MFAP3L ORF clone FXC00579

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Flexi ORF Clone FXC00579

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Clone info.

Species

human

Clone Name

pF1KSDA0626 Sequence (with vector) Restriction Map

Product ID

FXC00579

HaloTag Clone PID

FHC00579

ORF Sequence

DNA sequence (1227 bp)
Protein sequence (409 aa)

Linker Type

Flexi_RBS type

more Linker info

Vector Type

pF1KM Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB383925]

Gene

KIAA0626

Symbol

MFAP3L

Alias : NYD-sp9

Description

microfibrillar-associated protein 3-like, transcript variant 1

Original Clone ID

hh00753

Features of the cloned ORF sequence

Description

Length: 1227 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 409 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS34103.1 1.1e-118 100.0 MFAP3L CCDS43281.1 4.7e-87 100.0 MFAP3L CCDS4324.1 2.5e-42 55.1 MFAP3 CCDS47319.1 1.5e-31 65.4 MFAP3 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR013098 47 142 PF07679 Immunoglobulin I-set HMMSmart IPR003599 53 143 SM00409 Immunoglobulin subtype IPR003598 59 132 SM00408 Immunoglobulin subtype 2 ProfileScan IPR007110 47 141 PS50835 Immunoglobulin-like
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 6 SHLTVCFLPSVPFLILVSTLATA 28 PRIMARY 23 2 35 TLNGTNVVLGSVPVIIARTDHII 57 SECONDARY 23 3 153 YMVVCLVAFTIVMVLNITRLCMM 175 PRIMARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) XP_016864360 409 616523 100.0 100.0 XP_016864357 409 616523 100.0 100.0 XP_016864358 409 616523 100.0 100.0 XP_016864359 409 616523 100.0 100.0 NP_067679 409 616523 100.0 100.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KSDA0626 Download

>KIAA0626  1227 bp
ATGGATCGATTGAAGAGCCATCTGACTGTGTGCTTTCTACCTTCTGTGCCCTTTTTAATC
CTAGTATCCACTCTAGCCACCGCTAAGAGTGTGACTAACAGCACTTTAAATGGCACTAAC
GTGGTCTTGGGCTCTGTGCCCGTAATCATTGCCAGAACTGACCATATCATAGTCAAGGAA
GGGAACAGTGCCTTGATTAACTGTAGTGTTTATGGCATCCCTGACCCACAGTTCAAGTGG
TATAATTCCATTGGCAAGCTGCTGAAAGAAGAAGAGGATGAGAAGGAGAGAGGAGGAGGA
AAATGGCAAATGCACGACAGCGGCCTCCTGAACATCACCAAGGTATCCTTCTCAGACCGA
GGTAAATACACGTGTGTGGCTTCTAACATCTACGGCACCGTGAACAACACGGTGACCTTG
CGCGTCATCTTCACTTCTGGAGACATGGGTGTCTACTACATGGTCGTGTGCCTGGTGGCC
TTCACCATCGTCATGGTCCTCAATATCACCCGCCTGTGCATGATGAGCAGCCATCTAAAG
AAGACTGAGAAGGCCATCAATGAGTTCTTTAGGACCGAAGGTGCAGAGAAGCTGCAGAAG
GCATTTGAGATCGCCAAGCGCATCCCCATCATCACCTCCGCCAAAACTCTAGAGCTTGCC
AAAGTCACCCAGTTCAAAACCATGGAGTTCGCCCGCTACATCGAAGAGCTTGCCAGGAGC
GTGCCTCTGCCGCCTCTCATTATGAACTGCAGGACTATCATGGAGGAGATTATGGAGGTG
GTTGGGCTGGAGGAGCAGGGGCAGAATTTTGTGAGGCATACTCCAGAGGGCCAGGAGGCC
GCAGACAGGGATGAGGTCTACACAATCCCCAACTCTCTGAAGCGGAGCGACTCCCCTGCC
GCTGACTCGGACGCCTCATCGCTGCACGAGCAACCTCAGCAAATTGCCATCAAGGTGTCA
GTTCACCCGCAGTCCAAAAAAGAGCATGCAGATGACCAAGAGGGTGGACAGTTTGAAGTC
AAAGATGTAGAGGAGACAGAACTGTCGGCGGAACATTCCCCCGAAACTGCAGAACCTTCT
ACCGATGTCACGTCCACCGAGCTAACATCTGAAGAGCCAACACCTGTTGAGGTACCAGAT
AAGGTACTGCCGCCAGCTTACCTGGAAGCCACAGAGCCAGCAGTGACACATGACAAAAAC
ACCTGCATTATTTACGAAAGCCATGTC

