# 0 Query: pF1KSDA0375, 1516 aa
# 1 CCDS35008.1 RUSC2 gene_id:9853|Hs108|chr9 (1516 aa)
# 2 CCDS1112.1 RUSC1 gene_id:23623|Hs108|chr1 (433 aa)
# 3 CCDS41412.1 RUSC1 gene_id:23623|Hs108|chr1 (492 aa)
# 4 CCDS41410.1 RUSC1 gene_id:23623|Hs108|chr1 (902 aa)
//
exp sw-scr id% from to
1 0 10511 99.9 1 1516
2 2.6e-15 858 36.7 14 431
3 2.9e-15 858 36.7 73 490
4 4.6e-15 909 28.7 30 900
//
0 ( 1) MDSPPKLTGETLIVHHIPLVHCQVPDRQCCGGAGGGGGSTRPNPFCPPELGITQPDQDLG
1 ( 1) MDSPPKLTGETLIVHHIPLVHCQVPDRQCCGGAGGGGGSTRPNPFCPPELGITQPDQDLG
2 ( -) ............................................................
3 ( -) ............................................................
4 ( -) ............................................................
//
*
0 ( 61) QADSLLFSSLHSAPGGTARSIDSTKSRSRDGRGPGAPKRHNPFLLQEGVGEPGLGDLYDD
1 ( 61) QADSLLFSSLHSTPGGTARSIDSTKSRSRDGRGPGAPKRHNPFLLQEGVGEPGLGDLYDD
2 ( -) ............................................................
3 ( -) ............................................................
4 ( -) ............................................................
//
0 ( 121) SIGDSATQQSFHLHGTGQPNFHLSSFQLPPSGPRVGRPWGTTRSRAGVVEGQEQEPVMTL
1 ( 121) SIGDSATQQSFHLHGTGQPNFHLSSFQLPPSGPRVGRPWGTTRSRAGVVEGQEQEPVMTL
2 ( -) ............................................................
3 ( -) ............................................................
4 ( -) ............................................................
//
0 ( 181) DTQQCGTSHCCRPELEAETMELDECGGPGGSGSGGGASDTSGFSFDQEWKLSSDESPRNP
1 ( 181) DTQQCGTSHCCRPELEAETMELDECGGPGGSGSGGGASDTSGFSFDQEWKLSSDESPRNP
2 ( -) ............................................................
3 ( -) ............................................................
4 ( -) ............................................................
//
0 ( 241) GCSGSGDQHCRCSSTSSQSEAADQSMGYVSDSSCNSSDGVLVTFSTLYNKMHGTPRANLN
1 ( 241) GCSGSGDQHCRCSSTSSQSEAADQSMGYVSDSSCNSSDGVLVTFSTLYNKMHGTPRANLN
2 ( -) ............................................................
3 ( -) ............................................................
4 ( -) ............................................................
//
0 ( 301) SAPQSCSDSSFCSHSDPGAFYLDLQPSPFESKMSYESHHPESGGREGGYGCPHASSPELD
1 ( 301) SAPQSCSDSSFCSHSDPGAFYLDLQPSPFESKMSYESHHPESGGREGGYGCPHASSPELD
2 ( -) ............................................................
3 ( -) ............................................................
4 ( -) ............................................................
//
0 ( 361) ANCNSYRPHCEPCPAVADLTACFQSQARLVVATQNYYKLVTCDLSSQSSPSPAGSSITSC
1 ( 361) ANCNSYRPHCEPCPAVADLTACFQSQARLVVATQNYYKLVTCDLSSQSSPSPAGSSITSC
2 ( -) ............................................................
3 ( -) ............................................................
4 ( -) ............................................................
//
0 ( 421) SEEHTKISPPPGPGPDPGPSQPSEYYLFQKPEVQPEEQEAVSSSTQAAAAVGPTVLEGQV
1 ( 421) SEEHTKISPPPGPGPDPGPSQPSEYYLFQKPEVQPEEQEAVSSSTQAAAAVGPTVLEGQV
2 ( -) ............................................................
