HUGE

Gene/Protein Characteristic Table for KIAA0281

Link to : Rouge \| GTOP \| SWISS-PROT/TrEMBL \| GeneCards\| RefDIC
Features : DNA sequence \| Protein sequence \| Mapping

Product ID :	ORK04883
Accession No. :	D87457
Description :	Engulfment and cell motility protein 1.
HUGO Gene Name :	engulfment and cell motility 1 (ELMO1)
Clone Name :	ha06725 [Vector Info]
Source :	Human adult brain

Features of the cloned DNA sequence	Description

Length: 2109 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis) for :
cloned DNA seq.
Warning for N-terminal truncation:
NO

Warning for coding interruption:
NO

Integrity of 3' end

Length of 3'UTR 1192 bp

Genome contig ID gi89161213r_36760492
PolyA signal sequence
(AATAAA,-19)
+----*----+----*----+----*----+----
CTTAAACATGCTGTGGAATAAAATGGATTGTGATG
Flanking genome sequence
(100000 - 99951)
----+----*----+----*----+----*----+----*----+----*
ATTTGGGGAGCTGGTGTTTTGATTTAGTAACTTAGGTTCTTGCTACTCAG

Ensembl ContigView (Add our DAS server as a DAS source)

Chr f/r start end exon identity class

ContigView(URL based/DAS) 7 r 36860492 36992222 7 99.3 Perfect prediction

Features of the protein sequence	Description

Length: 271 aa

Result of homology search against nr database (FASTA output, Multiple alignment)

Entry	Exp	ID%	Protein	Source
EDL32677	8.3e-102	100.0	engulfment and ...	Mus musculus
EDL32680	1.1e-99	94.0	engulfment and ...	Mus musculus
AAH31782	5.3e-99	93.6	Elmo1 protein [...	Mus musculus
BAC86597	5.3e-99	93.6	unnamed protein...	Homo sapiens
EAW94079	6.9e-99	93.6	engulfment and ...	Homo sapiens

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of homology search against other HUGE database (FASTA output, Multiple alignment)

Entry	Exp	ID%	HUGE_ID
AB058737	4e-73	74.2	KIAA1834

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of motif / domain search (InterProScan and SOSUI)

Motif_DB interpro_ID From To Entry Definition

None - - - - -

Motif_DB	interpro_ID	From	To	Entry	Definition
None	-	-	-	-	-

Prediction of transmembrane (TM) segments

Method No. N terminal transmembrane region C terminal type length

- - - - - - -

Method	No.	N terminal	transmembrane region	C terminal	type	length
-	-	-	-	-	-	-

RH mapping information	Description

Chromosome No.

: 7

Experimental conditions

Panel name	: Genebridge 4
Primer_f	: ACTGCCTTCTTCATTTCCACC
Primer_r	: GCAACAGTCCGTCCTAGAGGC
PCR product length	: 122 bp
PCR conditions	: 95 °C15 sec64 °C60 sec30 cycles

How to obtain KIAA clone(s) Back to the HUGE Protein Database homepage

	cloned DNA seq.
Warning for N-terminal truncation:	NO
Warning for coding interruption:	NO

Length of 3'UTR	1192 bp
Genome contig ID	gi89161213r_36760492
PolyA signal sequence (AATAAA,-19)	+--------+--------+----*----+---- CTTAAACATGCTGTGGAATAAAATGGATTGTGATG
Flanking genome sequence (100000 - 99951)	----+--------+--------+--------+--------+----* ATTTGGGGAGCTGGTGTTTTGATTTAGTAACTTAGGTTCTTGCTACTCAG

	Chr	f/r	start	end	exon	identity	class
ContigView(URL based/DAS)	7	r	36860492	36992222	7	99.3	Perfect prediction

Gene/Protein Characteristic Table for KIAA0281

Features of the cloned DNA sequence

Features of the protein sequence

RH mapping information