Gene/Protein Characteristic Table for KIAA2020
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Product ID ORK04963
Accession No AB095940
Description NUT family member 2A
Clone name ph01249
Vector information
The cDNA fragment was inserted at the SalI-NotI site of the ...
cDNA sequence DNA sequence (5858 bp)
Predicted protein sequence (572 aa)
Source Human brain (hippocampus)
Features of the cloned cDNA sequence
Description

Length: 5858 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

N-terminal truncation Coding interruption
cloned DNA seq No warning No warning

Ensembl ContigView (Add our DAS server as a DAS source)


Chr f/r start end exon identity class
Ensembl gnome browser 10 f 88975237 89120432 8 99.1 Perfect prediction
Ensembl gnome browser 10 f 81453240 81604115 8 99.0 Perfect prediction
Features of the protein sequence
Description

Length: 572 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
CAH70666 9.1e-174 99.1 family with seq...
Homo sapiens
CAQ08562 1.2e-169 98.2 family with seq...
Homo sapiens
Q5VT03 2.3e-169 99.1 Protein FAM22D.
Homo sapiens
NP_001092808 3.9e-167 96.6 hypothetical pr...
Homo sapiens
Q8IVF1 3.9e-167 96.6 Protein FAM22A.
Homo sapiens
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of homology search against HUGE database (FASTA output, Multiple alignment)
No significant homologues
Result of motif / domain search (InterProScan and SOSUI)

Result of InterProScan

Search method interpro_ID From To Entry Definition
None - - - - -

Prediction of transmembrane (TM) segments
Method No. N terminal transmembrane region C terminal type length
SOSUI2 1 182 GGVVCPPPLLLAAAPVVPVMAAQ 204 PRIMARY 23
Expression profile
Description

RT-PCR-ELISA
Experimental conditions
Primer_f GAAGTGGTGCAGGAGTATGTG
Primer_r ATGAATGACGGCCTCCACCTT
PCR conditions 95 °C30 sec55 °C30 sec72 °C60 sec30 cycles

RH mapping information
Description

Chromosome No. 10
Experimental conditions
Panel name genbank
Primer_f -
Primer_r -
PCR product length -
PCR conditions -
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