3 ( -) ............................................................
4 ( 30) ....................................................PELQEGPL
//
0 ( 481) YTNTSPPNLSTGRQRSRSYDRSLQRSPPVRLGSLERMLSCPVRLSEGPAAMAGPGSPPRR
1 ( 481) YTNTSPPNLSTGRQRSRSYDRSLQRSPPVRLGSLERMLSCPVRLSEGPAAMAGPGSPPRR
2 ( -) ............................................................
3 ( -) ............................................................
4 ( 38) --STPPPPGDTGGKESRG---------PCS-GTLVDANSNSPAVPCRCCQEHGPGLENRQ
//
0 ( 541) VTSFAELAKGRKKTGGSGSPPLRVSVGDSSQEFSPIQEAQQDRGAPLDEGTCCSHSLPPM
1 ( 541) VTSFAELAKGRKKTGGSGSPPLRVSVGDSSQEFSPIQEAQQDRGAPLDEGTCCSHSLPPM
2 ( -) ............................................................
3 ( -) ............................................................
4 ( 86) DPSQEE--EGAASPSDPGCSSSLSSCSDLSPDESPVSVYLRD--LPGDEDAHPQPSIIPL
//
0 ( 601) PLGPGMDLLGPDPSPPWS----TQVCQGPHSSEMPPAGLRATGQGPLAQLMD-PGPALPG
1 ( 601) PLGPGMDLLGPDPSPPWS----TQVCQGPHSSEMPPAGLRATGQGPLAQLMD-PGPALPG
2 ( -) ............................................................
3 ( -) ............................................................
4 ( 142) EQGSPLASAGPGTCSPDSFCCSPDSCSGASSS--PDPGLD-SNCNALTTCQDVPSPGLE-
//
0 ( 656) SPANSHTQRDARARADGGGTESRPVL--RYSKEQRPTTLPIQPFVFQHHFPKQLAKARAL
1 ( 656) SPANSHTQRDARARADGGGTESRPVL--RYSKEQRPTTLPIQPFVFQHHFPKQLAKARAL
2 ( -) ............................................................
3 ( -) ............................................................
4 ( 198) -------EEDERAEQDLPTSELLEADDGKIDAGKTEPSWKINP-IWKIDTEKTKAEWKTT
//
0 ( 714) HSLSQLYSLSG---CSRTQQPAPLAAPAAQVSVPAPSGEPQASTPRATGRGARKAGSEPE
1 ( 714) HSLSQLYSLSG---CSRTQQPAPLAAPAAQVSVPAPSGEPQASTPRATGRGARKAGSEPE
2 ( -) ............................................................
3 ( -) ............................................................
4 ( 250) ENNNTGWKNNGNVNSSWKSEPEKFDSGWKTNTRITDSGS-KTDAGKIDGGWRSDVSEEPV
//
0 ( 771) TSRP-SPLGSYSPIRSVGPFGPSTDSSASTSCSPPPEQPTATESLPPWSHSCPSAVRPAT
1 ( 771) TSRP-SPLGSYSPIRSVGPFGPSTDSSASTSCSPPPEQPTATESLPPWSHSCPSAVRPAT
2 ( -) ............................................................
3 ( -) ............................................................
4 ( 309) PHRTITSFHELAQKRKRGPGLPLVPQAKKDRSDWLIVFSPDTE-LPP-SGS------PGG
//
0 ( 830) SQQPQKEDQKILTLTEYRLHGTGSLPPLGSWRSGLSRAESLARGGGEGSMATRPSNANHL
1 ( 830) SQQPQKEDQKILTLTEYRLHGTGSLPPLGSWRSGLSRAESLARGGGEGSMATRPSNANHL
2 ( -) ............................................................
3 ( -) ............................................................
