# 0 Query: pF1KSDA0588, 932 aa
# 1 CCDS4260.1 PCDHGA12 gene_id:26025|Hs108|chr5 (932 aa)
# 2 CCDS75346.1 PCDHGA12 gene_id:26025|Hs108|chr5 (820 aa)
# 3 CCDS47292.1 PCDHGA10 gene_id:56106|Hs108|chr5 (936 aa)
# 4 CCDS47294.1 PCDHGA11 gene_id:56105|Hs108|chr5 (935 aa)
# 5 CCDS47290.1 PCDHGA3 gene_id:56112|Hs108|chr5 (932 aa)
//
exp sw-scr id% from to
1 0 6061 100.0 1 932
2 0 5219 100.0 1 808
3 0 4691 77.8 12 936
4 0 4624 76.1 4 935
5 0 4551 75.4 8 932
//
0 ( 1) MIPARLHRDYKG--LVLLGILLGTLWETGCTQIRYSVPEELEKGSRVGDISRDLGLEPRE
1 ( 1) MIPARLHRDYKG--LVLLGILLGTLWETGCTQIRYSVPEELEKGSRVGDISRDLGLEPRE
2 ( 1) MIPARLHRDYKG--LVLLGILLGTLWETGCTQIRYSVPEELEKGSRVGDISRDLGLEPRE
3 ( 12) .......KDCSG--LVLLCLFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLAPRE
4 ( 4) ....RLQRGDRSRLLLLLCIFLGTLRGFRARQIRYSVPEETEKGSFVGNISKDLGLEPRE
5 ( 8) .......RNGRG--LALLCALLGTLCETGSGQIRYSVSEELDKGSFVGNIANDLGLEPRE
//
0 ( 59) LAERGVRIIPRGRTQLFALNPRSGSLVTAGRIDREELCMGAIKCQLNLDILMEDKVKIYG
1 ( 59) LAERGVRIIPRGRTQLFALNPRSGSLVTAGRIDREELCMGAIKCQLNLDILMEDKVKIYG
2 ( 59) LAERGVRIIPRGRTQLFALNPRSGSLVTAGRIDREELCMGAIKCQLNLDILMEDKVKIYG
3 ( 63) LAERGVRIVSRGRTQLFSLNPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVKLFG
4 ( 60) LAKRGVRIVSRGKTQLFAVNPRSGSLITAGRIDREELCETVSSCFLNMELLVEDTLKIYG
5 ( 59) LAERGVRIVSRGRTQLFSLNPQSGSLVTAERIDREELCAQIPLCLVKINILVEDKLKIFE
//
0 ( 119) VEVEVRDINDNAPYFRESELEIKISENAATEMRFPLPHAWDPDIGKNSLQSYELSPNTHF
1 ( 119) VEVEVRDINDNAPYFRESELEIKISENAATEMRFPLPHAWDPDIGKNSLQSYELSPNTHF
2 ( 119) VEVEVRDINDNAPYFRESELEIKISENAATEMRFPLPHAWDPDIGKNSLQSYELSPNTHF
3 ( 123) IEIEVTDINDNAPKFQAENLDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNKHF
4 ( 120) VEVEIIDINDNAPSFQEDEVEIKVSEHAIPGARFALPNARDPDVGVNSLQSYQLSPNNYF
5 ( 119) VEIEIKDINDNAPNFPTEELEIKIGELTVPGTRFPIKTAFDPDVGINSLQNYKLSPNDYF
//
0 ( 179) SLIVQNGADGSKYPELVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDN
1 ( 179) SLIVQNGADGSKYPELVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDN
2 ( 179) SLIVQNGADGSKYPELVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDN
3 ( 183) SLRVQSRANGVKYPELVLEHSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDANDN
4 ( 180) SLQLRGRTDGAKNPELVLEGSLDREKEAAHLLLLTALDGGDPIRKGAVPIRVVVLDVNDH
5 ( 179) SLAVNSVSEGAKYPELVLERALDREKKEIHQLVLVASDGGDPVHSGNLHIQVIVLDANDN
//
0 ( 239) APAFAQPEYRASVPENLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQVFKLDCNS
1 ( 239) APAFAQPEYRASVPENLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQVFKLDCNS
2 ( 239) APAFAQPEYRASVPENLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQVFKLDCNS
3 ( 243) APVFTLPEYRVSVPENLPVGTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLNKYT
4 ( 240) IPMFTQSVYRVSVPENISSGTRVLMVNATDPDEGINGEVMYSFRNMESKASEIFQLDSQT
5 ( 239) PPMFTQPEYRVSVWENVPVGTRLLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVS
//
0 ( 299) GTISTIGELDHEESGFYQMEVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPE
1 ( 299) GTISTIGELDHEESGFYQMEVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPE
2 ( 299) GTISTIGELDHEESGFYQMEVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPE
3 ( 303) GEIKISENLDYEETGFYEIEIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSPVTE
4 ( 300) GEVQVRGSLDFEKYRFYEMEIQGQDGGGLFTTTTMLITVVDVNDNAPEITITSSINSILE
5 ( 299) GEVSILKSLDYEDAMFYEIKIEAQDGPGLLSRAKILVTVLDVNDNAPEITITSLTSSVPE
//
0 ( 359) NSPRGTLIALLNVNDQDSEENGQVICFIQGNLPFKLEKSYGNYYSLVTDIVLDREQVPSY
1 ( 359) NSPRGTLIALLNVNDQDSEENGQVICFIQGNLPFKLEKSYGNYYSLVTDIVLDREQVPSY
2 ( 359) NSPRGTLIALLNVNDQDSEENGQVICFIQGNLPFKLEKSYGNYYSLVTDIVLDREQVPSY
3 ( 363) DSPLGTVVALLNVHDLDSEQNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQVSSY
4 ( 360) NSPPGTVIALLNVQDQDSGENGQVSCFIPNHLPFKLEKTYGNYYKLITSRVLDRELVQSY
5 ( 359) EGTVGREIALIDVHDRDSGQNGQVEVFVLGNLPFKLEKSIDQYYRLVTATSLDREQISEY
//
0 ( 419) NITVTATDRGTPPLSTETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHD
