# 0 Query: pF1KB0087, 1140 aa
# 1 CCDS31576.1 DDB1 gene_id:1642|Hs108|chr11 (1140 aa)
# 2 CCDS10894.1 SF3B3 gene_id:23450|Hs108|chr16 (1217 aa)
# 3 CCDS34966.1 CPSF1 gene_id:29894|Hs108|chr8 (1443 aa)
//
exp sw-scr id% from to
1 0 7452 100.0 1 1140
2 1.7e-19 848 23.4 18 1197
3 1.9e-11 312 21.7 931 1435
//
0 ( 1) MSYNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEG--LRPVKEVGMY
1 ( 1) MSYNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEG--LRPVKEVGMY
2 ( 18) ..................IHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVF
3 ( -) ............................................................
//
0 ( 59) GKIAVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIG-RPSE
1 ( 59) GKIAVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIG-RPSE
2 ( 60) GVIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQPSK---NMFEKIHQETFGKSGCRRIV
3 ( -) ............................................................
//
0 ( 118) TGIIGIIDPECRMIGLRLYDGLFKVIPLDRD-------NKELKAFNIRLEELHVI--DVK
1 ( 118) TGIIGIIDPECRMIGLRLYDGLFKVIPLDRD-------NKELKAFNIRLEELHVI--DVK
2 ( 117) PGQFLAVDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVG
3 ( -) ............................................................
//
0 ( 169) F---LYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKGPWK-----QENVEAEASMVI
1 ( 169) F---LYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKGPWK-----QENVEAEASMVI
2 ( 177) FENPMFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLI
3 ( -) ............................................................
//
0 ( 221) AVP---EPFGGAIIIGQESITYHN-GDKYLAIAPPIIKQST----------IVCHNRVDP
1 ( 221) AVP---EPFGGAIIIGQESITYHN-GDKYLAIAPPIIKQST----------IVCHNRVDP
2 ( 237) TVPGGSDGPSGVLICSENYITYKNFGDQP-DIRCPIPRRRNDLDDPERGMIFVCSATHKT
3 ( -) ............................................................
//
0 ( 267) NGSRYLLGDME-GRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNGVVFVG
1 ( 267) NGSRYLLGDME-GRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNGVVFVG
2 ( 296) KSMFFFLAQTEQGDIFKITLETDEDM---VT--EIRLKYFDTVPVAAAMCVLKTGFLFVA
3 ( -) ............................................................
//
0 ( 326) SRLGDSQLVKLNV--DSNEQGSYVVAM-----ETF----------------TNLGPIVDM
1 ( 326) SRLGDSQLVKLNV--DSNEQGSYVVAM-----ETF----------------TNLGPIVDM
2 ( 351) SEFGNHYLYQIAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILFC
3 ( -) ............................................................
//
0 ( 363) CVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGI-KGLWPLRSDPNRET
1 ( 363) CVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGI-KGLWPLRSDPNRET
2 ( 411) QIADLANEDTPQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEF
3 ( -) ............................................................
//
0 ( 422) DDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVSQ
1 ( 422) DDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVSQ
2 ( 471) DAYIIVSFVNATLVLSI-GETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRA
3 ( -) ............................................................
//
0 ( 482) EPKALVSEWKEPQAKNISVASCNSSQVVVAV-GRALYYLQIHPQ-ELRQISHT-EMEHEV
1 ( 482) EPKALVSEWKEPQAKNISVASCNSSQVVVAV-GRALYYLQIHPQ-ELRQISHT-EMEHEV
2 ( 530) DKR--VNEWKTPGKKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADV
3 ( -) ............................................................
//
0 ( 539) ACLDITPLGDSNGLSPLCAIGLWTDISARILKL-PSFELLHKEMLGGEIIPRSILMTTFE
1 ( 539) ACLDITPLGDSNGLSPLCAIGLWTDISARILKL-PSFELLHKEMLGGEIIPRSILMTTFE
2 ( 588) VCMSLANVPPGEQRSRFLAVGL-VDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMG
3 ( -) ............................................................
