ZGPAT ORF clone FXC00286

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Flexi ORF Clone FXC00286

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Clone info.

Species

human

Clone Name

pF1KA1847 Sequence (with vector) Restriction Map

Product ID

FXC00286

HaloTag Clone PID

FHC00286

ORF Sequence

DNA sequence (1533 bp)
Protein sequence (511 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB385509]

Gene

KIAA1847

Symbol

ZGPAT

Alias : GPATC6, GPATCH6, KIAA1847, ZC3H9, ZC3HDC9, ZIP

Description

zinc finger, CCCH-type with G patch domain, transcript variant 3

Original Clone ID

bm00425

Features of the cloned ORF sequence

Description

Length: 1533 bp
Restriction map A Restriction map B

Features of the protein sequence

Description

Length: 511 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS13535.1 2.7e-167 99.8 ZGPAT CCDS13534.1 1.4e-94 96.0 ZGPAT CCDS56203.1 9.9e-89 98.0 ZGPAT The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR000467 313 354 PF01585 D111/G-patch HMMSmart IPR000571 175 200 SM00356 Zinc finger IPR000467 311 357 SM00443 D111/G-patch ProfileScan IPR000571 175 201 PS50103 Zinc finger IPR000467 313 359 PS50174 D111/G-patch Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KA1847 Download

>KIAA1847  1533 bp
ATGGACGAGGAGAGCCTGGAGTCGGCCTTGCAGACCTACCGTGCGCAGCTGCAGCAGGTG
GAGCTGGCCTTGGGCGCCGGCCTGGATTCGTCTGAGCAGGCTGACCTGCGCCAGCTGCAG
GGGGACCTGAAGGAGCTCATCGAGCTCACCGAGGCCAGCCTGGTGTCTGTCAGGAAGAGC
AGGTTGTTGGCCGCGCTGGACGAAGAGCGCCCGGGCCGCCAGGAAGATGCTGAGTACCAG
GCTTTCCGGGAGGCCATCACTGAGGCGGTGGAGGCACCAGCAGCGGCCCGTGGGTCCGGA
TCAGAGACCGTTCCTAAAGCAGAGGCGGGGCCAGAATCTGCGGCAGGTGGGCAGGAGGAG
GAAGAGGGAGAGGACGAGGAAGAGCTGAGTGGGACAAAGGTGAGCGCGCCCTACTACAGC
TCCTGGGGCACTCTGGAGTATCACAACGCCATGGTGGTGGGAACGGAAGAGGCGGAGGAT
GGCTCGGCGGGTGTCCGTGTGCTTTACCTGTACCCCACTCACAAGTCTCTGAAGCCGTGC
CCGTTCTTCCTGGAGGGAAAGTGCCGCTTTAAGGAGAACTGCAGGTTCTCCCATGGGCAG
GTGGTCTCTCTGGATGAGCTGCGCCCCTTCCAGGACCCAGACCTGAGCTCCCTGCAGGCC
GGCTCTGCGTGTCTGGCCAAGCACCAGGATGGCCTCTGGCACGCAGCACGCATCACCGAT
GTGGACAACGGCTACTACACAGTCAAGTTTGACTCGCTGCTGCTGAGGGAGGCCGTGGTG
GAGGGGGACGGCATCCTGCCCCCACTGCGCACAGAGGCCACAGAGTCCGACTCAGACAGC
GACGGTACGGGTGACTCCAGCTATGCCAGAGTGGTGGGGTCAGATGCTGTGGACTCTGGG
ACCTGCAGCTCTGCCTTTGCTGGCTGGGAGGTGCACACGCGAGGTATAGGCTCCAGACTC
CTCACCAAGATGGGCTATGAGTTTGGCAAGGGTTTGGGCCGACACGCGGAAGGCCGGGTG
GAGCCCATCCATGCTGTGGTGTTGCCTCGAGGGAAGTCGCTGGACCAGTGTGTGGAGACC
CTGCAGAAGCAGACCAGGGTTGGCAAGGCTGGCACCAACAAGCCCCCCAGGTGCCGGGGA
AGAGGGGCCAGGCCTGGGGGCCGCCCAGCTCCTCGGAATGTGTTTGACTTCCTCAATGAA
AAGCTGCAAGGTCAGGCTCCTGGGGCCCTAGAAGCCGGGGCGGCCCCAGCGGGGAGGAGG
AGCAAGGACATGTACCATGCCAGCAAGAGTGCCAAGCGGGCCCTGAGCCTGCGGCTCTTC
CAGACTGAGGAGAAGATCGAGCGAACCCAGCGGGACATCAGGAGCATCCAGGAGGCTCTC
GCCCGCAACGCTGGCCGGCATAGCGTGGCGTCAGCCCAGCTGCAGGAGAAGCTGGCAGGA
GCCCAGCGCCAGCTGGGGCAGCTCCGGGCTCAGGAAGCCGGCCTGCAGCAGGAGCAGAGG
AAGGCAGACACCCACAAGAAGATGACTGAGTTC

ORF Protein

Cloned ORF protein sequence for pF1KA1847 Download

>KIAA1847  511 aa
MDEESLESALQTYRAQLQQVELALGAGLDSSEQADLRQLQGDLKELIELTEASLVSVRKS
RLLAALDEERPGRQEDAEYQAFREAITEAVEAPAAARGSGSETVPKAEAGPESAAGGQEE
EEGEDEEELSGTKVSAPYYSSWGTLEYHNAMVVGTEEAEDGSAGVRVLYLYPTHKSLKPC
PFFLEGKCRFKENCRFSHGQVVSLDELRPFQDPDLSSLQAGSACLAKHQDGLWHAARITD
VDNGYYTVKFDSLLLREAVVEGDGILPPLRTEATESDSDSDGTGDSSYARVVGSDAVDSG
TCSSAFAGWEVHTRGIGSRLLTKMGYEFGKGLGRHAEGRVEPIHAVVLPRGKSLDQCVET
LQKQTRVGKAGTNKPPRCRGRGARPGGRPAPRNVFDFLNEKLQGQAPGALEAGAAPAGRR
SKDMYHASKSAKRALSLRLFQTEEKIERTQRDIRSIQEALARNAGRHSVASAQLQEKLAG
AQRQLGQLRAQEAGLQQEQRKADTHKKMTEF

