# 0 Query: pF1KE0199, 1106 aa
# 1 CCDS8940.1 GLI1 gene_id:2735|Hs108|chr12 (1106 aa)
# 2 CCDS53806.1 GLI1 gene_id:2735|Hs108|chr12 (1065 aa)
# 3 CCDS53807.1 GLI1 gene_id:2735|Hs108|chr12 (978 aa)
# 4 CCDS5465.1 GLI3 gene_id:2737|Hs108|chr7 (1580 aa)
# 5 CCDS33283.1 GLI2 gene_id:2736|Hs108|chr2 (1586 aa)
//
exp sw-scr id% from to
1 1.3e-182 7851 100.0 1 1106
2 6.1e-170 7460 96.3 1 1065
3 1.1e-161 6974 100.0 1 978
4 1.6e-25 1805 37.5 220 1322
5 1.2e-23 1894 38.0 176 1322
//
0 ( 1) MFNSMTPPPISSYGEPCCLRPLPSQGAPSVGTEGLSGPPFCHQANLMSG-PHS-YG---P
1 ( 1) MFNSMTPPPISSYGEPCCLRPLPSQGAPSVGTEGLSGPPFCHQANLMSG-PHS-YG---P
2 ( 1) MFNSMTPPPISSYGEPCCLRPLPSQGAPSVGTE---------------------------
3 ( -) ............................................................
4 ( 220) ...................RGLSPTDAPHA---GVSPAEYYHQMALLTG-QRSPYADIIP
5 ( 176) .......................................YYHQMTLVAGHPAP-YG---D
//
0 ( 56) A-RETNSC----------TEGPL------------FSSPRSAVKLTKKRALSISPLSDAS
1 ( 56) A-RETNSC----------TEGPL------------FSSPRSAVKLTKKRALSISPLSDAS
2 ( 34) ------------------------------------------VKLTKKRALSISPLSDAS
3 ( -) ............................................................
4 ( 257) S-AATAGTGAIHMEYLHAMDSTR------------FSSPRLSARPSRKRTLSISPLSDHS
5 ( 193) LLMQSGGA----------ASAPHLHDYLNPVDVSRFSSPRVTPRLSRKRALSISPLSDAS
//
0 ( 93) LDLQTVIRTSPSSLVAFIN-SRCTSPG-GSYGHLSIGTMSPSLGF-----PAQMN-----
1 ( 93) LDLQTVIRTSPSSLVAFIN-SRCTSPG-GSYGHLSIGTMSPSLGF-----PAQMN-----
2 ( 52) LDLQTVIRTSPSSLVAFIN-SRCTSPG-GSYGHLSIGTMSPSLGF-----PAQMN-----
3 ( 1) ......................................MSPSLGF-----PAQMN-----
4 ( 304) FDLQTMIRTSPNSLVTILNNSRSSSSASGSYGHLSASAISPALSFTYSSAPVSLHM----
5 ( 243) LDLQRMIRTSPNSLVAYINNSRSSSAASGSYGHLSAGALSPAFTF-----PHPINPVAYQ
//
0 ( 141) ----HQK------------GPSPSFG-----VQPC----GPHDSARG--G----MIPHPQ
1 ( 141) ----HQK------------GPSPSFG-----VQPC----GPHDSARG--G----MIPHPQ
2 ( 100) ----HQK------------GPSPSFG-----VQPC----GPHDSARG--G----MIPHPQ
3 ( 13) ----HQK------------GPSPSFG-----VQPC----GPHDSARG--G----MIPHPQ
4 ( 360) ----HQQILSRQQSLGSAFGHSPPL------IHPA----PTFPTQRPIPGIPTVLNPVQV
5 ( 298) QILSQQR------------GLGSAFGHTPPLIQPSPTFLAQQPMALT--S----INATPT
//
0 ( 170) SRGPFPTC-----QLKSELDMLVG------------KCREEP-----------LEGDMSS
