information on F19B15
(24270..25795)
Direction: +
Frame: 3
ORF
23838..25876 (Met: 23847 23976 24204 24303 24438 24571 25004 25070 25320 25593 25796 24468 24488 24595 24804 24821 24844 24984 25091 25102 25149 25157 25276 25281 25307 25315 25329 25358 25411 25605 25658 25741 25746)
YLYMGLSQRLKKKHFFFPKPENISTRVQERKKGTSNSEKLREERRIMGQGPSGGLNRQGD
RKPDGGDKKEKKFEPAAPPARVGRKQRKQKGPEAAARLPTVTPSTKCKLRLLKLERIKDY
LLMEEEFVANQERLKPQEEKAEEDRSKVDDLRGTPMSVGNLEELIDENHAIVSSSVGPEY
YVGILSFVDKDQLEPGCSILMHNKVCEIRV*ILFLL*TIVCCCGFRVADLFYVRFSLLLG
FYKMKWIQWCL*KVEKAPLESYADIGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKGV
ILYGEPGTGKTLLAKVCLCT*SNEY*FVCSIA*YYLTCQLHSVNRLFGQRPDLCCAAGHL
DFIRLNIARNLFSWIRIF*HLFLLMSSFLVSLCHKHEIVAIWWCYLMGISSLT*LF*GCE
FNISYFLESCW*S*QKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKR**YFHKPD
L*H*MVI*TCCLKEQV*LTQEVNVRSKELCWNF*QLDGFDSRGDVKVILATNRIESLDPA
LLRPGRIDRKIEFPLPDIKTRRRIFQVIYNSTEMANQ*CSKLSCSLRLWVLFIK*THIED
DSLGRCKPRRVCDDERRVLRS**AICTEAGLLALRERRMKVETLNHLVQAHTNTHTHTTW
AITSH
GenBank annotation
23976..25993 F19B15.70
BLASTX cluster
23976..25822 cluster 3 91 hits for protein gene
BLASTN cluster
23973..26138 cluster 6 6 hits for EST
24541..24763 cluster 5 1 hits for EST
GENSCAN
21922..25990 gene model 6
Suboptimal exon
23976..24449 Init Phase: 0 Score: 0.531
Grail
23847..24470 exon Phase: 0 Score: 99
24543..24806 exon Phase: 0 Score: 90
25355..25571 exon Phase: 2 Score: 90
Exon-Intron boundary candidatates
| Acceptor |
| 23895 [0.003] (0) |
23899 [0.006] (1) |
23909 [0.010] (2) |
24085 [0.055] (1) |
| 24210 [0.004] (0) |
24214 [0.001] (1) |
24249 [0.003] (0) |
24409 [0.004] (1) |
| 24414 [0.002] (0) |
24464 [0.001] (2) |
24519 [0.61N/0.261] (0) |
24543 [0.95N/0.596] (0) |
| 24571 [0.003] (1) |
24577 [0.005] (1) |
24643 [0.001] (1) |
24652 [0.003] (1) |
| 24657 [0.010] (0) |
24663 [0.003] (0) |
24715 [0.001] (1) |
24837 [0.112] (0) |
| 24842 [0.011] (2) |
24877 [0.95N/0.115] (1) |
24899 [0.045] (2) |
24904 [0.002] (1) |
| 25105 [0.96N/0.434] (1) |
25127 [0.002] (2) |
25152 [0.003] (0) |
25165 [0.004] (1) |
| 25209 [0.002] (0) |
25247 [0.001] (2) |
25350 [1.00N/0.014] (0) |
25355 [1.00N/0.933] (2) |
| 25372 [0.006] (1) |
25452 [0.003] (0) |
25472 [0.034] (2) |
25520 [0.001] (2) |
| 25572 [0.002] (0) |
25661 [0.86N/0.343] (2) |
25751 [0.002] (2) |
25786 [0.002] (1) |
| 25802 [0.001] (2) |
25824 [0.001] (0) |
| Donor |
| 24137 [0.276] (0) |
24156 [0.928] (1) |
24166 [0.401] (2) |
24278 [0.109] (0) |
| 24294 [0.011] (1) |
24449 [1.00N/0.968] (0) |
24706 [0.009] (2) |
24740 [0.004] (0) |
| 24753 [0.005] (1) |
24788 [1.00N/0.890] (0) |
24921 [0.009] (1) |
25191 [0.008] (1) |
| 25264 [0.006] (2) |
25274 [1.00N/0.890] (0) |
25354 [0.036] (2) |
25374 [0.004] (1) |
| 25380 [0.035] (1) |
25451 [0.004] (0) |
25571 [1.00N/0.925] (0) |
25793 [0.015] (0) |
| 25801 [1.00N/0.138] (2) |
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