# 0 Query: pF1KB7307, 1706 aa
# 1 CCDS3123.1 XRN1 gene_id:54464|Hs108|chr3 (1706 aa)
# 2 CCDS63801.1 XRN1 gene_id:54464|Hs108|chr3 (1694 aa)
# 3 CCDS75028.1 XRN1 gene_id:54464|Hs108|chr3 (459 aa)
# 4 CCDS13144.1 XRN2 gene_id:22803|Hs108|chr20 (950 aa)
//
exp sw-scr id% from to
1 0 11598 100.0 1 1706
2 0 11450 99.2 1 1694
3 1.3e-131 3050 98.9 1 454
4 4.8e-20 1609 40.1 1 677
//
0 ( 1) MGVPKFYRWISERYP-----CLSEVVKEH---QIP-----------EFDNLYLDMNGIIH
1 ( 1) MGVPKFYRWISERYP-----CLSEVVKEH---QIP-----------EFDNLYLDMNGIIH
2 ( 1) MGVPKFYRWISERYP-----CLSEVVKEH---QIP-----------EFDNLYLDMNGIIH
3 ( 1) MGVPKFYRWISERYP-----CLSEVVKEH---QIP-----------EFDNLYLDMNGIIH
4 ( 1) MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIH
//
0 ( 42) QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR
1 ( 42) QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR
2 ( 42) QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR
3 ( 42) QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR
4 ( 61) PCTHPEDKPAP--KNEDEMMVAIFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQQRSRR
//
0 ( 102) FRSAKEA------EDKIKKAI-EKGETLPTEA---RFDSNCITPGTEFMARLHEHLKYFV
1 ( 102) FRSAKEA------EDKIKKAI-EKGETLPTEA---RFDSNCITPGTEFMARLHEHLKYFV
2 ( 102) FRSAKEA------EDKIKKAI-EKGETLPTEA---RFDSNCITPGTEFMARLHEHLKYFV
3 ( 102) FRSAKEA------EDKIKKAI-EKGETLPTEA---RFDSNCITPGTEFMARLHEHLKYFV
4 ( 119) FRASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYI
//
0 ( 152) NMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLIM
1 ( 152) NMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLIM
2 ( 152) NMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLIM
3 ( 152) NMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLIM
4 ( 179) ADRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIM
//
0 ( 212) LGLTSHEAHFSLLREEVR------------FG--------------GKKTQRV----CAP
1 ( 212) LGLTSHEAHFSLLREEVR------------FG--------------GKKTQRV----CAP
2 ( 212) LGLTSHEAHFSLLREEVR------------FG--------------GKKTQRV----CAP
3 ( 212) LGLTSHEAHFSLLREEVR------------FG--------------GKKTQRV----CAP
4 ( 239) LGLATHEPNFTIIREEFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCA-
//
0 ( 242) EETTFHLLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLH
1 ( 242) EETTFHLLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLH
2 ( 242) EETTFHLLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLH
3 ( 242) EETTFHLLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLH
4 ( 298) -EGEFIFLRLNVLREYLERELTM--ASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLE
//
0 ( 302) INHDALPLLYGTYVTILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVFVDLKWF
1 ( 302) INHDALPLLYGTYVTILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVFVDLKWF
2 ( 302) INHDALPLLYGTYVTILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVFVDLKWF
3 ( 302) INHDALPLLYGTYVTILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVFVDLKWF
4 ( 355) IRENAIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSF
//
0 ( 362) E--SKVGNKYLNE------AAGVAAEEA---RN----------YKEKKKLKGQENS----
1 ( 362) E--SKVGNKYLNE------AAGVAAEEA---RN----------YKEKKKLKGQENS----
2 ( 362) E--SKVGNKYLNE------AAGVAAEEA---RN----------YKEKKKLKGQENS----
3 ( 362) E--SKVGNKYLNE------AAGVAAEEA---RN----------YKEKKKLKGQENS----
4 ( 415) RRRQKEKRKRMKRDQPAFTPSGILTPHALGSRNSPGSQVASNPRQAAYEMRMQNNSSPSI
//
0 ( 397) ---LCWTALDKNEGEMITSKDNLED---ETEDDDLFETEFRQYKRTYYMTKMGVDVVSDD
1 ( 397) ---LCWTALDKNEGEMITSKDNLED---ETEDDDLFETEFRQYKRTYYMTKMGVDVVSDD
2 ( 397) ---LCWTALDKNEGEMITSKDNLED---ETEDDDLFETEFRQYKRTYYMTKMGVDVVSDD
3 ( 397) ---LCWTALDKNEGEMITSKDNLED---ETEDDDLFETEFRQYKRTYYMTKMGVDVVSEY
4 ( 475) SPNTSFTS-DGSPSPLGGIKRKAEDSDSEPEPEDNVRLWEAGWKQRYYKNKFDVDAADEK
//
0 ( 451) FLADQAACYVQAIQWILHYYYHGVQSWSWYYPYHYAPFLSDIHNISTLKIHFELG-KPFK
1 ( 451) FLADQAACYVQAIQWILHYYYHGVQSWSWYYPYHYAPFLSDIHNISTLKIHFELG-KPFK
2 ( 451) FLADQAACYVQAIQWILHYYYHGVQSWSWYYPYHYAPFLSDIHNISTLKIHFELG-KPFK
3 ( 451) VFAN........................................................
4 ( 534) FRRKVVQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKPFK
//
0 ( 510) PFEQLLAVLPAASKNLLPACYQHLMTNEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFI
1 ( 510) PFEQLLAVLPAASKNLLPACYQHLMTNEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFI
2 ( 510) PFEQLLAVLPAASKNLLPACYQHLMTNEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFI
3 ( -) ............................................................
4 ( 594) PLEQLMGVFPAASGNFLPPSWRKLMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFV
//
0 ( 570) DEKRLLEAMETCNHSLKKEERKRNQHSECLMCWYDRDTEFIYPSPWPEKFPAIERCCTRY
1 ( 570) DEKRLLEAMETCNHSLKKEERKRNQHSECLMCWYDRDTEFIYPSPWPEKFPAIERCCTRY
2 ( 570) DEKRLLEAMETCNHSLKKEERKRNQHSECLMCWYDRDTEFIYPSPWPEKFPAIERCCTRY
3 ( -) ............................................................
4 ( 654) DERRLRAALEEVYPDLTPEETRRN....................................
//
0 ( 630) KIISLDAWRVDINKNKITRIDQKALYFCGFPTLKHIRHKFFLKKSGVQVFQQSSRGENMM
1 ( 630) KIISLDAWRVDINKNKITRIDQKALYFCGFPTLKHIRHKFFLKKSGVQVFQQSSRGENMM
2 ( 630) KIISLDAWRVDINKNKITRIDQKALYFCGFPTLKHIRHKFFLKKSGVQVFQQSSRGENMM
3 ( -) ............................................................
4 ( -) ............................................................
//
0 ( 690) LEILVDAESDELTVENVASSVLGKSVFVNWPHLEEARVVAVSDGETKFYLEEPPGTQKLY
1 ( 690) LEILVDAESDELTVENVASSVLGKSVFVNWPHLEEARVVAVSDGETKFYLEEPPGTQKLY
2 ( 690) LEILVDAESDELTVENVASSVLGKSVFVNWPHLEEARVVAVSDGETKFYLEEPPGTQKLY
3 ( -) ............................................................
4 ( -) ............................................................
//
0 ( 750) SGRTAPPSKVVHLGDKEQSNWAKEVQGISEHYLRRKGIIINETSAVVYAQLLTGRKYQIN
1 ( 750) SGRTAPPSKVVHLGDKEQSNWAKEVQGISEHYLRRKGIIINETSAVVYAQLLTGRKYQIN
2 ( 750) SGRTAPPSKVVHLGDKEQSNWAKEVQGISEHYLRRKGIIINETSAVVYAQLLTGRKYQIN
3 ( -) ............................................................
4 ( -) ............................................................