1 ( 170) SRGPFPTC-----QLKSELDMLVG------------KCREEP-----------LEGDMSS
2 ( 129) SRGPFPTC-----QLKSELDMLVG------------KCREEP-----------LEGDMSS
3 ( 42) SRGPFPTC-----QLKSELDMLVG------------KCREEP-----------LEGDMSS
4 ( 406) SSGPSESS-----QNKPTSESAVSSTGDPMHNK---RSKIKP-----------DE-DLPS
5 ( 340) QLSSSSNCLSDTNQNKQSSESAVSSTVNPVAIHKRSKVKTEPEGLRPASPLALTQGQVSG
//
0 ( 202) PNSTGIQDPLLG--MLDGREDLEREE-KREPESV-YETDCRWDGCSQEFDSQEQLVHHIN
1 ( 202) PNSTGIQDPLLG--MLDGREDLEREE-KREPESV-YETDCRWDGCSQEFDSQEQLVHHIN
2 ( 161) PNSTGIQDPLLG--MLDGREDLEREE-KREPESV-YETDCRWDGCSQEFDSQEQLVHHIN
3 ( 74) PNSTGIQDPLLG--MLDGREDLEREE-KREPESV-YETDCRWDGCSQEFDSQEQLVHHIN
4 ( 446) PGARGQQEQPEG--TTLVKEEGDKDESKQEPEVI-YETNCHWEGCAREFDTQEQLVHHIN
5 ( 400) HGSCGCALPLSQEQLADLKEDLDRDDCKQEAEVVIYETNCHWEDCTKEYDTQEQLVHHIN
//
0 ( 258) SEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLEN
1 ( 258) SEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLEN
2 ( 217) SEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLEN
3 ( 130) SEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLEN
4 ( 503) NDHIHGEKKEFVCRWLDCSREQKPFKAQYMLVVHMRRHTGEKPHKCTFEGCTKAYSRLEN
5 ( 460) NEHIHGEKKEFVCRWQACTREQKPFKAQYMLVVHMRRHTGEKPHKCTFEGCSKAYSRLEN
//
0 ( 318) LKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPS
1 ( 318) LKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPS
2 ( 277) LKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPS
3 ( 190) LKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPS
4 ( 563) LKTHLRSHTGEKPYVCEHEGCNKAFSNASDRAKHQNRTHSNEKPYVCKIPGCTKRYTDPS
5 ( 520) LKTHLRSHTGEKPYVCEHEGCNKAFSNASDRAKHQNRTHSNEKPYICKIPGCTKRYTDPS
//
0 ( 378) SLRKHVKTVHGPDAHVTKRHRGD-GPLPRAPSISTVEPKRE--REGGPI-----------
1 ( 378) SLRKHVKTVHGPDAHVTKRHRGD-GPLPRAPSISTVEPKRE--REGGPI-----------
2 ( 337) SLRKHVKTVHGPDAHVTKRHRGD-GPLPRAPSISTVEPKRE--REGGPI-----------
3 ( 250) SLRKHVKTVHGPDAHVTKRHRGD-GPLPRAPSISTVEPKRE--REGGPI-----------
4 ( 623) SLRKHVKTVHGPEAHVTKKQRGDIHPRPPPPRDSGSHSQSR--SPGRPTQGALGEQQDLS
5 ( 580) SLRKHVKTVHGPDAHVTKKQRND-VHL-RTPLLKENGDSEAGTEPGGPE-----------
//
0 ( 424) -----REES-------------RLTVPEGAMKPQPSPGAQSSCSSDHSPAGSAANTDSGV
1 ( 424) -----REES-------------RLTVPEGAMKPQPSPGAQSSCSSDHSPAGSAANTDSGV
2 ( 383) -----REES-------------RLTVPEGAMKPQPSPGAQSSCSSDHSPAGSAANTDSGV
