Gene/Protein Characteristic Table for KIAA1159
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Product ID ORK06216
Accession No AB032985
Description neurexophilin 3
Clone name hj00357
Vector information
The cDNA fragment was inserted at the SalI-NotI site of the ...
cDNA sequence DNA sequence (5194 bp)
Predicted protein sequence (221 aa)
Source Human adult brain
Rouge ID mKIAA1159 by Kazusa Mouse cDNA Project
Features of the cloned cDNA sequence
Description

Length: 5194 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

N-terminal truncation Coding interruption
cloned DNA seq Warning No warning
Integrity of 3' end
Length of 3'UTR 4527 bp
Genome contig ID gi51511734f_44910995
PolyA signal sequence
(AATAAA,-23)
+----*----+----*----+----*----+----
AATGAGTTGCTCAATAAATGTTACTTCCTCCTGTC
Flanking genome sequence
(105195 - 105244)
----+----*----+----*----+----*----+----*----+----*
TTTTTTTTTCTAAGATGGGTTGTTGTTAACCTTGGCCTTGCTCCTGGTGT

Ensembl ContigView (Add our DAS server as a DAS source)


Chr f/r start end exon identity class
Ensembl gnome browser 17 f 45010995 45016188 1 99.0 Perfect prediction
Features of the protein sequence
Description

Length: 221 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
O95157 1.4e-91 100.0 Neurexophilin-3...
Homo sapiens
AAH22541 5.1e-91 99.5 Neurexophilin 3...
Homo sapiens
XP_001093691 2.2e-90 98.2 similar to Neur...
Macaca mulatta
XP_851450 3.6e-89 97.3 similar to Neur...
Canis lupus fam...
XP_001502469 4.7e-88 95.9 similar to Neur...
Equus caballus
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of homology search against HUGE database (FASTA output, Multiple alignment)
No significant homologues
Result of motif / domain search (InterProScan and SOSUI)

Result of InterProScan

Search method interpro_ID From To Entry Definition
HMMPfam IPR010450 1 221 PF06312 Neurexophilin
Expression profile
Description

RT-PCR-ELISA
Experimental conditions
Primer_f TTCCAAAGATTCCGAGTCCTG
Primer_r AGGTCTCTGCTGGCATTTGTG
PCR conditions 95 °C30 sec55 °C30 sec72 °C60 sec30 cycles

RH mapping information
Description

Chromosome No. 17
Experimental conditions
Panel name GeneBridge 4
Primer_f TTCCAAAGATTCCGAGTCCTG
Primer_r AGGTCTCTGCTGGCATTTGTG
PCR product length 186 bp
PCR conditions 95 °C15 sec64 °C60 sec30 cycles
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