATCCGGCTACCTGCCCATTCGACCACCAAGCGAAACATCGCATCGAGCGAGCACGC
ACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAGCATCAGGGGCTC
GCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGATCTCGTC
GTGACTCATGGCGATGCCTGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTTTCTGGA
TTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTGGCTACC
CGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTTTACGGT
ATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTCTTCTGA
GCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCAACCGGACTATAAAAGGAT
CTAGGTGAAGATCCTTTTTGATAATCTCATGACCAAAATCCCTTAACGTGAGTTTTCGTT
CCACTGAGCGTCAGACCCCGTAGAAAAGATCAAAGGATCTTCTTGAAATCCTTTTTTTCT
GCGCGTAATCTGCTGCTTGCAAACAAAAAAACCACCGCTACCAGCGGTGGTTTGTTTGCC
GGATCAAGAGCTACCAACTCTTTTTCCGAAGGTAACTGGCTTCAGCAGAGCGCAGATACC
AAATACTGTCCTTCTAGTGTAGCCGTAGTTAGGCCACCACTTCAAGAACTCTGTAGCACC
GCCTACATACCTCGCTCTGCTAATCCTGTTACCAGTGGCTGCTGCCAGTGGCGATAAGTC
GTGTCTTACCGGGTTGGACTCAAGACGATAGTTACCGGATAAGGCGCAGCGGTCGGGCTG
AACGGGGGGTTCGTGCACACAGCCCAGCTTGGAGCGAACGACCTACACCGAACTGAGATA
CCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTA
TCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAACGC
CTGGTATCTTTATAGTCCTGTCGGGTTTCGCCACCTCTGACTTGAGCGTCGATTTTTGTG
ATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTT
CCTGGCCTTTTGCTGGCCTTTTGCTCACATGTTCTTTCCTGCGTTATCCCCTGATTCTGT
GGATAACCGTATTACCGCCTTTGAGTGAGCTGATACCGGAAATACAGGAACGCACGCTGG
ATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGG
GGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGC
GCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATC
GCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGT
CTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGA
GGATCGAGATCTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAA
ACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGA
AGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTG
CCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTT
GTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTG
CGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAA
TTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTTTGTTTA
TTTTTCTAAATACATTCAAATATGTATCCGCTCAT