3 ( 296) -----REES-------------RLTVPEGAMKPQPSPGAQSSCSSDHSPAGSAANTDSGV
4 ( 681) NTTSKREECLQV----------KTVKAEKPMTSQPSPGGQSSCSSQQSPISNYSN--SGL
5 ( 627) -----STEASSTSQAVEDCLHVRAIKTESSGLCQSSPGAQSSCSSEPSPLGSAPNNDSGV
//
0 ( 466) EMTGNAGGSTEDLSSLDEGPCI------AGT---------GL------STLRR-------
1 ( 466) EMTGNAGGSTEDLSSLDEGPCI------AGT---------GL------STLRR-------
2 ( 425) EMTGNAGGSTEDLSSLDEGPCI------AGT---------GL------STLRR-------
3 ( 338) EMTGNAGGSTEDLSSLDEGPCI------AGT---------GL------STLRR-------
4 ( 729) ELPLTDGGSIGDLSAIDETPIMDSTISTATT---------AL------ALQARRNPAGTK
5 ( 682) EMPGTGPGSLGDLTALDDTPPG------ADTSALAAPSAGGLQLRKHMTTMHR-------
//
0 ( 498) -LENLRLDQLHQ-------LR-------PI--------------G-TRGLKLPSLSHTGT
1 ( 498) -LENLRLDQLHQ-------LR-------PI--------------G-TRGLKLPSLSHTGT
2 ( 457) -LENLRLDQLHQ-------LR-------PI--------------G-TRGLKLPSLSHTGT
3 ( 370) -LENLRLDQLHQ-------LR-------PI--------------G-TRGLKLPSLSHTGT
4 ( 774) WMEHVKLERLKQVNGMFPRLN-------PILPPKAPAVSPLIGNG-TQSNNTCSLGGPMT
5 ( 729) -FEQLKKEKLKS-------LKDSCSWAGPT--------------PHTRNTKLPPLPGSGS
//
0 ( 528) TVSRRV---GP----PVS----L---------------------ERRSSSSSSISSAYTV
1 ( 528) TVSRRV---GP----PVS----L---------------------ERRSSSSSSISSAYTV
2 ( 487) TVSRRV---GP----PVS----L---------------------ERRSSSSSSISSAYTV
3 ( 400) TVSRRV---GP----PVS----L---------------------ERRSSSSSSISSAYTV
4 ( 826) LLPGRSDLSGV----DVTMLNML---------------------NRRDSSASTISSAYLS
5 ( 767) ILENFS---GSGGGGPAG----LLPNPRLSELSASEVTMLSQLQERRDSSTSTVSSAYTV
//
0 ( 556) SRRSSLASP-------------------------F------PPGSP-----PEN------
1 ( 556) SRRSSLASP-------------------------F------PPGSP-----PEN------
2 ( 515) SRRSSLASP-------------------------F------PPGSP-----PEN------
3 ( 428) SRRSSLASP-------------------------F------PPGSP-----PEN------
4 ( 861) SRRSSGISPCFSSRRSSEASQAEGRPQNVSVADSY------DPIST-----DAS------
5 ( 820) SRRSSGISP-------------------------YFSSRRSSEASPLGAGRPHNASSADS
//
0 ( 574) -------------------GASS-------LPGLM---PAQHYLLRARYASARGGGTSPT
1 ( 574) -------------------GASS-------LPGLM---PAQHYLLRARYASARGGGTSPT
2 ( 533) -------------------GASS-------LPGLM---PAQHYLLRARYASARGGGTSPT
3 ( 446) -------------------GASS-------LPGLM---PAQHYLLRARYASARGGGTSPT
4 ( 904) -------------------RRSSEASQSDGLPSLLSLTPAQQYRLKAKYAAATGG-PPPT
