information on T3E15
(100184..100264)
Direction: +
Frame: 2
ORF
100070..101212 (Met: 100472 100487 100514 100550 100643 100727 100757 100769 100787 101207)
RAHGSVPQTSQNPQRRKHLCRRLGSSRLHVRSFRQKNYPGRRNRTPEHRPNGQTRWDENT
LKHHPVARALAAAAEIGAAEEEPELGTPEQPTSYKPEPYNDLRIPIIDYIERGITPPDKW
ETRKLKAQSAGYCIMEGRLMKRNIAGPYMVCTYGQQTKDLMKSKREGQCGSHCSGRTLAL
RVKKQGYFWPTMLADCIAHSLRCDKCQRHAPALHQPPEEMSSISSPYPFMKWSMDVVGPM
EASGGKKRLKNLLVLTDYSTKWIEAKSFQQVTEKQVEDFVWENIICRHGIPYEIVTDNGT
NLTSGKIKAFCDKWKIRLTTSTPRYPQGRQKPPTKLYLTTSRKDLIPKNQCGPTCSTEFS
GPNELHLASQHKKHCSLSPMV
GenBank annotation
None
BLASTX cluster
93864..101553 cluster 33 75 hits for protein gene
BLASTN cluster
None
GENSCAN
93864..101613 gene model 26
Suboptimal exon
100114..101051 Intr Phase: 2 Score: 0.209
100178..101051 Intr Phase: 0 Score: 0.261
Grail
Shadow exon
100782..100879 exon Phase: 1 Score: 37
Exon-Intron boundary candidatates
Acceptor |
100195 [0.002] (2) |
100201 [0.004] (2) |
100284 [0.015] (1) |
100287 [0.007] (1) |
100299 [0.005] (1) |
100506 [0.006] (1) |
100662 [0.003] (1) |
100675 [0.063] (2) |
100763 [0.006] (0) |
100782 [0.283] (1) |
100880 [0.048] (0) |
Donor |
100156 [0.124] (0) |
100347 [0.013] (2) |
100362 [0.005] (2) |
100461 [0.061] (2) |
100505 [0.102] (1) |
100516 [0.004] (0) |
100577 [0.007] (1) |
100674 [0.063] (2) |
100799 [0.007] (1) |
100879 [0.88N/0.456] (0) |
100906 [0.004] (0) |
101051 [0.92N/0.926] (1) |
101174 [0.007] (1) |
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Entrance