information on F19B15
(27379..27194)
Direction: -
Frame: 3
ORF
28546..26480 (Met: 28528 28513 28486 28342 28036 27781 27565 27538 27385 27340 27226 27046 26884 26824 26662)
PKKEKLMVRSFMRGKKNCKTMKFFVLVLLLVLQFFSNKALSQSEEGEFGFNGYLYDNSGI
AITNSKGLMKLTNSSEFSYGHVFYNSPVRFKNSPNGTVSSFSTTFVFAIVSNVNALDGHG
LAFVISPTKGLPYSSSSQYLGLFNLTNNGDPSNHIVAVEFDTFQNQEFDDMDNNHVGIDI
NSLSSEKASTAGYYEDDDGTFKNIRLINQKPIQAWIEYDSSRRQLNVTIHPIHLPKPKIP
LLSLTKDLSPYLFDSMYVGFTSATGRLRSSHYILGWTFKLNGTASNIDISRLPKLPRDSR
STSVKKILAISLSLTSLAILVFLTISYMLFLKRKKLMEVLEDWEVQFGPHRFAYKDLYIA
TKGFRNSELLGKGGFGKVYKGTLSTSNMDIAVKKVSHDSRQGMREFVAEIATIGRLRHPN
LVRLLGYCRRKGELYLVYDCMPKGSLDKFLYHQPEQSLDWSQRFKIIKDVASGLCYLHHQ
WVQVIIHRDIKPANVLLDDSMNGKLGDFGLAKLCEHGFDPQTSNVAGTFGYISPELSRTG
KASTSSDVFAFGILMLEITCGRRPVLPRASSPSEMVLTDWVLDCWEDDILQVVDERVKQD
DKYLEEQVALVLKLGLFCSHPVAAVRPSMSSVIQFLDGVAQLPNNLFDIVKARENVGAIE
GFGEAAESLAEPCSVATLTFTEPFVSHGR
GenBank annotation
28486..26477 F19B15.80
BLASTX cluster
28268..26536 cluster 4 115 hits for protein gene
BLASTN cluster
27427..27094 cluster 7 1 hits for EST
GENSCAN
28486..26480 gene model 7
Suboptimal exon
28513..26480 Sngl Phase: 0 Score: 0.167
Grail
28513..26477 exon Phase: 0 Score: 98
Exon-Intron boundary candidatates
Acceptor |
26502 [0.010] (1) |
26550 [0.004] (1) |
26565 [0.020] (1) |
26588 [0.008] (2) |
26592 [0.004] (1) |
26676 [0.012] (1) |
26707 [0.002] (0) |
26749 [0.026] (0) |
26858 [0.001] (2) |
26877 [0.004] (1) |
26928 [0.047] (1) |
27010 [0.001] (0) |
27083 [0.064] (2) |
27216 [0.001] (1) |
27260 [0.108] (2) |
27321 [0.041] (1) |
27347 [0.001] (2) |
27405 [0.002] (1) |
27446 [0.002] (2) |
27452 [0.014] (2) |
27494 [0.077] (2) |
27508 [0.001] (0) |
27522 [0.005] (1) |
27548 [0.012] (2) |
27599 [0.004] (2) |
27614 [0.001] (2) |
27684 [0.001] (1) |
27753 [0.031] (1) |
27759 [0.016] (1) |
27972 [0.101] (1) |
27975 [0.002] (1) |
27990 [0.002] (1) |
28001 [0.023] (2) |
28074 [0.039] (1) |
28125 [0.004] (1) |
28218 [0.002] (1) |
28284 [0.71N/0.004] (1) |
28420 [0.002] (0) |
28467 [0.004] (1) |
Donor |
26635 [0.015] (1) |
26759 [0.009] (0) |
26822 [0.135] (0) |
26968 [0.480] (1) |
26997 [0.016] (2) |
27098 [0.004] (0) |
27229 [0.009] (1) |
27406 [0.88N/0.559] (1) |
27416 [0.003] (0) |
27426 [0.014] (2) |
27436 [0.059] (1) |
27495 [0.030] (2) |
27780 [0.005] (2) |
27952 [0.101] (1) |
27973 [0.235] (1) |
28261 [0.99N/0.031] (1) |
28386 [0.003] (2) |
28393 [0.011] (1) |
28526 [0.052] (0) |
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Entrance