5 ( 855) YDPISTDASRRSSEASQCSGGSG-------LLNLT---PAQQYSLRAKYAAATGG-PPPT
//
0 ( 605) AASSLDRIG-----------------GLPMP--PWRS--------------R--------
1 ( 605) AASSLDRIG-----------------GLPMP--PWRS--------------R--------
2 ( 564) AASSLDRIG-----------------GLPMP--PWRS--------------R--------
3 ( 477) AASSLDRIG-----------------GLPMP--PWRS--------------R--------
4 ( 944) PLPNMERMSLKTRLALLGDALEP---GVALP--PVHAPRRCSDGGAHGYGRR--------
5 ( 904) PLPGLERMSLRTRLALLDAPERTLPAGCPRPLGPRRG--------------SDGPTYGHG
//
0 ( 624) -----AEYPGYNPNAGVTRRASDPAQAADRP-APARVQRFKSLG-CVHT---PPTVAGGG
1 ( 624) -----AEYPGYNPNAGVTRRASDPAQAADRP-APARVQRFKSLG-CVHT---PPTVAGGG
2 ( 583) -----AEYPGYNPNAGVTRRASDPAQAADRP-APARVQRFKSLG-CVHT---PPTVAGGG
3 ( 496) -----AEYPGYNPNAGVTRRASDPAQAADRP-APARVQRFKSLG-CVHT---PPTVAGGG
4 ( 991) -----HLQPHDAPGHGV-RRASDPVRTGSEGLALPRVPRFSSLSSC--N---PPAMATSA
5 ( 950) HAGAAPAFPHEAPGGGA-RRASDPVRRPDAL-SLPRVQRFHSTH-NVNPGPLPPCADRRG
//
0 ( 674) -------QNF------D-PYLPTSVY---SPQPPSITENAAMDARGLQEEPEVGTSMVGS
1 ( 674) -------QNF------D-PYLPTSVY---SPQPPSITENAAMDARGLQEEPEVGTSMVGS
2 ( 633) -------QNF------D-PYLPTSVY---SPQPPSITENAAMDARGLQEEPEVGTSMVGS
3 ( 546) -------QNF------D-PYLPTSVY---SPQPPSITENAAMDARGLQEEPEVGTSMVGS
4 ( 1040) EKRSLVLQNY------TRPEGGQSRNFHSSPCPPSITENVTLESLTMDAD---------A
5 ( 1007) -------LRLQSHPSTD-GGLARGAY---SPRPPSISENVAMEA--------VAAGVDGA
//
0 ( 717) GLNPYMDFPPTD-TLGYGGPEGAAAE----PYGARGPGSLPLGPG-------PPTNYGPN
1 ( 717) GLNPYMDFPPTD-TLGYGGPEGAAAE----PYGARGPGSLPLGPG-------PPTNYGPN
2 ( 676) GLNPYMDFPPTD-TLGYGGPEGAAAE----PYGARGPGSLPLGPG-------PPTNYGPN
3 ( 589) GLNPYMDFPPTD-TLGYGGPEGAAAE----PYGARGPGSLPLGPG-------PPTNYGPN
4 ( 1085) NLNDE-DFLPDD-VVQYLNSQNQAGYEQHFPSALPDDSKVPHGPGDFDAPGLPDSHAGQQ
5 ( 1048) GPEADLGLPEDDLVLPDDVVQYIKAH----ASGALDEGTGQVYPT-------ESTGFSDN
//
0 ( 765) ------PCPQQASYPDPTQETWGEF-PSHSGLYPGPKALGGTYSQCPRLEHYG---QVQV
1 ( 765) ------PCPQQASYPDPTQETWGEF-PSHSGLYPGPKALGGTYSQCPRLEHYG---QVQV
2 ( 724) ------PCPQQASYPDPTQETWGEF-PSHSGLYPGPKALGGTYSQCPRLEHYG---QVQV
3 ( 637) ------PCPQQASYPDPTQETWGEF-PSHSGLYPGPKALGGTYSQCPRLEHYG---QVQV
4 ( 1143) FHALEQPCPEGSKTDLPIQ--WNEV-SSGSADLSSSKLKCGPRPAVPQTRAFGFCNGMVV
5 ( 1097) ------P-----RLPSPGLHGQRRMVAADSNVGPSAPMLGG----CQL--GFG---APSS
//
0 ( 815) KPEQGCPVGSD--STGLAPCL--NAHPSEGPPHPQ---------PLFSHYPQPSPPQYLQ
