SLC35D1 ORF clone FXC01063

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Flexi ORF Clone FXC01063

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Clone info.

Species

human

Clone Name

pF1KA0260 Sequence (with vector) Restriction Map

Product ID

FXC01063

HaloTag Clone PID

FHC01063

ORF Sequence

DNA sequence (1065 bp)
Protein sequence (355 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB385301]

Gene

KIAA0260

Symbol

SLC35D1

Alias : SHNKND, UGTREL7

Description

solute carrier family 35 (UDP-GlcA/UDP-GalNAc transporter), member D1

Original Clone ID

ha07062

Features of the cloned ORF sequence

Description

Length: 1065 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 355 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS636.1 1.5e-161 100.0 SLC35D1 CCDS6717.1 1.7e-85 57.7 SLC35D2 CCDS69625.1 5.4e-33 40.0 SLC35D2 CCDS34544.1 1.2e-17 28.4 SLC35D3 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR004853 201 329 PF03151 Domain of unknown function DUF250
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 36 TLTVFLKLLAAGFYGVSSFLIVV 58 SECONDARY 23 2 71 SSLCVGLGQMVATVAVLWVGKAL 93 PRIMARY 23 3 109 TFPLPLLYFGNQITGLFST 127 SECONDARY 19 4 131 NLPMFTVLRRFSILFTMFAEGVL 153 SECONDARY 23 5 158 FSWGIKMTVFAMIIGAFVAASSD 180 PRIMARY 23 6 184 DLEGYAFILINDVLTAANGAYVK 206 SECONDARY 23 7 217 YGLLYYNALFMILPTLAIAYFTG 239 SECONDARY 23 8 253 TLFLLQFTLSCVMGFILMYATVL 275 PRIMARY 23 9 283 LTTTIVGCIKNILITYIGMVFGG 305 SECONDARY 23 10 312 TNFIGLNISIAGSLVYSYITFTE 334 SECONDARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_055954 355 269250,610804 100.0 100.0 XP_006710541 382 269250,610804 92.9 100.0 XP_011539372 382 269250,610804 92.9 100.0 NP_008932 337 609182 57.7 87.0 XP_005251732 290 609182 49.7 87.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KA0260 Download

>KIAA0260  1065 bp
ATGGCGGAAGTTCATAGACGTCAGCATGCTCGGGTTAAAGGAGAAGCCCCCGCGAAATCC
TCCACACTCCGAGATGAGGAGGAGCTGGGGATGGCGTCGGCCGAAACGCTGACCGTGTTT
CTGAAGCTGCTGGCCGCCGGCTTTTACGGCGTGAGCTCCTTCCTGATCGTGGTGGTGAAT
AAGAGCGTGCTCACCAATTACAGATTTCCCTCCTCACTATGTGTTGGACTTGGCCAGATG
GTGGCCACAGTGGCAGTTCTCTGGGTGGGAAAGGCGCTCAGAGTAGTCAAGTTTCCTGAC
CTTGACAGAAATGTACCTCGAAAGACGTTTCCACTACCTCTACTATATTTTGGGAACCAA
ATCACGGGACTGTTCAGCACAAAGAAACTGAACTTGCCAATGTTTACAGTTCTGAGAAGG
TTCTCCATCCTGTTTACAATGTTTGCTGAAGGAGTTTTACTCAAGAAGACTTTTTCTTGG
GGTATTAAAATGACTGTATTTGCAATGATTATTGGAGCCTTTGTAGCTGCCAGCTCTGAC
TTGGCATTTGATCTGGAAGGATATGCTTTTATTCTGATAAACGATGTCCTAACAGCAGCA
AATGGTGCATACGTAAAACAAAAATTAGATTCAAAAGAGCTGGGAAAATATGGACTGCTC
TATTACAATGCACTGTTCATGATTCTGCCCACCCTGGCCATTGCGTATTTCACAGGAGAT
GCACAAAAGGCTGTGGAGTTTGAAGGCTGGGCTGACACCCTCTTTCTTCTGCAGTTCACC
CTCTCCTGTGTGATGGGGTTTATCTTAATGTACGCCACAGTACTCTGCACGCAGTATAAT
TCTGCTCTTACAACTACAATAGTTGGCTGTATTAAGAATATATTAATAACTTATATTGGA
ATGGTCTTTGGTGGAGATTATATTTTCACGTGGACAAACTTCATTGGTTTAAATATCAGC
ATTGCTGGGAGCCTGGTATATTCCTATATCACTTTCACTGAAGAGCAGCTGAGCAAACAG
TCAGAGGCTAATAACAAGCTGGACATTAAGGGGAAAGGAGCAGTG

