Jatropha Genome Database
- Jcr4S05837.30
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jcr4S05837.30
(636 letters)
Database: JAT_unigene
122,497 sequences; 49,272,789 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
contig12788 length=1022 numreads=44 gene=isogroup07697 statu... 1261 0.0
contig13257 length=965 numreads=19 gene=isogroup08166 status... 504 e-142
contig12131 length=1114 numreads=23 gene=isogroup07040 statu... 82 7e-15
>contig12788 length=1022 numreads=44 gene=isogroup07697
status=isotig
Length = 1022
Score = 1261 bits (636), Expect = 0.0
Identities = 636/636 (100%)
Strand = Plus / Plus
Query: 1 atggctcccaaagagaagagcatcgccgcctccactggcctcaagaaaggtaccattacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 88 atggctcccaaagagaagagcatcgccgcctccactggcctcaagaaaggtaccattacc 147
Query: 61 aacaataacgataagaaggaaatgcattacagaggagttagaaagaggccttggggtcgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 148 aacaataacgataagaaggaaatgcattacagaggagttagaaagaggccttggggtcgt 207
Query: 121 tacgccgccgagatacgggatccggggaagaagagccgggtctggttaggcacttttgat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 tacgccgccgagatacgggatccggggaagaagagccgggtctggttaggcacttttgat 267
Query: 181 acggctgaggaagctgctacagcttatgacaaggcggcgcgtgaattccgtggccctaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 acggctgaggaagctgctacagcttatgacaaggcggcgcgtgaattccgtggccctaag 327
Query: 241 gccaagactaactttcctcttcccaccgaaatcactccgattaaaaccaaggtcgctaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 gccaagactaactttcctcttcccaccgaaatcactccgattaaaaccaaggtcgctaac 387
Query: 301 tgcactgatgacccaagtcctagccagagcagcacggttgaatcctccagtccgccggct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 tgcactgatgacccaagtcctagccagagcagcacggttgaatcctccagtccgccggct 447
Query: 361 gcgcgtgagatcacacacgaccttgtggaaaggtttccgtttgtttatcagcagcagaac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 gcgcgtgagatcacacacgaccttgtggaaaggtttccgtttgtttatcagcagcagaac 507
Query: 421 gtggtgggtccggtttggttttttgatggcagtataagacctgagtttatgactcggcaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 gtggtgggtccggtttggttttttgatggcagtataagacctgagtttatgactcggcaa 567
Query: 481 tttcctgtccggtttgagccagtggggctcgcgtttaatggtgggttagtgagtggtgga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 tttcctgtccggtttgagccagtggggctcgcgtttaatggtgggttagtgagtggtgga 627
Query: 541 agtcagagtgactcagactcgtcatccgtcgttgatggcaaaccagcaagagacttcgat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 agtcagagtgactcagactcgtcatccgtcgttgatggcaaaccagcaagagacttcgat 687
Query: 601 cttaatcttcttccatcggaggaggaagatgcttaa 636
||||||||||||||||||||||||||||||||||||
Sbjct: 688 cttaatcttcttccatcggaggaggaagatgcttaa 723
>contig13257 length=965 numreads=19 gene=isogroup08166
status=isotig
Length = 965
Score = 504 bits (254), Expect = e-142
Identities = 491/570 (86%)
Strand = Plus / Plus
Query: 65 ataacgataagaaggaaatgcattacagaggagttagaaagaggccttggggtcgttacg 124
|||| ||||||||||| ||||||||||||||||| ||||||||||| |||||||||||||
Sbjct: 138 ataatgataagaaggagatgcattacagaggagtcagaaagaggccgtggggtcgttacg 197
Query: 125 ccgccgagatacgggatccggggaagaagagccgggtctggttaggcacttttgatacgg 184
| |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 198 ctgccgagatacgggatccgggaaagaagagccgggtctggttaggcacttttgacacgg 257
Query: 185 ctgaggaagctgctacagcttatgacaaggcggcgcgtgaattccgtggccctaaggcca 244
|||| ||||| || | ||| |||||||||||||||||||| ||||| || |||||||||
Sbjct: 258 ctgaagaagcagcaagagcctatgacaaggcggcgcgtgagttccgcggttctaaggcca 317
Query: 245 agactaactttcctcttcccaccgaaatcactccgattaaaaccaaggtcgctaactgca 304
||||||||||||| | ||| | |||||| || || ||||| |||||||||| ||||| |
Sbjct: 318 agactaactttccccctccaagcgaaataacaccaattaacaccaaggtcgttaactata 377
Query: 305 ctgatgacccaagtcctagccagagcagcacggttgaatcctccagtccgccggctgcgc 364
||||| ||| |||||||||||||| ||||| ||||| ||||| ||||| ||||| ||||
Sbjct: 378 ctgataaccagagtcctagccagagtagcacagttgagtcctcgagtccaccggcagcgc 437
Query: 365 gtgagatcacacacgaccttgtggaaaggtttccgtttgtttatcagcagcagaacgtgg 424
||||| || ||| ||| ||| |||||||||||||||||||||||||||||||||| | |
Sbjct: 438 gtgagctctcacgcgatcttatggaaaggtttccgtttgtttatcagcagcagaaagcag 497
Query: 425 tgggtccggtttggttttttgatggcagtataagacctgagtttatgactcggcaatttc 484
||||| || |||||||||| || || | ||| || || || ||| |||||| | ||| |
Sbjct: 498 tgggtacgatttggtttttggacggaaatattaggcccgaatttgtgactcaccgattcc 557
Query: 485 ctgtccggtttgagccagtggggctcgcgtttaatggtgggttagtgagtggtggaagtc 544
|||| |||||||||||||||||| | | ||| |||| ||| ||| ||||||| |||| ||
Sbjct: 558 ctgttcggtttgagccagtgggggttgagttcaatgatggattaatgagtggaggaactc 617
Query: 545 agagtgactcagactcgtcatccgtcgttgatggcaaaccagcaagagacttcgatctta 604
|||||||||| |||||||| || ||||| ||||| ||||||||||| || |||||||| |
Sbjct: 618 agagtgactcggactcgtcgtctgtcgtggatggaaaaccagcaagggatttcgatctaa 677
Query: 605 atcttcttccatcggaggaggaagatgctt 634
||||||||||||| ||||||||||| ||||
Sbjct: 678 atcttcttccatcagaggaggaagaagctt 707
>contig12131 length=1114 numreads=23 gene=isogroup07040
status=isotig
Length = 1114
Score = 81.8 bits (41), Expect = 7e-15
Identities = 122/149 (81%)
Strand = Plus / Plus
Query: 103 aagaggccttggggtcgttacgccgccgagatacgggatccggggaagaagagccgggtc 162
|||||||| |||||| | || ||||||||||| | ||||| || || |||||||| |||
Sbjct: 180 aagaggccgtggggtagatatgccgccgagatcagagatcctggcaaaaagagccgagtc 239
Query: 163 tggttaggcacttttgatacggctgaggaagctgctacagcttatgacaaggcggcgcgt 222
||| | ||||| ||||| ||||| |||||||||||| ||||||||| || || |||
Sbjct: 240 tggctcggcacctttgacacggcagaggaagctgctcgtgcttatgacgccgccgctcgt 299
Query: 223 gaattccgtggccctaaggccaagactaa 251
|||||||| ||| |||| |||||||||||
Sbjct: 300 gaattccggggcgctaaagccaagactaa 328