4 ( 361) SSAPPRE---VTTFKELRSRSRAPAPPVPP------RDPPV----GWALVPPRPP-----
//
0 ( 890) SPQALKWREYRRKNPLGPPGLSGSLDRRSQEARLARRNPIFEFPGSLSAASHLNCRLNGQ
1 ( 890) SPQALKWREYRRKNPLGPPGLSGSLDRRSQEARLARRNPIFEFPGSLSAASHLNCRLNGQ
2 ( -) ............................................................
3 ( -) ............................................................
4 ( 403) -PPPVPPR--RKKN---RPGLQPIAEGQSEEGRAVSPAAGEEAPA---------------
//
0 ( 950) AVKPLPLTCPDFQDPFSLTEKPPAEFCLSPDGSSEAISIDLLQKKGLVKAVNIAVDLIVA
1 ( 950) AVKPLPLTCPDFQDPFSLTEKPPAEFCLSPDGSSEAISIDLLQKKGLVKAVNIAVDLIVA
2 ( 14) ..........................................QKKGLLIAVSVSVDKIIS
3 ( 73) ..........................................QKKGLLIAVSVSVDKIIS
4 ( 442) AKEPGAQAGLEVRSSWSFAGVPGAQRLWMAEAQSGTGQLQE-QKKGLLIAVSVSVDKIIS
//
0 ( 1010) HFGTSRDPGVKAKLGNSSVSPNVGHLVLKYLCPAVRAVLEDGLKAFVLDVIIGQRKNMPW
1 ( 1010) HFGTSRDPGVKAKLGNSSVSPNVGHLVLKYLCPAVRAVLEDGLKAFVLDVIIGQRKNMPW
2 ( 32) HFGAARNLVQKAQLGDSRLSPDVGHLVLTTLCPALHALVADGLKPFRKDLITGQRRSSPW
3 ( 91) HFGAARNLVQKAQLGDSRLSPDVGHLVLTTLCPALHALVADGLKPFRKDLITGQRRSSPW
4 ( 501) HFGAARNLVQKAQLGDSRLSPDVGHLVLTTLCPALHALVADGLKPFRKDLITGQRRSSPW
//
0 ( 1070) SVVEASTQLGPSTKVLHGLYNKVSQFPELTSHTMRFNAFILGLLNIRSLEFWFNHLYNHE
1 ( 1070) SVVEASTQLGPSTKVLHGLYNKVSQFPELTSHTMRFNAFILGLLNIRSLEFWFNHLYNHE
2 ( 92) SVVEASVKPGSSTRSLGTLYSQVSRLAPLSSSRSRFHAFILGLLNTKQLELWFSSLQEDA
3 ( 151) SVVEASVKPGSSTRSLGTLYSQVSRLAPLSSSRSRFHAFILGLLNTKQLELWFSSLQEDA
4 ( 561) SVVEASVKPGSSTRSLGTLYSQVSRLAPLSSSRSRFHAFILGLLNTKQLELWFSSLQEDA
//
0 ( 1130) DIIQTHYQPWGFLSAAHTVCPGLFEELLLLLQPLALLPFSLDLLFQHRLLQSGQQQRQHK
1 ( 1130) DIIQTHYQPWGFLSAAHTVCPGLFEELLLLLQPLALLPFSLDLLFQHRLLQSGQQQRQHK
2 ( 152) GLLSLLYLPTGFFSLARGGCPSLSTELLLLLQPLSVLTFHLDLLFEH-------------
3 ( 211) GLLSLLYLPTGFFSLARGGCPSLSTELLLLLQPLSVLTFHLDLLFEH-------------
4 ( 621) GLLSLLYLPTGFFSLARGGCPSLSTELLLLLQPLSVLTFHLDLLFEH-------------
//
0 ( 1190) ELLRVSQDLLLSAHSTLQLARARGQEGPGDVDRAAQGERVKGVGASEGGEEEEEEEETEE