ORF Protein

Cloned ORF protein sequence for pF1KSDA0626 Download

>KIAA0626  409 aa
MDRLKSHLTVCFLPSVPFLILVSTLATAKSVTNSTLNGTNVVLGSVPVIIARTDHIIVKE
GNSALINCSVYGIPDPQFKWYNSIGKLLKEEEDEKERGGGKWQMHDSGLLNITKVSFSDR
GKYTCVASNIYGTVNNTVTLRVIFTSGDMGVYYMVVCLVAFTIVMVLNITRLCMMSSHLK
KTEKAINEFFRTEGAEKLQKAFEIAKRIPIITSAKTLELAKVTQFKTMEFARYIEELARS
VPLPPLIMNCRTIMEEIMEVVGLEEQGQNFVRHTPEGQEAADRDEVYTIPNSLKRSDSPA
ADSDASSLHEQPQQIAIKVSVHPQSKKEHADDQEGGQFEVKDVEETELSAEHSPETAEPS
TDVTSTELTSEEPTPVEVPDKVLPPAYLEATEPAVTHDKNTCIIYESHV

ORF+Vector

Nucleotide Sequence (with vector) for pF1KSDA0626 Download

>pF1KSDA0626  4366 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCTTTCGAAGGAGAT
AGAACCATGGATCGATTGAAGAGCCATCTGACTGTGTGCTTTCTACCTTCTGTGCCCTTT
TTAATCCTAGTATCCACTCTAGCCACCGCTAAGAGTGTGACTAACAGCACTTTAAATGGC
ACTAACGTGGTCTTGGGCTCTGTGCCCGTAATCATTGCCAGAACTGACCATATCATAGTC
AAGGAAGGGAACAGTGCCTTGATTAACTGTAGTGTTTATGGCATCCCTGACCCACAGTTC
AAGTGGTATAATTCCATTGGCAAGCTGCTGAAAGAAGAAGAGGATGAGAAGGAGAGAGGA
GGAGGAAAATGGCAAATGCACGACAGCGGCCTCCTGAACATCACCAAGGTATCCTTCTCA
GACCGAGGTAAATACACGTGTGTGGCTTCTAACATCTACGGCACCGTGAACAACACGGTG
ACCTTGCGCGTCATCTTCACTTCTGGAGACATGGGTGTCTACTACATGGTCGTGTGCCTG
GTGGCCTTCACCATCGTCATGGTCCTCAATATCACCCGCCTGTGCATGATGAGCAGCCAT
CTAAAGAAGACTGAGAAGGCCATCAATGAGTTCTTTAGGACCGAAGGTGCAGAGAAGCTG
CAGAAGGCATTTGAGATCGCCAAGCGCATCCCCATCATCACCTCCGCCAAAACTCTAGAG
CTTGCCAAAGTCACCCAGTTCAAAACCATGGAGTTCGCCCGCTACATCGAAGAGCTTGCC
AGGAGCGTGCCTCTGCCGCCTCTCATTATGAACTGCAGGACTATCATGGAGGAGATTATG
GAGGTGGTTGGGCTGGAGGAGCAGGGGCAGAATTTTGTGAGGCATACTCCAGAGGGCCAG
GAGGCCGCAGACAGGGATGAGGTCTACACAATCCCCAACTCTCTGAAGCGGAGCGACTCC
CCTGCCGCTGACTCGGACGCCTCATCGCTGCACGAGCAACCTCAGCAAATTGCCATCAAG
GTGTCAGTTCACCCGCAGTCCAAAAAAGAGCATGCAGATGACCAAGAGGGTGGACAGTTT
GAAGTCAAAGATGTAGAGGAGACAGAACTGTCGGCGGAACATTCCCCCGAAACTGCAGAA
CCTTCTACCGATGTCACGTCCACCGAGCTAACATCTGAAGAGCCAACACCTGTTGAGGTA
CCAGATAAGGTACTGCCGCCAGCTTACCTGGAAGCCACAGAGCCAGCAGTGACACATGAC
AAAAACACCTGCATTATTTACGAAAGCCATGTCTACGTAGTTTAAACGAATTCGAGCTCG
GTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAA
AGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCT
TGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGGTTC
GCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGCTAC
CTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCAT
CCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCC
CTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCC
TCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGGATC
TGATGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGGTCGTTTCGCATGCTT
GAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGCTAT
GACTGGGCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAG
GGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAGGAC
GAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTCGAC
GTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGATCTC
CTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCAATGCGGCGG
CTGCATACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCGAAACATCGCATCGAG
CGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAGCAT
CAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGTGAG
GATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATGGTGGAAAATGGCCGC
TTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATAGCG
TTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTCGTG
CTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGACGAG
TTCTTCTGAGCGGGACTCTGGGGTTCGCGAAATGACCGACCAAGCGACGCCCAACCGGTA
TCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAG
AACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCG
TTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGG
TGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTG
CGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGA
AGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGC
TCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGT
AACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACT
GGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGG
CCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTT
ACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGT
GGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCT
TTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTG
GTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGA
ACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTG
GATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAA
ATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTG
CTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAAT
CCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCG
TCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGC
GGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATG
CCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGA
GTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCG
TTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGA
TTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGC
CAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAAC
TCTTTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCAT