Predicted genomic structure of FLJ00261

KOP
KOP Flexi HaloTag ORF List search

Predicted genomic structure of FLJ00261

Clone name	:	FLJ00261
Sequence length of the cDNA	:	4791 bp
Corresponding genomic sequence	:	gi568815591f_144262670
Length of the corresponding genomic region	:	17384 bp
Chromosome No.	:	7
Coding region of FLJ00261	:	1..4791
Result of GENSCAN

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Exon regions are assigned by SIM4

exon# query aa hit intron identity
(%)

start end start end start end boundary bp

1 1 3154 1 1052 100001 103154 GT..AG 531 99

2 3155 3212 1052 1071 103686 103743 GT..AG 433 100

3 3213 3277 1071 1093 104177 104241 GT..AG 191 100

4 3278 3531 1093 1177 104433 104686 GT..AG 3805 100

5 3532 3692 1178 1231 108492 108652 GT..AG 555 100

6 3693 3845 1231 1282 109208 109360 GT..AG 269 100

7 3846 3975 1282 1325 109630 109759 GT..AG 254 100

8 3976 4050 1326 1350 110014 110088 GT..AG 437 100

9 4051 4140 1351 1380 110526 110615 GT..AG 1447 98

10 4141 4298 1381 1433 112063 112220 GT..AG 624 100

11 4299 4460 1433 1487 112845 113006 GT..AG 1444 100

12 4461 4531 1487 1511 114451 114521 GT..AG 1571 100

13 4532 4636 1511 1546 116093 116197 GT..AG 1032 100

14 4637 4791 1546 1597 117230 117384 - 100

exon#	query		aa		hit		intron		identity (%)
exon#	start	end	start	end	start	end	boundary	bp	identity (%)
1	1	3154	1	1052	100001	103154	GT..AG	531	99
2	3155	3212	1052	1071	103686	103743	GT..AG	433	100
3	3213	3277	1071	1093	104177	104241	GT..AG	191	100
4	3278	3531	1093	1177	104433	104686	GT..AG	3805	100
5	3532	3692	1178	1231	108492	108652	GT..AG	555	100
6	3693	3845	1231	1282	109208	109360	GT..AG	269	100
7	3846	3975	1282	1325	109630	109759	GT..AG	254	100
8	3976	4050	1326	1350	110014	110088	GT..AG	437	100
9	4051	4140	1351	1380	110526	110615	GT..AG	1447	98
10	4141	4298	1381	1433	112063	112220	GT..AG	624	100
11	4299	4460	1433	1487	112845	113006	GT..AG	1444	100
12	4461	4531	1487	1511	114451	114521	GT..AG	1571	100
13	4532	4636	1511	1546	116093	116197	GT..AG	1032	100
14	4637	4791	1546	1597	117230	117384	-		100