//
0 ( 810) QNGEVRLEKQWSKQVVPFVYQTIVKDIRAFDSRFSNIKTLDDLFPLRSMVFMLGTPYYGC
1 ( 810) QNGEVRLEKQWSKQVVPFVYQTIVKDIRAFDSRFSNIKTLDDLFPLRSMVFMLGTPYYGC
2 ( 810) QNGEVRLEKQWSKQVVPFVYQTIVKDIRAFDSRFSNIKTLDDLFPLRSMVFMLGTPYYGC
3 ( -) ............................................................
4 ( -) ............................................................
//
0 ( 870) TGEVQDSGDVITEGRIRVIFSIPCEPNLDALIQNQHKYSIKYNPGYVLASRLGVSGYLVS
1 ( 870) TGEVQDSGDVITEGRIRVIFSIPCEPNLDALIQNQHKYSIKYNPGYVLASRLGVSGYLVS
2 ( 870) TGEVQDSGDVITEGRIRVIFSIPCEPNLDALIQNQHKYSIKYNPGYVLASRLGVSGYLVS
3 ( -) ............................................................
4 ( -) ............................................................
//
0 ( 930) RFTGSIFIGRGSRRNPHGDHKANVGLNLKFNKKNEEVPGYTKKVGSEWMYSSAAEQLLAE
1 ( 930) RFTGSIFIGRGSRRNPHGDHKANVGLNLKFNKKNEEVPGYTKKVGSEWMYSSAAEQLLAE
2 ( 930) RFTGSIFIGRGSRRNPHGDHKANVGLNLKFNKKNEEVPGYTKKVGSEWMYSSAAEQLLAE
3 ( -) ............................................................
4 ( -) ............................................................
//
0 ( 990) YLERAPELFSYIAKNSQEDVFYEDDIWPGENENGAEKVQEIITWLKGHPVSTLSRSSCDL
1 ( 990) YLERAPELFSYIAKNSQEDVFYEDDIWPGENENGAEKVQEIITWLKGHPVSTLSRSSCDL
2 ( 990) YLERAPELFSYIAKNSQEDVFYEDDIWPGENENGAEKVQEIITWLKGHPVSTLSRSSCDL
3 ( -) ............................................................
4 ( -) ............................................................
//
0 ( 1050) QILDAAIVEKIEEEVEKCKQRKNNKKVRVTVKPHLLYRPLEQQHGVIPDRDAEFCLFDRV
1 ( 1050) QILDAAIVEKIEEEVEKCKQRKNNKKVRVTVKPHLLYRPLEQQHGVIPDRDAEFCLFDRV
2 ( 1050) QILDAAIVEKIEEEVEKCKQRKNNKKVRVTVKPHLLYRPLEQQHGVIPDRDAEFCLFDRV
3 ( -) ............................................................
4 ( -) ............................................................
//
0 ( 1110) VNVRENFSVPVGLRGTIIGIKGANREADVLFEVLFDEEFPGGLTIRCSPGRGYRLPTSAL
1 ( 1110) VNVRENFSVPVGLRGTIIGIKGANREADVLFEVLFDEEFPGGLTIRCSPGRGYRLPTSAL
2 ( 1110) VNVRENFSVPVGLRGTIIGIKGANREADVLFEVLFDEEFPGGLTIRCSPGRGYRLPTSAL
3 ( -) ............................................................
4 ( -) ............................................................
//
0 ( 1170) VNLSHGSRSETGNQKLTAIVKPQPAVHQHSSSSSVSSGHLGALNHSPQSLFVPTQVPTKD
1 ( 1170) VNLSHGSRSETGNQKLTAIVKPQPAVHQHSSSSSVSSGHLGALNHSPQSLFVPTQVPTKD
2 ( 1170) VNLSHGSRSETGNQKLTAIVKPQPAVHQHSSSSSVSSGHLGALNHSPQSLFVPTQVPTKD
3 ( -) ............................................................
4 ( -) ............................................................
//
0 ( 1230) DDEFCNIWQSLQGSGKMQYFQPTIQEKGAVLPQEISQVNQHHKSGFNDNSVKYQQRKHDP
1 ( 1230) DDEFCNIWQSLQGSGKMQYFQPTIQEKGAVLPQEISQVNQHHKSGFNDNSVKYQQRKHDP
2 ( 1230) DDEFCNIWQSLQGSGKMQYFQPTIQEKGAVLPQEISQVNQHHKSGFNDNSVKYQQRKHDP
3 ( -) ............................................................
