Jatropha Genome Database

Jcr4S05837.30  
Related links:
Predicted Sequence Links:
Genome Sequence: Jcr4S05837
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9RVV2_RICCO 188 51.4 59.2 (tr|B9RVV2) Ethylene-responsive transcription factor, putative OS=Ricinus communis GN=RCOM_1173260 PE=4 SV=1
Arabidopsis_pep AT5G44210.1 129 44.3 56.2 | Symbols: ERF9, ATERF9, ATERF-9 | erf domain protein 9 | chr5:17806742-17807344 FORWARD LENGTH=200
soybean_pep Glyma06g44430.1 110 42.7 51.6  
Medicago_pep IMGA|Medtr4g078710.1 122 40.2 53.4 Ethylene-responsive transcription factor 4 (AHRD V1 *-** B6T615_MAIZE); contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF, DNA-binding chr04_pseudomolecule_IMGAG_V3.5 25978403-25977174 E EGN_Mt100125 20100825
grape_pep GSVIVT01021098001 101 60.0 65.6  
castor_bean_cds 29983.m003147 206 88.0 88.0 Ethylene-responsive transcription factor, putative
castor_bean_pep 29983.m003147 188 51.4 59.2 Ethylene-responsive transcription factor, putative
JAT_unigene contig12788 1261 100.0 100.0 length=1022 numreads=44 gene=isogroup07697 status=isotig
A list of protein families, domains and functional sites (searches in InterPro)
Jcr4S05837.30 length: 211 aa.
IPR001471 Pathogenesis-related transcriptional factor/ERF, DNA-binding
method AccNumber shortName E-value location
Molecular Function GO:0003700 sequence-specific DNA binding transcription factor activity    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
FPrintScan PR00367 ETHRSPELEMNT 3.6e-11 30-41
52-68
Gene3D G3DSA:3.30.730.10 no description 4.1e-30 29-87
HMMPfam PF00847 AP2 2.5e-17 29-78
HMMSmart SM00380 no description 1.9e-38 29-92
ProfileScan PS51032 AP2_ERF 23.736 29-86
IPR016177 DNA-binding, integrase-type
Molecular Function GO:0003677 DNA binding    
superfamily SSF54171 DNA-binding 4.7e-24 28-89
no_ID  
Seg seg seg NA 60-73
105-119
174-193