1 ( 1190) ELLRVSQDLLLSAHSTLQLARARGQEGPGDVDRAAQGERVKGVGASEGGEEEEEEEETEE
2 ( 199) -------------HHHLPLGPPQAPAPPGPPPALQQTMQAM---LHFGGRLAQSLRGTSK
3 ( 258) -------------HHHLPLGPPQAPAPPGPPPALQQTMQAM---LHFGGRLAQSLRGTSK
4 ( 668) -------------HHHLPLGPPQAPAPPGPPPALQQTMQAM---LHFGGRLAQSLRGTSK
//
0 ( 1250) VAEAAGGSGRARWARGGQAGWWYQLMQSSQVYIDGSIEGSRFPRGSSNSSSEKKKGAGGG
1 ( 1250) VAEAAGGSGRARWARGGQAGWWYQLMQSSQVYIDGSIEGSRFPRGSSNSSSEKKKGAGGG
2 ( 243) EA-ASDPSDSPNLPTPG--SWWEQLTQASRVYASGGTEG--FPLS---------------
3 ( 302) EA-ASDPSDSPNLPTPG--SWWEQLTQASRVYASGGTEG--FPLS---------------
4 ( 712) EA-ASDPSDSPNLPTPG--SWWEQLTQASRVYASGGTEG--FPLS---------------
//
0 ( 1310) GPPQAPPPREGVV--EGAEACPASEEALGRERGWPFWMGSPPDSVLAELRRSREREGPAA
1 ( 1310) GPPQAPPPREGVV--EGAEACPASEEALGRERGWPFWMGSPPDSVLAELRRSREREGPAA
2 ( 283) ---RWAPGRHGTAAEEGAQERPLPTDEMAPGRG--LWLG--------------RLFGVPG
3 ( 342) ---RWAPGRHGTAAEEGAQERPLPTDEMAPGRG--LWLG--------------RLFGVPG
4 ( 752) ---RWAPGRHGTAAEEGAQERPLPTDEMAPGRG--LWLG--------------RLFGVPG
//
0 ( 1368) SPAENEEGASEPSPGGIKWGHLFGSRKAQREARPTNRLPSDWLSLDKSMFQLVAQTVGSR
1 ( 1368) SPAENEEGASEPSPGGIKWGHLFGSRKAQREARPTNRLPSDWLSLDKSMFQLVAQTVGSR
2 ( 324) GPAENENGA-------------LKSRR-----------PSSWLPPTVSVLALVKR--GAP
3 ( 383) GPAENENGA-------------LKSRR-----------PSSWLPPTVSVLALVKR--GAP
4 ( 793) GPAENENGA-------------LKSRR-----------PSSWLPPTVSVLALVKR--GAP
//
0 ( 1428) RE-PEPKESLQEPHSPALPSSPPCEVQALCHHLATGPGQLSFHKGDILRVLGRAGGDWLR
1 ( 1428) RE-PEPKESLQEPHSPALPSSPPCEVQALCHHLATGPGQLSFHKGDILRVLGRAGGDWLR
2 ( 358) PEMPSPQE--LEASAPRMVQTHRA-VRALCDHTAARPDQLSFRRGEVLRVITTVDEDWLR
3 ( 417) PEMPSPQE--LEASAPRMVQTHRA-VRALCDHTAARPDQLSFRRGEVLRVITTVDEDWLR
4 ( 827) PEMPSPQE--LEASAPRMVQTHRA-VRALCDHTAARPDQLSFRRGEVLRVITTVDEDWLR
//
0 ( 1487) CSRGPDSGLVPLAYVTLTPTPSPTPGSSQN
1 ( 1487) CSRGPDSGLVPLAYVTLTPTPSPTPGSSQN
2 ( 415) CGRDGMEGLVPVGYTSL.............
3 ( 474) CGRDGMEGLVPVGYTSL.............
4 ( 884) CGRDGMEGLVPVGYTSL.............
//