4 ( -) ............................................................
//
0 ( 1290) HRKFKEECKSPKAECWSQKMSNKQPNSGIENFLASLNISKENEVQSSHHGEPPSEEHLSP
1 ( 1290) HRKFKEECKSPKAECWSQKMSNKQPNSGIENFLASLNISKENEVQSSHHGEPPSEEHLSP
2 ( 1290) HRKFKEECKSPKAECWSQKMSNKQPNSGIENFLASLNISKENEVQSSHHGEPPSEEHLSP
3 ( -) ............................................................
4 ( -) ............................................................
//
0 ( 1350) QSFAM-GTRMLKEILKIDGSNTVDHKNEIKQIANEIPVSSNRRDEYGLPSQPKQNKKLAS
1 ( 1350) QSFAM-GTRMLKEILKIDGSNTVDHKNEIKQIANEIPVSSNRRDEYGLPSQPKQNKKLAS
2 ( 1350) QSFAMKGTRMLKEILKIDGSNTVDHKNEIKQIANEIPVSSNRRDEYGLPSQPKQNKKLAS
3 ( -) ............................................................
4 ( -) ............................................................
//
0 ( 1409) YMNKPHSANEYHNVQSMDNMCWPAPSQIPPVSTPVTELSRICSLVGMPQPDFSFLRMPQT
1 ( 1409) YMNKPHSANEYHNVQSMDNMCWPAPSQIPPVSTPVTELSRICSLVGMPQPDFSFLRMPQT
2 ( 1410) YMNKPHSANEYHNVQSMDNMCWPAPSQIPPVSTPVTELSRICSLVGMPQPDFSFLRMPQT
3 ( -) ............................................................
4 ( -) ............................................................
//
0 ( 1469) MTVCQVKLSNGLLVHGPQCHSENEAKEKAALFALQQLGSLGMNFPLPSQVFANYPSAVPP
1 ( 1469) MTVCQVKLSNGLLVHGPQCHSENEAKEKAALFALQQLGSLGMNFPLPSQVFANYPSAVPP
2 ( 1470) MTVCQVKLSNGLLVHGPQCHSENEAKEKAALFALQQLGSLGMNFPLPSQVFANYPSAVPP
3 ( -) ............................................................
4 ( -) ............................................................
//
0 ( 1529) GTIPPAFPPPTGWDHYGSNYALGAANIMPSSSHLFGSMPWGPSVPVPGKPFHHTLYSGTM
1 ( 1529) GTIPPAFPPPTGWDHYGSNYALGAANIMPSSSHLFGSMPWGPSVPVPGKPFHHTLYSGTM
2 ( 1530) GTIPPAFPPPT-------------ANIMPSSSHLFGSMPWGPSVPVPGKPFHHTLYSGTM
3 ( -) ............................................................
4 ( -) ............................................................
//
0 ( 1589) PMAGGIPGGVHNQFIPLQVTKKRVANKKNFENKEAQSSQATPVQTSQPDSSNIVKVSPRE
1 ( 1589) PMAGGIPGGVHNQFIPLQVTKKRVANKKNFENKEAQSSQATPVQTSQPDSSNIVKVSPRE
2 ( 1577) PMAGGIPGGVHNQFIPLQVTKKRVANKKNFENKEAQSSQATPVQTSQPDSSNIVKVSPRE
3 ( -) ............................................................
4 ( -) ............................................................
//
0 ( 1649) SSSASLKSSPIAQPASSFQVETASQGHSISHHKSTPISSSRRKSRKLAVNFGVSKPSE
1 ( 1649) SSSASLKSSPIAQPASSFQVETASQGHSISHHKSTPISSSRRKSRKLAVNFGVSKPSE
2 ( 1637) SSSASLKSSPIAQPASSFQVETASQGHSISHHKSTPISSSRRKSRKLAVNFGVSKPSE
3 ( -) ..........................................................
4 ( -) ..........................................................
//