1 ( 419) NITVTATDRGTPPLSTETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHD
2 ( 419) NITVTATDRGTPPLSTETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHD
3 ( 423) NITVTATDGGSPPLSTEAHFMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVTALD
4 ( 420) NITLTATDQGSPPLSAETHVWLNVADDNDNPPVFPHSSYSAYIPENNPRGASIFSVTALD
5 ( 419) NISLRASDGGSPPLSTETHITLHVIDINDNPPTFPHLSYSAYIPENNPRGASIFSVTAQD
//
0 ( 479) PDCEENAQITYSLAENTIQGASLSSYVSINSDTGVLYALSSFDYEQFRDLQVKVMARDNG
1 ( 479) PDCEENAQITYSLAENTIQGASLSSYVSINSDTGVLYALSSFDYEQFRDLQVKVMARDNG
2 ( 479) PDCEENAQITYSLAENTIQGASLSSYVSINSDTGVLYALSSFDYEQFRDLQVKVMARDNG
3 ( 483) PDSKENAQIIYSLAEDTIQGVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTASDSG
4 ( 480) PDSKQNALVTYSLTDDTVQGVPLSSYVSINSNTGVLYALQSFDYEQFRDLELRVIARDSG
5 ( 479) PDSNNNARITYALTEDTLQGAPLSSFVSINSNTGVLYALRSFDYEQFRDLKLLVTASDSG
//
0 ( 539) HPPLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDS
1 ( 539) HPPLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDS
2 ( 539) HPPLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDS
3 ( 543) DPPLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDS
4 ( 540) DPPLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDS
5 ( 539) NPPLSSNVSLNLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDS
//
0 ( 599) GQNAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATV
1 ( 599) GQNAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATV
2 ( 599) GQNAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATV
3 ( 603) GQNAWLSYRLLKASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATV
4 ( 600) GQNAWLSYRLLKASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATV
5 ( 599) GQNAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATV
//
0 ( 659) TLTVAVADSIPQVLADLGSLESPANSETSDLTLYLVVAVAAVSCVFLAFVILLLALRLRR
1 ( 659) TLTVAVADSIPQVLADLGSLESPANSETSDLTLYLVVAVAAVSCVFLAFVILLLALRLRR
2 ( 659) TLTVAVADSIPQVLADLGSLESPANSETSDLTLYLVVAVAAVSCVFLAFVILLLALRLRR
3 ( 663) TLTVAVADSIPQVLADLGSFESPANSETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRR
4 ( 660) TLTVAVADSIPEVLADLGSLESLANSETSDLSLYLVVAVAAVSCIFLVFVIVLLALRLWR
5 ( 659) TLTVAVADRIPDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLRR
//
0 ( 719) WHKSRLLQASGGGLTGAPASHFVGVDGVQAFLQTYSHEVSLTTDSRKSHLIFPQPNYADM
1 ( 719) WHKSRLLQASGGGLTGAPASHFVGVDGVQAFLQTYSHEVSLTTDSRKSHLIFPQPNYADM
2 ( 719) WHKSRLLQASGGGLTGAPASHFVGVDGVQAFLQTYSHEVSLTTDSRKSHLIFPQPNYADM
3 ( 723) WHKSRLLQASGGGLTGVSGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADT
4 ( 720) WHKSRLLQASEGGLAGMPTSHFVGVDGVQAFLQTYSHEVSLIADSQKSHLIFPQPNYGDT
5 ( 719) WHKSRLLQASGGGLASTPGSHFVGADGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADT
//
0 ( 779) LVSQESFEKSEPLLLSGDS--VFSKDSHGLIEQAPPNTDWRFSQAQRPGTSGSQNGDDTG
1 ( 779) LVSQESFEKSEPLLLSGDS--VFSKDSHGLIEQAPPNTDWRFSQAQRPGTSGSQNGDDTG
2 ( 779) LVSQESFEKSEPLLLSGDS--VFSKDSHGLIE............................
3 ( 783) LISQESCEKNDPLSLLDDS--KFPIEDTPLVPQAPPNTDWRFSQAQRPGTSGSQNGDDTG
4 ( 780) LISQESCEKSEPLLIAEDSAIILGKCDPTSNQQAPPNTDWRFSQAQRPGTSGSQNGDDTG
5 ( 779) LISQESCEKSEPLLITQDL--LEMKGDSNLLQQAPPNTDWRFSQAQRPGTSGSQNGDDTG
//
0 ( 837) TWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVY
1 ( 837) TWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVY
2 ( -) ............................................................
3 ( 841) TWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVY
4 ( 840) TWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVY
5 ( 837) TWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVY
//
0 ( 897) IPGSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
1 ( 897) IPGSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
2 ( -) ....................................
3 ( 901) IPGSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
4 ( 900) IPGSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
5 ( 897) IPGSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
//
