SH3GLB2 ORF clone FXC00931

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Flexi ORF Clone FXC00931

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Clone info.

Species

human

Clone Name

pF1KSDA1848 Sequence (with vector) Restriction Map

Product ID

FXC00931

HaloTag Clone PID

FHC00931

ORF Sequence

DNA sequence (1212 bp)
Protein sequence (404 aa)

Linker Type

Flexi_RBS type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB384306]

Gene

KIAA1848

Symbol

SH3GLB2

Alias : PP6569, PP9455, RRIG1

Description

SH3-domain GRB2-like endophilin B2, transcript variant 1

Original Clone ID

bm03548

Features of the cloned ORF sequence

Description

Length: 1212 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 404 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS69680.1 4.3e-123 100.0 SH3GLB2 CCDS6916.1 1.1e-83 97.5 SH3GLB2 CCDS72819.1 6.8e-55 60.2 SH3GLB1 CCDS55612.1 1e-38 60.7 SH3GLB1 CCDS710.1 1.3e-38 59.0 SH3GLB1 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR004148 16 283 PF03114 BAR IPR011511 349 401 PF07653 Variant SH3 HMMSmart IPR004148 7 284 SM00721 BAR IPR001452 347 404 SM00326 Src homology-3 domain ProfileScan IPR004148 24 291 PS51021 BAR IPR001452 344 404 PS50002 Src homology-3 domain
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_001273974 404 609288 100.0 100.0 XP_005252155 400 609288 99.0 100.0 XP_006717254 399 609288 98.5 100.0 NP_064530 395 609288 97.5 100.0 NP_001273975 395 609288 97.5 100.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KSDA1848 Download

>KIAA1848  1212 bp
ATGGACTTCAACATGAAGAAGCTGGCGTCGGACGCGGGCATCTTCTTCACCCGGGCGGTG
CAGTTCACGGAGGAGAAATTTGGCCAGGCTGAGAAGACTGAGCTTGATGCCCACTTTGAA
AACCTTCTGGCCCGGGCAGACAGCACCAAGAACTGGACAGAGAAGATCTTGAGGCAGACA
GAGGTGCTGCTGCAGCCCAACCCCAGTGCCCGAGTGGAGGAGTTCCTGTATGAGAAGCTG
GACAGGAAGGTCCCCTCAAGGGTCACCAACGGGGAGCTGCTGGCTCAGTACATGGCAGAC
GCGGCCAGTGAGCTGGGGCCGACCACCCCCTATGGGAAGACACTGATCAAGGTGGCAGAA
GCTGAAAAGCAACTGGGAGCCGCGGAGAGGGATTTTATCCACACGGCCTCCATCAGCTTC
CTCACACCCTTGCGCAACTTCCTGGAGGGGGACTGGAAGACCATCTCGAAGGAGAGGCGG
CTCCTCCAAAACCGGCGTCTGGACTTGGATGCCTGCAAAGCGAGGCTGAAGAAGGCCAAG
GCTGCAGAAGCCAAAGCCACGTGTGAGGGAGATACGGTGCCTGACTTTCAGGAGACTAGA
CCTCGTAATTACATTCTCTCGGCCAGCGCCTCCGCGCTCTGGAATGATGAAGTGGACAAG
GCCGAGCAGGAGCTCCGCGTGGCCCAGACAGAGTTTGACCGGCAAGCAGAAGTGACCCGT
CTCTTGCTGGAGGGAATCAGTAGCACTCACGTGAACCACCTGCGCTGCCTCCACGAGTTC
GTCAAGTCTCAGACAACCTACTACGCACAGTGCTACCGCCACATGCTGGACTTGCAGAAG
CAGCTGGGCAGCTCCCAGGGTGCCATATTTCCCGGCACCTTCGTGGGCACCACAGAGCCC
GCCTCCCCACCCCTGAGCAGCACCTCACCCACCACTGCTGCGGCCACTATGCCTGTGGTG
CCCTCTGTGGCCAGCCTGGCCCCTCCGGGGGAGGCCTCGCTCTGCCTGGAAGAGGTGGCC
CCCCCTGCCAGTGGGACCCGCAAAGCTCGGGTGCTCTATGACTACGAGGCAGCCGACAGC
AGTGAGCTGGCCCTGCTGGCTGATGAGCTCATCACTGTCTACAGCCTGCCTGGCATGGAC
CCTGACTGGCTCATTGGCGAGAGAGGCAACAAGAAGGGCAAGGTCCCTGTCACCTACTTG
GAACTGCTCAGC