ORF Protein

Cloned ORF protein sequence for pF1KA0260 Download

>KIAA0260  355 aa
MAEVHRRQHARVKGEAPAKSSTLRDEEELGMASAETLTVFLKLLAAGFYGVSSFLIVVVN
KSVLTNYRFPSSLCVGLGQMVATVAVLWVGKALRVVKFPDLDRNVPRKTFPLPLLYFGNQ
ITGLFSTKKLNLPMFTVLRRFSILFTMFAEGVLLKKTFSWGIKMTVFAMIIGAFVAASSD
LAFDLEGYAFILINDVLTAANGAYVKQKLDSKELGKYGLLYYNALFMILPTLAIAYFTGD
AQKAVEFEGWADTLFLLQFTLSCVMGFILMYATVLCTQYNSALTTTIVGCIKNILITYIG
MVFGGDYIFTWTNFIGLNISIAGSLVYSYITFTEEQLSKQSEANNKLDIKGKGAV

ORF+Vector

Nucleotide Sequence (with vector) for pF1KA0260 Download

>pF1KA0260  4178 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGGCGGAAGTT
CATAGACGTCAGCATGCTCGGGTTAAAGGAGAAGCCCCCGCGAAATCCTCCACACTCCGA
GATGAGGAGGAGCTGGGGATGGCGTCGGCCGAAACGCTGACCGTGTTTCTGAAGCTGCTG
GCCGCCGGCTTTTACGGCGTGAGCTCCTTCCTGATCGTGGTGGTGAATAAGAGCGTGCTC
ACCAATTACAGATTTCCCTCCTCACTATGTGTTGGACTTGGCCAGATGGTGGCCACAGTG
GCAGTTCTCTGGGTGGGAAAGGCGCTCAGAGTAGTCAAGTTTCCTGACCTTGACAGAAAT
GTACCTCGAAAGACGTTTCCACTACCTCTACTATATTTTGGGAACCAAATCACGGGACTG
TTCAGCACAAAGAAACTGAACTTGCCAATGTTTACAGTTCTGAGAAGGTTCTCCATCCTG
TTTACAATGTTTGCTGAAGGAGTTTTACTCAAGAAGACTTTTTCTTGGGGTATTAAAATG
ACTGTATTTGCAATGATTATTGGAGCCTTTGTAGCTGCCAGCTCTGACTTGGCATTTGAT
CTGGAAGGATATGCTTTTATTCTGATAAACGATGTCCTAACAGCAGCAAATGGTGCATAC
GTAAAACAAAAATTAGATTCAAAAGAGCTGGGAAAATATGGACTGCTCTATTACAATGCA
CTGTTCATGATTCTGCCCACCCTGGCCATTGCGTATTTCACAGGAGATGCACAAAAGGCT
GTGGAGTTTGAAGGCTGGGCTGACACCCTCTTTCTTCTGCAGTTCACCCTCTCCTGTGTG
ATGGGGTTTATCTTAATGTACGCCACAGTACTCTGCACGCAGTATAATTCTGCTCTTACA
ACTACAATAGTTGGCTGTATTAAGAATATATTAATAACTTATATTGGAATGGTCTTTGGT
GGAGATTATATTTTCACGTGGACAAACTTCATTGGTTTAAATATCAGCATTGCTGGGAGC
CTGGTATATTCCTATATCACTTTCACTGAAGAGCAGCTGAGCAAACAGTCAGAGGCTAAT
AACAAGCTGGACATTAAGGGGAAAGGAGCAGTGGTTTAAACGAATTCGAGCTCGGTACCC
GGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCG
AAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGC
CTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCTTGC
TGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTGCTT
TCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGG
TCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCG
CCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGT
AAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGATGG
CGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAACAA
GATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGACTGG
GCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGC
CCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAGGCA
GCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTC
ACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCA
TCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCAATGCGGCGGCTGCAT
ACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCGAAACATCGCATCGAGCGAGCA
CGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAGCATCAGGGG
CTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGATCTC
GTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTTTCT
GGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTGGCT
ACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTTTAC
GGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTCTTC
TGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCA
CTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTG
AGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCA
TAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAA
CCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCC
TGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGC
GCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCT
GGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCG
TCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAG
GATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTA
CGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGG
AAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTT
TGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTT
TTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAG
ATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGC
TGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGT
GGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCA
GGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTG
ATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTAC
TGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGT
AGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGAT
AAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTC
AGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAA
CTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCT
GTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACG
TTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATC
AAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTTTGT
TTATTTTTCTAAATACATTCAAATATGTATCCGCTCAT