information on F19B15
(24564..25795)
Direction: +
Frame: 3
ORF
24543..25876 (Met: 24585 24597 25004 25070 25320 25593 25796 24804 24821 24844 24984 25091 25102 25149 25157 25276 25281 25307 25315 25329 25358 25411 25605 25658 25741 25746)
VLSVVGILQDEVDPMVSVMKVEKAPLESYADIGGLEAQIQEIKEAVELPLTHPELYEDIG
IKPPKGVILYGEPGTGKTLLAKVCLCT*SNEY*FVCSIA*YYLTCQLHSVNRLFGQRPDL
CCAAGHLDFIRLNIARNLFSWIRIF*HLFLLMSSFLVSLCHKHEIVAIWWCYLMGISSLT
*LF*GCEFNISYFLESCW*S*QKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKR*
*YFHKPDL*H*MVI*TCCLKEQV*LTQEVNVRSKELCWNF*QLDGFDSRGDVKVILATNR
IESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQVIYNSTEMANQ*CSKLSCSLRLWVLFI
K*THIEDDSLGRCKPRRVCDDERRVLRS**AICTEAGLLALRERRMKVETLNHLVQAHTN
THTHTTWAITSH
GenBank annotation
23976..25993 F19B15.70
BLASTX cluster
23976..25822 cluster 3 91 hits for protein gene
BLASTN cluster
23973..26138 cluster 6 6 hits for EST
24541..24763 cluster 5 1 hits for EST
GENSCAN
21922..25990 gene model 6
Grail
24543..24806 exon Phase: 0 Score: 90
25355..25571 exon Phase: 2 Score: 90
Exon-Intron boundary candidatates
Acceptor |
24543 [0.95N/0.596] (0) |
24571 [0.003] (1) |
24577 [0.005] (1) |
24643 [0.001] (1) |
24652 [0.003] (1) |
24657 [0.010] (0) |
24663 [0.003] (0) |
24715 [0.001] (1) |
24837 [0.112] (0) |
24842 [0.011] (2) |
24877 [0.95N/0.115] (1) |
24899 [0.045] (2) |
24904 [0.002] (1) |
25105 [0.96N/0.434] (1) |
25127 [0.002] (2) |
25152 [0.003] (0) |
25165 [0.004] (1) |
25209 [0.002] (0) |
25247 [0.001] (2) |
25350 [1.00N/0.014] (0) |
25355 [1.00N/0.933] (2) |
25372 [0.006] (1) |
25452 [0.003] (0) |
25472 [0.034] (2) |
25520 [0.001] (2) |
25572 [0.002] (0) |
25661 [0.86N/0.343] (2) |
25751 [0.002] (2) |
25786 [0.002] (1) |
25802 [0.001] (2) |
25824 [0.001] (0) |
Donor |
24706 [0.009] (2) |
24740 [0.004] (0) |
24753 [0.005] (1) |
24788 [1.00N/0.890] (0) |
24921 [0.009] (1) |
25191 [0.008] (1) |
25264 [0.006] (2) |
25274 [1.00N/0.890] (0) |
25354 [0.036] (2) |
25374 [0.004] (1) |
25380 [0.035] (1) |
25451 [0.004] (0) |
25571 [1.00N/0.925] (0) |
25793 [0.015] (0) |
25801 [1.00N/0.138] (2) |
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