ORF+Vector

Nucleotide Sequence (with vector) for pF1KA1847 Download

>pF1KA1847  4646 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGGACGAGGAG
AGCCTGGAGTCGGCCTTGCAGACCTACCGTGCGCAGCTGCAGCAGGTGGAGCTGGCCTTG
GGCGCCGGCCTGGATTCGTCTGAGCAGGCTGACCTGCGCCAGCTGCAGGGGGACCTGAAG
GAGCTCATCGAGCTCACCGAGGCCAGCCTGGTGTCTGTCAGGAAGAGCAGGTTGTTGGCC
GCGCTGGACGAAGAGCGCCCGGGCCGCCAGGAAGATGCTGAGTACCAGGCTTTCCGGGAG
GCCATCACTGAGGCGGTGGAGGCACCAGCAGCGGCCCGTGGGTCCGGATCAGAGACCGTT
CCTAAAGCAGAGGCGGGGCCAGAATCTGCGGCAGGTGGGCAGGAGGAGGAAGAGGGAGAG
GACGAGGAAGAGCTGAGTGGGACAAAGGTGAGCGCGCCCTACTACAGCTCCTGGGGCACT
CTGGAGTATCACAACGCCATGGTGGTGGGAACGGAAGAGGCGGAGGATGGCTCGGCGGGT
GTCCGTGTGCTTTACCTGTACCCCACTCACAAGTCTCTGAAGCCGTGCCCGTTCTTCCTG
GAGGGAAAGTGCCGCTTTAAGGAGAACTGCAGGTTCTCCCATGGGCAGGTGGTCTCTCTG
GATGAGCTGCGCCCCTTCCAGGACCCAGACCTGAGCTCCCTGCAGGCCGGCTCTGCGTGT
CTGGCCAAGCACCAGGATGGCCTCTGGCACGCAGCACGCATCACCGATGTGGACAACGGC
TACTACACAGTCAAGTTTGACTCGCTGCTGCTGAGGGAGGCCGTGGTGGAGGGGGACGGC
ATCCTGCCCCCACTGCGCACAGAGGCCACAGAGTCCGACTCAGACAGCGACGGTACGGGT
GACTCCAGCTATGCCAGAGTGGTGGGGTCAGATGCTGTGGACTCTGGGACCTGCAGCTCT
GCCTTTGCTGGCTGGGAGGTGCACACGCGAGGTATAGGCTCCAGACTCCTCACCAAGATG
GGCTATGAGTTTGGCAAGGGTTTGGGCCGACACGCGGAAGGCCGGGTGGAGCCCATCCAT
GCTGTGGTGTTGCCTCGAGGGAAGTCGCTGGACCAGTGTGTGGAGACCCTGCAGAAGCAG
ACCAGGGTTGGCAAGGCTGGCACCAACAAGCCCCCCAGGTGCCGGGGAAGAGGGGCCAGG
CCTGGGGGCCGCCCAGCTCCTCGGAATGTGTTTGACTTCCTCAATGAAAAGCTGCAAGGT
CAGGCTCCTGGGGCCCTAGAAGCCGGGGCGGCCCCAGCGGGGAGGAGGAGCAAGGACATG
TACCATGCCAGCAAGAGTGCCAAGCGGGCCCTGAGCCTGCGGCTCTTCCAGACTGAGGAG
AAGATCGAGCGAACCCAGCGGGACATCAGGAGCATCCAGGAGGCTCTCGCCCGCAACGCT
GGCCGGCATAGCGTGGCGTCAGCCCAGCTGCAGGAGAAGCTGGCAGGAGCCCAGCGCCAG
CTGGGGCAGCTCCGGGCTCAGGAAGCCGGCCTGCAGCAGGAGCAGAGGAAGGCAGACACC
CACAAGAAGATGACTGAGTTCGTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCTCTA
GAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGA
GTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAAACGGGT
CTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAAAAC
CGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGCGCT
TGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTT
CTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTT
GCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAG
CCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGATCA
AGATCTGATCAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAACAAGATGGATTGCAC
GCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAACAGACA
ATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTT
GTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTATCG
TGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCGGGA
AGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTTGCT
CCTGCCGAGAAAGTATCCATCATGGCTGATGCAATGCGGCGGCTGCATACGCTTGATCCG
GCTACCTGCCCATTCGACCACCAAGCGAAACATCGCATCGAGCGAGCACGCACTCGGATG
GAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCAGCC
GAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACTCAT
GGCGATGCCTGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATCGAC
TGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTGGCTACCCGTGATATT
GCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCCGCT
CCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGACTC
TGGGGTTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGT
AATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCA
GCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCC
CCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACT
ATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCT
GCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAG
CTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCA
CGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAA
CCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGC
GAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAG
AAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGG
TAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCA
GCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTC
TGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAG
GATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTT
CGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTG
GCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCG
GCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAAC
GCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCG
TAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGA
TCTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTT
GCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACG
CCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATC
AAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGG
TGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAAC
GGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGA
AGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTTTTCTAA
ATACATTCAAATATGTATCCGCTCAT