ORF Protein

Cloned ORF protein sequence for pF1KSDA1848 Download

>KIAA1848  404 aa
MDFNMKKLASDAGIFFTRAVQFTEEKFGQAEKTELDAHFENLLARADSTKNWTEKILRQT
EVLLQPNPSARVEEFLYEKLDRKVPSRVTNGELLAQYMADAASELGPTTPYGKTLIKVAE
AEKQLGAAERDFIHTASISFLTPLRNFLEGDWKTISKERRLLQNRRLDLDACKARLKKAK
AAEAKATCEGDTVPDFQETRPRNYILSASASALWNDEVDKAEQELRVAQTEFDRQAEVTR
LLLEGISSTHVNHLRCLHEFVKSQTTYYAQCYRHMLDLQKQLGSSQGAIFPGTFVGTTEP
ASPPLSSTSPTTAAATMPVVPSVASLAPPGEASLCLEEVAPPASGTRKARVLYDYEAADS
SELALLADELITVYSLPGMDPDWLIGERGNKKGKVPVTYLELLS

ORF+Vector

Nucleotide Sequence (with vector) for pF1KSDA1848 Download

>pF1KSDA1848  4349 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCTTTCGAAGGAGAT
AGAACCATGGACTTCAACATGAAGAAGCTGGCGTCGGACGCGGGCATCTTCTTCACCCGG
GCGGTGCAGTTCACGGAGGAGAAATTTGGCCAGGCTGAGAAGACTGAGCTTGATGCCCAC
TTTGAAAACCTTCTGGCCCGGGCAGACAGCACCAAGAACTGGACAGAGAAGATCTTGAGG
CAGACAGAGGTGCTGCTGCAGCCCAACCCCAGTGCCCGAGTGGAGGAGTTCCTGTATGAG
AAGCTGGACAGGAAGGTCCCCTCAAGGGTCACCAACGGGGAGCTGCTGGCTCAGTACATG
GCAGACGCGGCCAGTGAGCTGGGGCCGACCACCCCCTATGGGAAGACACTGATCAAGGTG
GCAGAAGCTGAAAAGCAACTGGGAGCCGCGGAGAGGGATTTTATCCACACGGCCTCCATC
AGCTTCCTCACACCCTTGCGCAACTTCCTGGAGGGGGACTGGAAGACCATCTCGAAGGAG
AGGCGGCTCCTCCAAAACCGGCGTCTGGACTTGGATGCCTGCAAAGCGAGGCTGAAGAAG
GCCAAGGCTGCAGAAGCCAAAGCCACGTGTGAGGGAGATACGGTGCCTGACTTTCAGGAG
ACTAGACCTCGTAATTACATTCTCTCGGCCAGCGCCTCCGCGCTCTGGAATGATGAAGTG
GACAAGGCCGAGCAGGAGCTCCGCGTGGCCCAGACAGAGTTTGACCGGCAAGCAGAAGTG
ACCCGTCTCTTGCTGGAGGGAATCAGTAGCACTCACGTGAACCACCTGCGCTGCCTCCAC
GAGTTCGTCAAGTCTCAGACAACCTACTACGCACAGTGCTACCGCCACATGCTGGACTTG
CAGAAGCAGCTGGGCAGCTCCCAGGGTGCCATATTTCCCGGCACCTTCGTGGGCACCACA
GAGCCCGCCTCCCCACCCCTGAGCAGCACCTCACCCACCACTGCTGCGGCCACTATGCCT
GTGGTGCCCTCTGTGGCCAGCCTGGCCCCTCCGGGGGAGGCCTCGCTCTGCCTGGAAGAG
GTGGCCCCCCCTGCCAGTGGGACCCGCAAAGCTCGGGTGCTCTATGACTACGAGGCAGCC
GACAGCAGTGAGCTGGCCCTGCTGGCTGATGAGCTCATCACTGTCTACAGCCTGCCTGGC
ATGGACCCTGACTGGCTCATTGGCGAGAGAGGCAACAAGAAGGGCAAGGTCCCTGTCACC
TACTTGGAACTGCTCAGCTACGTAGTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCT
CTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGC
TGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAAACG
GGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAA
AACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGC
GCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCG
TTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTG
CTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGG
AAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGA
TCAAGATCTGATCAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAACAAGATGGATTG
CACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAACAG
ACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTT
TTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTA
TCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCG
GGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTT
GCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCAATGCGGCGGCTGCATACGCTTGAT
CCGGCTACCTGCCCATTCGACCACCAAGCGAAACATCGCATCGAGCGAGCACGCACTCGG
ATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCA
GCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACT
CATGGCGATGCCTGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATC
GACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTGGCTACCCGTGAT
ATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCC
GCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGA
CTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGC
GGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGG
CCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCG
CCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGG
ACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGAC
CCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCA
TAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGT
GCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTC
CAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAG
AGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACAC
TAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGT
TGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAA
GCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGG
GTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAA
AAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCC
CTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAAT
GTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATT
GCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTG
AACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCC
TCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCG
AGATCTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAA
TTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAA
ACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGC
ATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGT
CGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGC
AACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGC
AGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTTTTC
TAAATACATTCAAATATGTATCCGCTCAT