1 ( 815) KPEQGCPVGSD--STGLAPCL--NAHPSEGPPHPQ---------PLFSHYPQPSPPQYLQ
2 ( 774) KPEQGCPVGSD--STGLAPCL--NAHPSEGPPHPQ---------PLFSHYPQPSPPQYLQ
3 ( 687) KPEQGCPVGSD--STGLAPCL--NAHPSEGPPHPQ---------PLFSHYPQPSPPQYLQ
4 ( 1200) HPQN--PLRSG--PAGGYQTLGENSNPYGGPEH------------LMLH----NSPGSGT
5 ( 1137) LNKNNMPVQWNEVSSGTVDAL---ASQVKPPPFPQGNLAVVQQKPAFGQYPGYSP-QGLQ
//
0 ( 862) SGP----YTQPPPDYLPSEPRPCLDFD--SPTHSTGQLKAQLVCNYVQSQQELLWEGGGR
1 ( 862) SGP----YTQPPPDYLPSEPRPCLDFD--SPTHSTGQLKAQLVCNYVQSQQELLWEGGGR
2 ( 821) SGP----YTQPPPDYLPSEPRPCLDFD--SPTHSTGQLKAQLVCNYVQSQQELLWEGGGR
3 ( 734) SGP----YTQPPPDYLPSEPRPCLDFD--SPTHSTGQLKAQLVCNYVQSQQELLWEGGGR
4 ( 1240) SGN----AFHEQPCKAPQYGN-CLNRQPVAPGALDGACGAGIQASKLKSTP--MQGSGGQ
5 ( 1193) ASPGGLDSTQP---HL--QPRS----G--APSQGIPRV------NYMQ---QLRQPVAGS
//
0 ( 916) EDAPAQEPSYQSPKFLGGS---QVSPSRAKAPVNTYGPGFGPNLPNHKSG--SYPTPSPC
1 ( 916) EDAPAQEPSYQSPKFLGGS---QVSPSRAKAPVNTYGPGFGPNLPNHKSG--SYPTPSPC
2 ( 875) EDAPAQEPSYQSPKFLGGS---QVSPSRAKAPVNTYGPGFGPNLPNHKSG--SYPTPSPC
3 ( 788) EDAPAQEPSYQSPKFLGGS---QVSPSRAKAPVNTYGPGFGPNLPNHKSG--SYPTPSPC
4 ( 1293) LNFGL--PV--APNESAGS---MVNGMQNQDPV---GQGY....................
5 ( 1233) Q-CPGMTTTM-SPHACYGQVHPQLSPSTISGALNQF-PQSCSNMPA-KPGHLGHPQQTEV
//
0 ( 971) HENFVVGANRASHRA-AAPPRLL----PPLPTCYGPLKVGGTNPSCGHPEVGRLGGGPAL
1 ( 971) HENFVVGANRASHRA-AAPPRLL----PPLPTCYGPLKVGGTNPSCGHPEVGRLGGGPAL
2 ( 930) HENFVVGANRASHRA-AAPPRLL----PPLPTCYGPLKVGGTNPSCGHPEVGRLGGGPAL
3 ( 843) HENFVVGANRASHRA-AAPPRLL----PPLPTCYGPLKVGGTNPSCGHPEVGRLGGGPAL
4 ( -) ............................................................
5 ( 1289) APDPTTMGNR--HRELGVPDSALAGVPPPHPVQSYP........................
//
0 ( 1026) YPPPEGQVCNPLDSLDLDNTQLDFVAILDEPQGLSPPPSHDQRGSSGHTPPPSGPPNMAV
1 ( 1026) YPPPEGQVCNPLDSLDLDNTQLDFVAILDEPQGLSPPPSHDQRGSSGHTPPPSGPPNMAV
2 ( 985) YPPPEGQVCNPLDSLDLDNTQLDFVAILDEPQGLSPPPSHDQRGSSGHTPPPSGPPNMAV
3 ( 898) YPPPEGQVCNPLDSLDLDNTQLDFVAILDEPQGLSPPPSHDQRGSSGHTPPPSGPPNMAV
4 ( -) ............................................................
5 ( -) ............................................................
//
0 ( 1086) GNMSVLLRSLPGETEFLNSSA
1 ( 1086) GNMSVLLRSLPGETEFLNSSA
2 ( 1045) GNMSVLLRSLPGETEFLNSSA
3 ( 958) GNMSVLLRSLPGETEFLNSSA
4 ( -) .....................
5 ( -) .....................
//