//
0 ( 598) SSH--------------YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRS
1 ( 598) SSH--------------YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRS
2 ( 647) GTEKQDELGERGSIGFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRM
3 ( 931) ......................................................FRYFED
//
0 ( 644) L-STTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIG
1 ( 644) L-STTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIG
2 ( 707) Q-GQEAVLAMSSRSWLSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRIL
3 ( 937) IYGYSGVFICGPSP-------HWLLVTG---RGALRLHPMAIDGPVDSFAPFHNVNCPRG
//
0 ( 703) TI--DEIQKLHIRTV-PLY---ESPRKICYQEVSQCFGVLSSR-------IEVQDTSGGT
1 ( 703) TI--DEIQKLHIRTV-PLY---ESPRKICYQEVSQCFGVLSSR-------IEVQDTSGGT
2 ( 766) AL--EKLGAVFNQVAFPLQ---YTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMA
3 ( 987) FLYFNRQGELRISVL-PAYLSYDAPWPVRKIPLRCTAHYVAYH-------VESKVYAVAT
//
0 ( 750) TALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHN-----LLIIDQHTFEVL-H
1 ( 750) TALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHN-----LLIIDQHTFEVL-H
2 ( 821) EEMVEAAGEDERELAAEMAAAFLNENLP-ESIFGAPKAGNGQWASVIRVMNPIQGNTL-D
3 ( 1039) STNTPCARIPRMTGE---EKEFET-IERDERYIHPQQEAFS-----IQLISPVSWEAIPN
//
0 ( 804) AHQFLQN-EYALSLVSCKLGKDPNT-----YFI-VGTA---MVYPEEAEPKQGRIVVFQY
1 ( 804) AHQFLQN-EYALSLVSCKLGKDPNT-----YFI-VGTA---MVYPEEAEPKQGRIVVFQY
2 ( 879) LVQLEQN-EAAFSVAVCRFSNTGED-----WYVLVGVAKDLILNPRSVA--GGFVYTYKL
3 ( 1090) ARIELQEWEHVTCMKTVSLRSEETVSGLKGYVA-AGTC---LMQGEEVTCR-GRILIMDV
//
0 ( 854) -----------SDG-KLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELRT
1 ( 854) -----------SDG-KLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELRT
2 ( 931) V----------NNGEKLEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRK
3 ( 1145) IEVVPEPGQPLTKN-KFKVLYEKEQKGPVTALCHCNGHLVSAIGQ--KIFLWSLRASELT
//
0 ( 902) -ECNHYNNIMALY-LKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEI
1 ( 902) -ECNHYNNIMALY-LKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEI
2 ( 981) CENKHIANYIS-G-IQTIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASL
3 ( 1202) -GMAFIDTQLYIHQMISVKNFILAADVMKSISLLRYQEESKTLSLVSRDAKPLEVYSVDF
//
0 ( 960) LDDD---NFLGAENAFNLFVCQ--KDSAATTDEE---RQHLQEVGLFH----LGEFVNVF
1 ( 960) LDDD---NFLGAENAFNLFVCQ--KDSAATTDEE---RQHLQEVGLFH----LGEFVNVF
2 ( 1039) LDYD---TVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNY
3 ( 1261) MVDNAQLGFLVSDRDRNLMVYM--YLPEAKESFG---GMRLLRRADFH----VGAHVNTF
//
0 ( 1008) ----CHGSLVMQNLGETSTPTQGS--VL--FGTVNGMIG-LVTSLSESWYNLLLDMQNRL
1 ( 1008) ----CHGSLVMQNLGETSTPTQGS--VL--FGTVNGMIG-LVTSLSESWYNLLLDMQNRL
2 ( 1096) ----HVGETVL-SLQKTTLIPGGSESLV--YTTLSGGIGILVPFTSHEDHDFFQHVEMHL
3 ( 1312) WRTPCRGAT--EGLSKKSVVWENK--HITWFATLDGGIG-LLLPMQEKTYRRLLMLQNAL
//
0 ( 1059) NKVIKSVGKIEHSFWRSFHTERKT--EPATGFIDGDLIESFLDISRPKMQEVVANLQYDD
1 ( 1059) NKVIKSVGKIEHSFWRSFHTERKT--EPATGFIDGDLIESFLDISRPKMQEVVANLQYDD
2 ( 1149) RSEHPPLCGRDHLSFRSYYF-------PVKNVIDGDLCEQFNSMEPNKQKNVSEEL....
3 ( 1367) TTMLPHHAGLNPRAFRMLHVDRRTLQNAVRNVLDGELLNRYLYLSTMERSELAKKI----
//
0 ( 1117) GSGMKREATADDLIKVVEELTRIH
1 ( 1117) GSGMKREATADDLIKVVEELTRIH
2 ( -) ........................
3 ( 1423) --GTTPDIILDDLLE.........
//
